##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088099_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2735461 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50895552888526 31.0 31.0 34.0 30.0 34.0 2 31.699158935184965 31.0 31.0 34.0 30.0 34.0 3 31.751411553664994 31.0 31.0 34.0 30.0 34.0 4 35.46961919764164 37.0 35.0 37.0 33.0 37.0 5 35.364785679634984 37.0 35.0 37.0 33.0 37.0 6 35.409748484807494 37.0 35.0 37.0 33.0 37.0 7 35.26643516394494 37.0 35.0 37.0 32.0 37.0 8 35.296485309057594 37.0 35.0 37.0 32.0 37.0 9 36.8307294456035 39.0 37.0 39.0 32.0 39.0 10 36.67204906229699 39.0 35.0 39.0 32.0 39.0 11 36.744024133409326 39.0 35.0 39.0 32.0 39.0 12 36.61595138808413 39.0 35.0 39.0 32.0 39.0 13 36.65872114426051 39.0 35.0 39.0 32.0 39.0 14 37.585852256712855 39.0 36.0 41.0 32.0 41.0 15 37.60087129737913 39.0 36.0 41.0 32.0 41.0 16 37.4632959490192 39.0 36.0 41.0 32.0 41.0 17 37.52242345988483 39.0 36.0 41.0 32.0 41.0 18 37.51619928048691 39.0 36.0 41.0 32.0 41.0 19 37.56648988963835 39.0 36.0 41.0 32.0 41.0 20 37.493002459183295 39.0 36.0 41.0 32.0 41.0 21 37.41498453094378 39.0 36.0 41.0 32.0 41.0 22 37.33031690088069 39.0 36.0 41.0 31.0 41.0 23 37.126429512246744 39.0 36.0 40.0 31.0 41.0 24 36.9850204407959 39.0 36.0 40.0 31.0 41.0 25 36.833195574713 39.0 35.0 40.0 30.0 41.0 26 36.92723164395325 39.0 36.0 40.0 31.0 41.0 27 36.841885883220414 39.0 35.0 40.0 31.0 41.0 28 36.73824887285909 39.0 35.0 40.0 30.0 41.0 29 36.62502371629498 39.0 35.0 40.0 30.0 41.0 30 36.381048020790644 38.0 35.0 40.0 30.0 41.0 31 36.17240640608658 38.0 35.0 40.0 30.0 41.0 32 36.00598326936483 38.0 35.0 40.0 30.0 41.0 33 35.83118055786575 38.0 35.0 40.0 29.0 41.0 34 35.69019115973505 38.0 34.0 40.0 28.0 41.0 35 35.469695967151424 38.0 34.0 40.0 27.0 41.0 36 35.3386039866772 38.0 34.0 40.0 26.0 41.0 37 35.165068337658624 38.0 34.0 40.0 25.0 41.0 38 35.02111051848299 38.0 34.0 40.0 25.0 41.0 39 34.91185507671285 38.0 33.0 40.0 24.0 41.0 40 34.68796996191867 38.0 33.0 40.0 23.0 41.0 41 34.51596348842115 38.0 33.0 40.0 23.0 41.0 42 34.27339413722221 38.0 33.0 40.0 21.0 41.0 43 33.909358970937625 38.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 1.0 12 2.0 13 1.0 14 4.0 15 10.0 16 39.0 17 99.0 18 208.0 19 501.0 20 1037.0 21 2115.0 22 3903.0 23 6780.0 24 11232.0 25 17280.0 26 25533.0 27 35727.0 28 48831.0 29 63549.0 30 80257.0 31 99376.0 32 121856.0 33 149574.0 34 183350.0 35 221719.0 36 284573.0 37 380484.0 38 483602.0 39 513817.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.16642898582725 22.090170541638138 15.112260785293593 22.631139687241017 2 18.774020174296034 23.912313134787887 35.356014945926844 21.957651744989235 3 19.387189216004177 24.580792780449073 33.851771237096784 22.180246766449972 4 13.535488168173481 16.74825559567473 36.126671153418016 33.58958508273377 5 11.887246793136514 39.10021016567226 35.17520447193361 13.837338569257613 6 31.47856979134413 37.67299186499095 13.253780624179983 17.594657719484943 7 24.754620884743012 34.30730688538422 21.4264432942016 19.511628935671173 8 26.708295237987308 34.9298710528134 18.958413225412464 19.403420483786828 9 23.884054643805925 14.771440718767332 22.734741968538394 38.60976266888835 10 16.27159005374231 28.320601171064038 33.45841889173342 21.94938988346023 11 32.31480909433547 22.732109871060125 23.93282156097272 21.020259473631683 12 20.965460666410525 28.03414122884589 30.97569294535729 20.024705159386297 13 31.658027659688802 21.52598775855331 27.019760106249002 19.79622447550888 14 19.94811843415059 23.69611557247572 28.718523130104945 27.637242863268753 15 21.82275674922801 30.065133445514302 26.70760065670832 21.404509148549366 16 21.005673266772952 28.902733396674275 27.512766586692333 22.578826749860443 17 21.02632792059547 27.220969335698808 27.595019632888206 24.15768311081752 18 22.642362658433075 25.552694774299468 30.726155481653734 21.078787085613722 19 22.161127502823106 24.70625609357984 32.26183813258533 20.870778271011723 20 23.174923714869266 