##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088100_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1787784 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.503130132051748 31.0 31.0 34.0 30.0 34.0 2 31.697048972359077 31.0 31.0 34.0 30.0 34.0 3 31.744832709096848 31.0 31.0 34.0 30.0 34.0 4 35.45344292151625 37.0 35.0 37.0 33.0 37.0 5 35.3568468002846 37.0 35.0 37.0 33.0 37.0 6 35.409286580481755 37.0 35.0 37.0 33.0 37.0 7 35.25745447995955 37.0 35.0 37.0 32.0 37.0 8 35.320921878705704 37.0 35.0 37.0 32.0 37.0 9 36.83265875519638 39.0 37.0 39.0 32.0 39.0 10 36.676086708461426 39.0 35.0 39.0 32.0 39.0 11 36.73101448497134 39.0 35.0 39.0 32.0 39.0 12 36.6029604247493 39.0 35.0 39.0 32.0 39.0 13 36.63879529070626 39.0 35.0 39.0 32.0 39.0 14 37.55574946414108 39.0 36.0 41.0 32.0 41.0 15 37.56599846513897 39.0 36.0 41.0 32.0 41.0 16 37.43566952159769 39.0 36.0 41.0 32.0 41.0 17 37.5076351505551 39.0 36.0 41.0 32.0 41.0 18 37.50516673155146 39.0 36.0 41.0 32.0 41.0 19 37.570609201111544 39.0 37.0 41.0 32.0 41.0 20 37.50042063247014 39.0 36.0 41.0 32.0 41.0 21 37.42792361940816 39.0 36.0 41.0 32.0 41.0 22 37.31200133796924 39.0 36.0 41.0 31.0 41.0 23 37.097145404590265 39.0 36.0 40.0 31.0 41.0 24 36.938712394785945 39.0 36.0 40.0 31.0 41.0 25 36.775319613555105 39.0 35.0 40.0 30.0 41.0 26 36.91203747208835 39.0 36.0 40.0 31.0 41.0 27 36.82351055832248 39.0 35.0 40.0 30.0 41.0 28 36.72958422270252 39.0 35.0 40.0 30.0 41.0 29 36.621848053232384 39.0 35.0 40.0 30.0 41.0 30 36.351737681957104 38.0 35.0 40.0 30.0 41.0 31 36.10479342023421 38.0 35.0 40.0 30.0 41.0 32 35.92578857401118 38.0 35.0 40.0 29.0 41.0 33 35.72114975858381 38.0 35.0 40.0 29.0 41.0 34 35.57214685890465 38.0 34.0 40.0 27.0 41.0 35 35.34913054373459 38.0 34.0 40.0 27.0 41.0 36 35.23320266877878 38.0 34.0 40.0 26.0 41.0 37 35.02782494977022 38.0 34.0 40.0 25.0 41.0 38 34.87916996684163 38.0 33.0 40.0 24.0 41.0 39 34.732822309630244 38.0 33.0 40.0 24.0 41.0 40 34.50551464830203 38.0 33.0 40.0 23.0 41.0 41 34.294823647599486 38.0 33.0 40.0 21.0 41.0 42 34.02986714278683 38.0 33.0 40.0 20.0 41.0 43 33.665585999203486 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 3.0 14 4.0 15 10.0 16 27.0 17 60.0 18 163.0 19 349.0 20 715.0 21 1541.0 22 2877.0 23 4841.0 24 7743.0 25 12383.0 26 17403.0 27 24312.0 28 33116.0 29 42184.0 30 53039.0 31 65162.0 32 79319.0 33 98175.0 34 119272.0 35 144398.0 36 186112.0 37 253676.0 38 320880.0 39 320018.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.789370527983245 22.658553829769144 15.685172257946151 21.86690338430146 2 18.778498968555486 24.575787679048474 35.28944212499944 21.356271227396597 3 19.353904051048673 24.997650722906123 34.36377101484296 21.284674211202248 4 13.552979554577064 17.271269907326612 36.312160753200615 32.863589784895716 5 11.600842159902985 39.59879940753469 35.01854810200785 13.781810330554475 6 30.952844415208997 38.36956813574795 13.1275925950786 17.549994853964463 7 24.047480008770634 35.046403816120964 21.43670600027744 19.469410174830966 8 26.680236538642255 35.38811176294228 18.787952012099897 19.143699686315575 9 23.69575966671589 14.996274717751138 22.98566269750708 38.32230291802589 10 16.347500592912787 28.891969052189747 33.06836843824534 21.692161916652122 11 31.900442111575 23.2755746779253 23.94472710349796 20.87925610700174 12 20.727392123433255 28.647588299257627 31.07881041557593 19.546209161733184 13 31.61192851037933 22.0020986875372 27.125872029283183 19.260100772800293 14 19.610478670801395 24.388908279747444 29.126617085732953 26.87399596371821 15 21.674877949461457 30.52281483669168 26.961087021698372 20.841220192148494 16 20.411414354306785 29.459151664854367 27.985204029122084 22.144229951716763 17 20.671624760038128 27.79401762181561 27.917242798906354 23.61711481923991 18 22.147697932188677 25.878070281421024 31.28414842061457 20.69008336577573 19 21.82126028647756 25.02287748408085 32.94670944588384 20.209152783557744 20 22.7729971853423 24.37212772907689 32.91124654880008 19.94362853678073 21 21.366115817123323 25.590731318772292 33.65798105363959 19.3851718104648 22 19.691025314020038 