##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088101_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1468656 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.591278012005535 31.0 31.0 34.0 30.0 34.0 2 31.79456319246985 31.0 31.0 34.0 30.0 34.0 3 31.867215331568456 31.0 31.0 34.0 30.0 34.0 4 35.57223747426218 37.0 35.0 37.0 33.0 37.0 5 35.46302333562114 37.0 35.0 37.0 33.0 37.0 6 35.49441938752165 37.0 35.0 37.0 33.0 37.0 7 35.359577736379386 37.0 35.0 37.0 33.0 37.0 8 35.3701145809502 37.0 35.0 37.0 33.0 37.0 9 36.941919687115295 39.0 37.0 39.0 33.0 39.0 10 36.779217189049035 39.0 37.0 39.0 32.0 39.0 11 36.837537176847405 39.0 37.0 39.0 32.0 39.0 12 36.70998586462725 39.0 35.0 39.0 32.0 39.0 13 36.74104895904827 39.0 35.0 39.0 32.0 39.0 14 37.730962866729854 39.0 37.0 41.0 32.0 41.0 15 37.739582992886014 39.0 37.0 41.0 32.0 41.0 16 37.6151263468096 39.0 36.0 41.0 32.0 41.0 17 37.62898051007179 39.0 36.0 41.0 32.0 41.0 18 37.61089731019381 39.0 36.0 41.0 32.0 41.0 19 37.63934032203593 39.0 37.0 41.0 32.0 41.0 20 37.55027930298177 39.0 36.0 41.0 32.0 41.0 21 37.46952043228639 39.0 36.0 41.0 32.0 41.0 22 37.36241774792736 39.0 36.0 41.0 31.0 41.0 23 37.16815510235208 39.0 36.0 41.0 31.0 41.0 24 37.02416358902289 39.0 36.0 40.0 31.0 41.0 25 36.876045173274065 39.0 36.0 40.0 30.0 41.0 26 37.01039385669619 39.0 36.0 40.0 31.0 41.0 27 36.94430009478054 39.0 36.0 41.0 31.0 41.0 28 36.854650101861836 39.0 35.0 41.0 30.0 41.0 29 36.74529501803009 39.0 35.0 40.0 30.0 41.0 30 36.54821006416751 39.0 35.0 40.0 30.0 41.0 31 36.37539423799719 38.0 35.0 40.0 30.0 41.0 32 36.23149056007669 38.0 35.0 40.0 30.0 41.0 33 36.060541066117594 38.0 35.0 40.0 29.0 41.0 34 35.92506414027519 38.0 35.0 40.0 29.0 41.0 35 35.72517049601813 38.0 35.0 40.0 27.0 41.0 36 35.617979976250396 38.0 34.0 40.0 27.0 41.0 37 35.46294299005349 38.0 34.0 40.0 27.0 41.0 38 35.363444537046114 38.0 34.0 40.0 26.0 41.0 39 35.280168398862635 38.0 34.0 40.0 25.0 41.0 40 35.11213449575666 38.0 34.0 40.0 25.0 41.0 41 34.982485347147325 38.0 34.0 40.0 24.0 41.0 42 34.78008124434857 38.0 33.0 40.0 23.0 41.0 43 34.44496532884487 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 4.0 15 4.0 16 24.0 17 43.0 18 94.0 19 201.0 20 492.0 21 1004.0 22 1864.0 23 3207.0 24 5413.0 25 8272.0 26 12373.0 27 17371.0 28 23817.0 29 31266.0 30 40232.0 31 50043.0 32 62108.0 33 77714.0 34 94860.0 35 117470.0 36 150399.0 37 204361.0 38 271052.0 39 294964.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.68399952065017 21.692758549313112 14.04692453508514 23.576317394951573 2 18.509780370624572 23.22238836051465 35.63482530967088 22.633005959189898 3 19.25379394494014 24.74017060496127 33.00391650597553 23.002118944123062 4 13.613535096033381 16.424472442832087 36.79813380396771 33.16385865716682 5 12.294982623568758 38.527129566079466 35.623113921844194 13.554773888507587 6 31.997622315913326 37.76561699948797 13.695855258140776 16.54090542645793 7 25.668638537547256 33.22309649094138 21.889809458443636 19.21845551306773 8 26.36580656055604 35.26864017169439 19.32447080868495 19.041082459064615 9 24.455352376594654 14.655576254752646 22.127305509254718 38.761765859397975 10 15.975762874355873 27.647726901330195 34.233339869921885 22.14317035439204 11 32.853574969223565 22.52542460589818 23.807140678280007 20.81385974659825 12 20.695928794762015 27.241232800601367 31.17748472072425 20.885353683912367 13 31.11988103408831 21.340463662014795 26.59894488566417 20.940710418232726 14 20.391228442875665 22.902163610811517 27.69082753211099 29.01578041420183 15 22.26682082121341 29.595289843230816 25.773292043882297 22.364597291673476 16 21.71781547210511 28.80742665402926 26.54209018313342 22.932667690732206 17 21.51273000620976 26.917126951444043 27.038258108093387 24.531884934252812 18 23.04290453312416 25.880124413068817 29.655753287359328 21.421217766447693 19 22.672021222124172 24.872808881044982 30.62296412502315 21.832205771807693 20 23.639708686036755 24.563614624527457 30.64250580122234 21.154170888213443 21 22.553068928326304 25.335544879127582 31.054515148543977 21.056871044002136 