24.071226020038306 32.3327950937703 20.421055171322127 21 21.870426959112194 25.127611031559216 32.96464471619226 20.03731729313633 22 20.093614933643725 25.451066566110796 32.50201702747727 21.95330147276821 23 21.627506296013724 25.611003044824987 33.42350704323695 19.337983615924337 24 21.33764656121948 25.678487099615023 30.858820505940315 22.125045833225183 25 21.18626439930966 26.221064749232397 32.013945729805684 20.578725121652255 26 20.85937251527256 27.050102341067923 31.759399969511538 20.331125174147978 27 19.508704382917543 27.01606785839754 31.446911507786073 22.028316250898843 28 20.237027689299904 26.392077971500967 31.61145415708723 21.7594401821119 29 20.582417369503712 26.08002819268854 30.809176222947432 22.52837821486031 30 20.829432406457265 26.49637483407733 32.61779275961164 20.05639999985377 31 21.95523898896749 26.211157826779473 32.15611555054157 19.677487633711465 32 21.13157526281676 26.194195420808413 31.134605830607708 21.539623485767116 33 20.646136062623448 26.096990598659602 31.95918347949395 21.297689859223 34 19.611977652030134 26.741123342646816 32.89525970211237 20.751639303210684 35 19.291446670232183 28.914431607688794 31.327333857071988 20.46678786500703 36 21.88150370266657 26.309166900935526 31.083901397241636 20.725427999156267 37 20.911941351019077 27.242135786253215 30.990352266034865 20.855570596692843 38 20.62851563228282 25.598573695622058 32.425613086788665 21.347297585306464 39 20.104618563379262 25.309371985197377 33.25315184533795 21.33285760608541 40 18.768390410245292 26.01517623537678 32.68268127383282 22.533752080545106 41 20.584208658065315 25.019950933316178 32.782554750369314 21.613285658249197 42 19.157136585021682 27.401158342231895 31.81196880525805 21.62973626748837 43 19.664948613780272 27.344422018811454 30.79575983719015 22.194869530218124 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 219.0 1 371.5 2 524.0 3 976.0 4 1428.0 5 1428.0 6 2664.0 7 3900.0 8 4473.5 9 5047.0 10 8232.0 11 11417.0 12 11417.0 13 22540.0 14 33663.0 15 55915.0 16 78167.0 17 72768.5 18 67370.0 19 67370.0 20 73446.0 21 79522.0 22 63279.5 23 47037.0 24 51685.0 25 56333.0 26 56333.0 27 61335.0 28 66337.0 29 69551.5 30 72766.0 31 79500.5 32 86235.0 33 86235.0 34 95344.0 35 104453.0 36 114744.0 37 125035.0 38 132116.5 39 139198.0 40 139198.0 41 143154.5 42 147111.0 43 154314.5 44 161518.0 45 174862.5 46 188207.0 47 188207.0 48 253124.5 49 318042.0 50 286496.5 51 254951.0 52 225342.5 53 195734.0 54 195734.0 55 169384.0 56 143034.0 57 119177.0 58 95320.0 59 85251.5 60 75183.0 61 75183.0 62 66260.0 63 57337.0 64 49260.5 65 41184.0 66 34524.5 67 27865.0 68 27865.0 69 23625.5 70 19386.0 71 16119.5 72 12853.0 73 10414.0 74 7975.0 75 7975.0 76 6460.0 77 4945.0 78 3804.0 79 2663.0 80 2157.5 81 1652.0 82 1652.0 83 1254.0 84 856.0 85 673.5 86 491.0 87 374.0 88 257.0 89 257.0 90 214.0 91 171.0 92 107.0 93 43.0 94 30.0 95 17.0 96 17.0 97 12.0 98 7.0 99 7.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2735461.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.09771626886283 #Duplication Level Percentage of deduplicated Percentage of total 1 73.67997854276815 31.017588313893558 2 13.52962960310195 11.391330165083865 3 5.241481742302624 6.61963233647642 4 2.51574488436153 4.236284573867794 5 1.3418939210501584 2.82453347756407 6 0.8348859125585367 2.108807415825594 7 0.5233767338942967 1.542307567164436 8 0.37439194087176425 1.2608836560134722 9 0.255466853898686 0.9679114018373328 >10 1.4419141080590032 11.489618767423119 >50 0.14399454591310124 4.233993467893347 >100 0.10256432780426804 8.161951803412549 >500 0.007381864439942931 2.081687393149758 >1k 0.006339718871950338 5.453575669775347 >5k 5.210727839959181E-4 1.7800311877213753 >10k+ 4.342273199965985E-4 4.829862802897951 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39586 1.4471418163154217 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 38439 1.4052110412102385 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 30013 