25.802389997896835 33.13935016758177 21.36723452050136 23 21.12111977733328 26.0661802544379 34.04930349527683 18.76339647295199 24 20.793171882061813 26.090791728754702 31.53848563361122 21.57755075557226 25 20.55169975791259 26.743331409163524 32.61971244848371 20.08525638444018 26 20.3752243000273 27.570444751714973 32.33147852313255 19.722852425125183 27 19.074675687890707 27.46444760664599 32.063325323417146 21.397551382046153 28 19.65058418690401 27.016015357559976 32.21983192600448 21.11356852953153 29 19.93792314955274 26.59879493272118 31.43808200543242 22.025199912293655 30 20.36163205398415 26.890049357193043 33.34686964420758 19.401448944615233 31 21.35973920786851 26.77644502915341 32.74081208915619 19.12300367382189 32 20.66508034527661 26.64427022503837 31.91112572883525 20.779523700849765 33 20.021266551216478 26.546048068446748 32.72643675074841 20.706248629588362 34 19.02595615577721 27.152497169680455 33.60596134656088 20.215585327981454 35 18.608847601276217 29.317020400674803 32.052585770987996 20.021546227060988 36 21.30716014910079 26.868178706152424 31.718876553319642 20.105784591427152 37 20.362582951855483 27.72818192801815 31.722064857947046 20.187170262179325 38 20.003199491661185 26.03071735735413 33.136833084981184 20.8292500660035 39 19.47142384091143 25.75976739919364 34.001590796203566 20.767217963691365 40 18.242360374631385 26.302226667203644 33.47361873693914 21.98179422122583 41 19.93697225168141 25.429917708179513 33.45062938252049 21.182480657618594 42 18.628201169716252 27.68723738438201 32.52920934520054 21.1553521007012 43 19.09609885758011 27.746304922742343 31.42577626827402 21.731819951403526 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 174.0 1 262.0 2 350.0 3 639.0 4 928.0 5 928.0 6 1814.0 7 2700.0 8 3172.5 9 3645.0 10 6047.0 11 8449.0 12 8449.0 13 16707.5 14 24966.0 15 41308.5 16 57651.0 17 53179.0 18 48707.0 19 48707.0 20 53397.5 21 58088.0 22 46308.5 23 34529.0 24 38371.0 25 42213.0 26 42213.0 27 45183.0 28 48153.0 29 50343.5 30 52534.0 31 56783.0 32 61032.0 33 61032.0 34 66872.0 35 72712.0 36 78492.0 37 84272.0 38 87951.0 39 91630.0 40 91630.0 41 93519.0 42 95408.0 43 98998.0 44 102588.0 45 110741.5 46 118895.0 47 118895.0 48 160877.0 49 202859.0 50 181644.5 51 160430.0 52 140820.0 53 121210.0 54 121210.0 55 104633.5 56 88057.0 57 73379.5 58 58702.0 59 51706.0 60 44710.0 61 44710.0 62 38968.0 63 33226.0 64 28416.0 65 23606.0 66 19893.5 67 16181.0 68 16181.0 69 13718.5 70 11256.0 71 9123.5 72 6991.0 73 5772.5 74 4554.0 75 4554.0 76 3648.0 77 2742.0 78 2131.0 79 1520.0 80 1234.5 81 949.0 82 949.0 83 730.5 84 512.0 85 400.0 86 288.0 87 230.0 88 172.0 89 172.0 90 142.5 91 113.0 92 79.5 93 46.0 94 34.5 95 23.0 96 23.0 97 15.0 98 7.0 99 6.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1787784.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.7979033511473 #Duplication Level Percentage of deduplicated Percentage of total 1 76.52711709101423 35.047815122762024 2 12.945782339518392 11.857793767805056 3 4.499478830775978 6.182000898672344 4 2.002309039920239 3.6680622355758254 5 1.0647818482637876 2.438238808842047 6 0.6267899923462014 1.7223400494562613 7 0.39934703845654984 1.2802479949559982 8 0.270133522772791 0.9897239174282585 9 0.20013094208188362 0.8249019788736147 >10 1.2280109885634662 10.8576810439329 >50 0.13927930687364282 4.465227347310955 >100 0.08435183304405679 7.450514062047953 >500 0.005753918032663042 1.8997921212776239 >1k 0.005753918032663042 4.952052282127363 >5k 4.896951517160035E-4 1.4085284402885276 >10k+ 4.896951517160035E-4 4.955079928643388 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29172 1.6317407472043601 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 27516 1.53911210750292 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21451 1.1998653081132844 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10238 0.5726642592169972 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7046 0.39411920008233653 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6553 0.3665431618137314 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5885 0.32917846898730496 