22 21.08397065071739 25.620499286422415 30.735856456515343 22.559673606344848 23 22.35819688204726 25.84070061334989 31.613121112091598 20.187981392511247 24 22.24857284483228 25.90130023640662 29.148214421893215 22.701912496867884 25 22.04811746249632 26.29288274449565 30.156074669629916 21.50292512337811 26 21.929573705483108 26.95021843100086 29.924298133803966 21.195909729712064 27 20.751625976402917 26.987327188940093 29.61884879781242 22.642198036844572 28 21.322215685633665 26.37295595428746 29.91755727685721 22.387271083221666 29 21.67948110381192 26.25005447157129 29.165032519528054 22.905431905088733 30 21.77603196391803 26.38432689479361 30.71495299103398 21.124688150254382 31 22.55688193831639 26.063080803128848 30.655783246723534 20.724254011831224 32 21.827575688248302 26.027810460720552 29.774841760085412 22.369772090945737 33 21.697252453944284 25.92036528635705 30.449608349402446 21.932773910296216 34 20.76156703816278 26.654914425161508 30.9927580045974 21.59076053207831 35 20.479404298896405 28.578714144088202 29.640977873647746 21.30090368336765 36 22.586637034131886 26.1356641718687 29.657864060746697 21.619834733252716 37 21.674851020252532 26.970304822912922 29.635803074375485 21.719041082459064 38 21.619902822716824 25.387156692921963 30.93202220261246 22.060918281748755 39 21.1899178568705 25.152656578531662 31.661873168393416 21.99555239620442 40 19.848555413929468 25.860855094726066 31.31536588554433 22.97522360580013 41 21.49414158250809 24.950090422808337 31.18075301500147 22.375014979682103 42 20.088979311697226 27.034581277031517 30.712978396574826 22.16346101469643 43 20.642070028652046 26.89527023346516 29.64165876828883 22.821000969593968 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 75.0 1 126.5 2 178.0 3 407.0 4 636.0 5 636.0 6 1135.0 7 1634.0 8 1860.0 9 2086.0 10 3346.5 11 4607.0 12 4607.0 13 8878.0 14 13149.0 15 21370.5 16 29592.0 17 28225.5 18 26859.0 19 26859.0 20 29710.0 21 32561.0 22 27119.5 23 21678.0 24 24484.5 25 27291.0 26 27291.0 27 30459.0 28 33627.0 29 36581.0 30 39535.0 31 43955.5 32 48376.0 33 48376.0 34 54064.0 35 59752.0 36 65114.0 37 70476.0 38 74258.0 39 78040.0 40 78040.0 41 80740.5 42 83441.0 43 87155.0 44 90869.0 45 96614.0 46 102359.0 47 102359.0 48 130721.0 49 159083.0 50 146170.5 51 133258.0 52 121830.0 53 110402.0 54 110402.0 55 96709.5 56 83017.0 57 70293.5 58 57570.0 59 51559.0 60 45548.0 61 45548.0 62 40362.0 63 35176.0 64 30443.0 65 25710.0 66 21754.5 67 17799.0 68 17799.0 69 15130.5 70 12462.0 71 10562.0 72 8662.0 73 7128.5 74 5595.0 75 5595.0 76 4453.0 77 3311.0 78 2626.5 79 1942.0 80 1516.5 81 1091.0 82 1091.0 83 837.5 84 584.0 85 430.5 86 277.0 87 217.5 88 158.0 89 158.0 90 136.5 91 115.0 92 82.5 93 50.0 94 31.5 95 13.0 96 13.0 97 10.0 98 7.0 99 6.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1468656.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.07105702699367 #Duplication Level Percentage of deduplicated Percentage of total 1 78.88606802415423 41.07680946721037 2 12.170274310321274 12.674380952937902 3 3.863487834276077 6.035276860250577 4 1.6784707947320885 3.495989938825519 5 0.877215010518056 2.283875641881027 6 0.5040669232579844 1.5748378503832645 7 0.34117556335017085 1.2435760550796406 8 0.2337765809265033 0.9738394941599643 9 0.1777685275599947 0.8330935622563062 >10 1.09390017041652 10.793129618641652 >50 0.1006962013940206 3.6346127605145244 >100 0.06301283262951313 6.031696438559552 >500 0.005895132348848011 2.1378460704442315 >1k 0.0036680823503943186 4.049560688319139 >5k 1.3100294108551138E-4 0.368563571110727 >10k+ 3.9300882325653415E-4 2.792911029425596 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14684 0.9998256909718818 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14679 0.9994852436513383 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11580 0.7884759943785338 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5403 0.3678873745792071 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4546 0.3095347038380669 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4442 0.302453399570764 