1.0971825224340612 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13735 0.5021091508890092 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 10335 0.3778156588596949 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9588 0.3505076475226662 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 9423 0.34447575746830245 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 8465 0.3094542382435721 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8021 0.2932229704609205 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7350 0.26869328423984107 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 5841 0.21352890792447782 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4679 0.17104977917798864 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4512 0.1649447753047841 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4383 0.16022893398955423 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4356 0.15924189743520378 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4292 0.15690225523229906 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3901 0.1426085036489279 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3543 0.12952113007642954 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3522 0.1287534349786014 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3218 0.11764013451480389 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3196 0.1168358825075554 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3134 0.11456935412349142 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3101 0.11336297611261867 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3001 0.10970728517058002 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2967 0.10846435025028689 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2822 0.10316359838433084 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 3.6556909420386545E-5 0.0 0.0 0.0 0.0 7 3.6556909420386545E-5 0.0 0.0 3.6556909420386545E-5 0.0 8 3.6556909420386545E-5 0.0 0.0 3.6556909420386545E-5 0.0 9 7.311381884077309E-5 0.0 0.0 1.4622763768154618E-4 0.0 10 7.311381884077309E-5 0.0 0.0 2.5589836594270583E-4 0.0 11 7.311381884077309E-5 0.0 0.0 5.483536413057982E-4 0.0 12 7.311381884077309E-5 0.0 0.0 9.139227355096637E-4 0.0 13 7.311381884077309E-5 0.0 0.0 0.0010601503731912099 0.0 14 7.311381884077309E-5 0.0 0.0 0.0012429349202931425 0.0 15 7.311381884077309E-5 0.0 0.0 0.0017181747427581677 0.0 16 7.311381884077309E-5 0.0 0.0 0.0024493129311658987 0.0 17 7.311381884077309E-5 0.0 0.0 0.0033266787572551757 0.0 18 7.311381884077309E-5 0.0 0.0 0.0038750323985609738 0.0 19 7.311381884077309E-5 0.0 0.0 0.005008296590592957 0.0 20 7.311381884077309E-5 0.0 0.0 0.008334975347848132 0.0 21 7.311381884077309E-5 0.0 0.0 0.012868032115976064 0.0 22 7.311381884077309E-5 0.0 0.0 0.019521389630486417 0.0 23 7.311381884077309E-5 0.0 0.0 0.023981332579773574 0.0 24 7.311381884077309E-5 0.0 0.0 0.029684210449353876 0.0 25 7.311381884077309E-5 0.0 0.0 0.03414415339864103 0.0 26 7.311381884077309E-5 0.0 0.0 0.04313715311605612 0.0 27 7.311381884077309E-5 0.0 0.0 0.10389473657273857 0.0 28 7.311381884077309E-5 0.0 0.0 0.22584858639914807 0.0 29 1.0967072826115964E-4 0.0 0.0 0.37353850045750975 0.0 30 1.4622763768154618E-4 0.0 0.0 0.6228931796139664 0.0 31 1.4622763768154618E-4 0.0 0.0 0.9082564145495037 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9225 0.0 29.940922 1 GTATTGG 725 0.0 20.158619 1 ATTCGCG 85 1.2465935E-6 19.588236 29 GTATCAA 15505 0.0 17.790068 2 ACCGTCG 125 8.592906E-9 17.76 23 ATTGGAC 910 0.0 17.483517 3 TTGGACC 1495 0.0 15.71572 4 TTAACGG 275 0.0 15.472728 35 GGACCCT 1480 0.0 15.25 6 TAACGGC 270 0.0 15.074075 36 TATACTG 410 0.0 14.890244 5 TATACCG 190 4.5656634E-10 14.605264 5 TTCGCGT 115 2.2119384E-5 14.478261 30 TCGCGTC 115 2.2119384E-5 14.478261 31 TGGACCC 1535 0.0 14.342019 5 GATACTG 1190 0.0 14.302521 36 GACCGTG 185 4.9076334E-9 14.0 7 GACCGTC 160 1.7860475E-7 13.875 22 GATACCT 1085 0.0 13.81106 36 CGAACTA 270 0.0 13.703704 24 >>END_MODULE