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5638 0.31536248226855146 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4904 0.2743060682946038 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4296 0.24029748560228753 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3828 0.21411982655622827 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3512 0.1964443131832481 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3225 0.18039091970842117 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2963 0.16573590545614011 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2903 0.16237979532202995 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2675 0.14962657681241134 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2493 0.1394463760722772 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2269 0.1269168982382659 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2229 0.12467949148219248 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2226 0.12451168597548697 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2094 0.11712824368044462 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2091 0.1169604381737391 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1971 0.1102482179055188 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1967 0.11002447722991145 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1876 0.10493437685984437 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 5.593516890183602E-5 0.0 0.0 0.0 0.0 6 5.593516890183602E-5 0.0 0.0 0.0 0.0 7 5.593516890183602E-5 0.0 0.0 0.0 0.0 8 1.6780550670550805E-4 0.0 0.0 0.0 0.0 9 1.6780550670550805E-4 0.0 5.593516890183602E-5 1.1187033780367204E-4 0.0 10 1.6780550670550805E-4 0.0 5.593516890183602E-5 3.356110134110161E-4 0.0 11 1.6780550670550805E-4 0.0 5.593516890183602E-5 6.712220268220322E-4 0.0 12 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.0011187033780367204 0.0 13 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.0012305737158403924 0.0 14 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.0013424440536440644 0.0 15 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.0019017957426624246 0.0 16 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.002517082600582621 0.0 17 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.003579850809717505 0.0 18 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.004139202498735865 0.0 19 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.0053697762145762575 0.0 20 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.008725886348686419 0.0 21 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.013927857056557169 0.0 22 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.020751947662581163 0.0 23 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.025842048032648238 0.0 24 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.03244239796306489 0.0 25 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.03842746103556134 0.0 26 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.047377088059855105 0.0 27 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.11036008824332245 0.0 28 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.24264676269616464 0.0 29 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.405921520720624 0.0 30 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.6727322763823818 0.0 31 1.6780550670550805E-4 0.0 5.593516890183602E-5 0.9817740845650258 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7010 0.0 28.50214 1 GTATTGG 615 0.0 21.357723 1 CCCGTAT 65 6.904872E-5 19.923077 1 TACGTTA 95 1.6774175E-7 19.473684 19 CGCCGGA 145 7.2759576E-12 19.13793 14 TATACCG 135 1.1532393E-9 17.814814 5 CGTATAC 85 2.724485E-5 17.411764 3 GTATCAA 11520 0.0 17.311632 2 CGACCGC 140 1.87174E-9 17.178572 10 TAAGCCG 110 7.81356E-7 16.818182 10 AGCCGTC 135 2.2215318E-8 16.444443 12 ATTGGAC 775 0.0 16.232258 3 ACCGCCG 160 6.2937033E-10 16.1875 12 GGACCCT 910 0.0 16.06044 6 TGGACCC 1010 0.0 15.752475 5 GACCCTC 905 0.0 15.740332 7 TTGGACC 1020 0.0 15.598039 4 TCAAGAC 305 0.0 15.163934 3 CCGACCG 160 1.0975782E-8 15.03125 9 TCGGCCG 125 2.9607854E-6 14.800001 27 >>END_MODULE