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4410 0.30027453671928617 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3993 0.27188123018596594 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3978 0.2708598882243357 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3714 0.2528842696996437 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2233 0.1520437733546862 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2164 0.14734560033118715 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2143 0.14591572158490485 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1932 0.131548844657973 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1861 0.1267144927062566 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1750 0.11915656219019294 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1739 0.11840757808499744 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1676 0.1141179418461505 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1662 0.11316468934862896 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1660 0.11302851042041158 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1632 0.11112200542536851 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1543 0.10506204311969583 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 6.808946410868168E-5 0.0 0.0 6.808946410868168E-5 0.0 3 6.808946410868168E-5 0.0 0.0 6.808946410868168E-5 0.0 4 6.808946410868168E-5 0.0 0.0 6.808946410868168E-5 0.0 5 6.808946410868168E-5 0.0 0.0 1.3617892821736336E-4 0.0 6 6.808946410868168E-5 0.0 0.0 1.3617892821736336E-4 0.0 7 6.808946410868168E-5 0.0 0.0 1.3617892821736336E-4 0.0 8 1.3617892821736336E-4 0.0 0.0 1.3617892821736336E-4 0.0 9 1.3617892821736336E-4 6.808946410868168E-5 0.0 3.404473205434084E-4 0.0 10 1.3617892821736336E-4 6.808946410868168E-5 0.0 4.085367846520901E-4 0.0 11 1.3617892821736336E-4 6.808946410868168E-5 0.0 8.851630334128618E-4 0.0 12 1.3617892821736336E-4 6.808946410868168E-5 0.0 0.0012936998180649519 0.0 13 1.3617892821736336E-4 6.808946410868168E-5 0.0 0.0012936998180649519 0.0 14 2.723578564347267E-4 6.808946410868168E-5 0.0 0.0014298787462823153 0.0 15 2.723578564347267E-4 6.808946410868168E-5 0.0 0.001906504995043087 0.0 16 2.723578564347267E-4 6.808946410868168E-5 0.0 0.0026554891002385857 0.0 17 2.723578564347267E-4 6.808946410868168E-5 0.0 0.0036768310618688106 0.0 18 2.723578564347267E-4 6.808946410868168E-5 0.0 0.004153457310629582 0.0 19 3.404473205434084E-4 6.808946410868168E-5 0.0 0.0050386203440424444 0.0 20 3.404473205434084E-4 6.808946410868168E-5 0.0 0.007966467300715756 0.0 21 3.404473205434084E-4 6.808946410868168E-5 0.0 0.014094519070497108 0.0 22 3.404473205434084E-4 6.808946410868168E-5 0.0 0.022265254763538907 0.0 23 3.404473205434084E-4 1.3617892821736336E-4 0.0 0.02791668028455949 0.0 24 3.404473205434084E-4 1.3617892821736336E-4 0.0 0.03445326883899293 0.0 25 3.404473205434084E-4 1.3617892821736336E-4 0.0 0.03915144186249197 0.0 26 3.404473205434084E-4 1.3617892821736336E-4 0.0 0.047322177555533765 0.0 27 3.404473205434084E-4 1.3617892821736336E-4 0.0 0.1025427329476746 0.0 28 3.404473205434084E-4 1.3617892821736336E-4 0.0 0.20549400268000131 0.0 29 3.404473205434084E-4 1.3617892821736336E-4 0.0 0.32880402218082383 0.0 30 3.404473205434084E-4 1.3617892821736336E-4 0.0 0.5312339989759345 0.0 31 3.404473205434084E-4 1.3617892821736336E-4 0.0 0.7810542427906876 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3700 0.0 29.8 1 ATAACGC 40 0.0019314411 23.125002 3 GTATTGG 545 0.0 20.027523 1 TTAACGG 150 0.0 19.733334 35 GTATTAG 295 0.0 18.186441 1 GTATCAA 6135 0.0 17.881824 2 ATTGGAC 615 0.0 16.845528 3 CCGAAAT 100 5.8800306E-6 16.65 24 TGGACCC 875 0.0 16.491428 5 GTCGGTT 180 1.0913936E-11 16.444445 12 GGACCCT 865 0.0 16.254335 6 TATGCCG 115 1.2426935E-6 16.086956 10 CGACGAA 150 4.6729838E-9 16.033333 10 TTGGACC 860 0.0 15.918604 4 GTAAGAC 70 0.0025929532 15.857143 3 CGAACTA 200 3.6379788E-12 15.724999 24 TCCGACG 95 7.0618116E-5 15.578948 23 ACGACAT 95 7.0618116E-5 15.578948 27 GACCCTC 930 0.0 15.118279 7 TAAGCCG 135 3.974037E-7 15.074073 10 >>END_MODULE