##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088098_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1286772 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.646834870513192 31.0 31.0 34.0 30.0 34.0 2 31.85487405694249 31.0 31.0 34.0 30.0 34.0 3 31.932863009142256 31.0 31.0 34.0 30.0 34.0 4 35.635336329979204 37.0 35.0 37.0 33.0 37.0 5 35.505451626239925 37.0 35.0 37.0 33.0 37.0 6 35.533870025148204 37.0 35.0 37.0 33.0 37.0 7 35.41434535411091 37.0 35.0 37.0 33.0 37.0 8 35.41326357738589 37.0 35.0 37.0 33.0 37.0 9 37.010401221039935 39.0 37.0 39.0 33.0 39.0 10 36.83470964553161 39.0 37.0 39.0 32.0 39.0 11 36.89905904076247 39.0 37.0 39.0 33.0 39.0 12 36.77972321436898 39.0 37.0 39.0 32.0 39.0 13 36.807115790520776 39.0 37.0 39.0 32.0 39.0 14 37.8499741990034 40.0 37.0 41.0 33.0 41.0 15 37.8528309599525 40.0 37.0 41.0 33.0 41.0 16 37.74053523079458 39.0 37.0 41.0 32.0 41.0 17 37.713311293686836 39.0 37.0 41.0 32.0 41.0 18 37.696016854578744 39.0 37.0 41.0 32.0 41.0 19 37.71151221817074 39.0 37.0 41.0 32.0 41.0 20 37.6278027498267 39.0 37.0 41.0 32.0 41.0 21 37.53531783408405 39.0 36.0 41.0 32.0 41.0 22 37.43419735586413 39.0 36.0 41.0 32.0 41.0 23 37.235328403166996 39.0 36.0 41.0 31.0 41.0 24 37.10648661923013 39.0 36.0 41.0 31.0 41.0 25 36.97778161166081 39.0 36.0 40.0 31.0 41.0 26 37.116604961873584 39.0 36.0 41.0 31.0 41.0 27 37.049676244120946 39.0 36.0 41.0 31.0 41.0 28 36.976001964606006 39.0 36.0 41.0 31.0 41.0 29 36.87967487635727 39.0 36.0 41.0 30.0 41.0 30 36.70133947583566 39.0 35.0 40.0 30.0 41.0 31 36.56228686977957 39.0 35.0 40.0 30.0 41.0 32 36.4213963312848 38.0 35.0 40.0 30.0 41.0 33 36.284497953017315 38.0 35.0 40.0 30.0 41.0 34 36.1643018343576 38.0 35.0 40.0 30.0 41.0 35 35.99294513713385 38.0 35.0 40.0 29.0 41.0 36 35.888499283478346 38.0 35.0 40.0 28.0 41.0 37 35.750725070175605 38.0 35.0 40.0 27.0 41.0 38 35.680970677011935 38.0 35.0 40.0 27.0 41.0 39 35.6159910224966 38.0 35.0 40.0 27.0 41.0 40 35.477487853326 38.0 34.0 40.0 26.0 41.0 41 35.378377055142636 38.0 34.0 40.0 25.0 41.0 42 35.22795569067403 38.0 34.0 40.0 25.0 41.0 43 34.90105473230689 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 2.0 14 3.0 15 6.0 16 16.0 17 34.0 18 91.0 19 180.0 20 407.0 21 835.0 22 1544.0 23 2572.0 24 4277.0 25 6557.0 26 9732.0 27 13804.0 28 19115.0 29 25363.0 30 33009.0 31 41762.0 32 52072.0 33 64605.0 34 80941.0 35 100351.0 36 130404.0 37 175393.0 38 245722.0 39 277973.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.16702259607763 21.910641512249256 13.950567777352942 23.971768114320174 2 18.62971839611058 23.011768984715243 35.608794720432215 22.74971789874197 3 18.89884144199594 24.801052556319224 32.522389358798605 23.77771664288623 4 13.84837407093098 16.822716067803775 36.85338195111488 32.47552791015036 5 12.677226423950785 38.227595875570806 35.579263459260844 13.515914241217558 6 31.912413387919536 38.15539971339134 14.349317517011562 15.582869381677561 7 25.890212096626286 33.00032950670359 22.325555731706938 18.78390266496318 8 25.891766373530047 35.62682433251578 19.607513996263517 18.873895297690655 9 24.702355972930715 14.773868253272529 21.905279256931298 38.618496516865456 10 16.01868862549076 27.920564016002835 34.27437028471244 21.786377073793957 11 33.417730569207286 22.91983350585807 23.406322176733717 20.256113748200924 12 20.51699912649638 27.217953141659905 31.102712834907813 21.1623348969359 13 30.114115010273768 21.733298517530688 26.312819986757564 21.83976648543798 14 20.4104534447439 22.8348922730678 27.70490809560668 29.049746186581615 15 22.705265579294544 29.772873516054126 25.20019086520378 22.321670039447547 16 22.175101727423353 28.603124718287308 26.269455661142764 22.95231789314657 17 21.544687015259893 27.51528631334844 27.244686704404508 23.69533996698716 18 22.52147233542539 26.61854625372638 29.10329102591601 21.756690384932217 19 22.700214179357335 25.74853975684892 30.03764458660897 21.513601477184768 20 23.299465639600488 25.499000599950882 29.788416285091685 21.41311747535694 21 22.33682423925917 26.121255358369627 30.191828855461573 21.35009154690963 22 21.689545622689955 26.386259570460034 29.685600867908224 22.238593938941786 23 22.397751893886408 26.29510123005474 30.280344925130482 21.02680195092837 24 22.222818028368664 26.554820900672382 28.71138010463392 22.510980966325036 25 22.263384655556695 26.573394509672266 29.596463087477815 21.566757747293227 26 21.969082323830484 27.16876027765603 29.402877899114994 21.459279499398495 27 21.357785217583224 27.085528749459886 29.094975644480918 22.461710388475968 28 21.60343868222187 26.778636774813254 29.38927797620713 22.22864656675775 29 21.849791571467208 26.618468539881192 29.026587460715653 22.50515242793595 30 21.930924825843274 26.734029027675454 29.919053258852387 21.41599288762889 31 22.45137444706599 26.58621729412825 29.888200862312825 21.07420739649293 32 21.812333498086687 26.501897772099486 29.3053470234043 22.38042170640953 33 21.743789886631042 26.384316724330343 29.806679038710822 22.065214350327796 34 21.176245675224514 26.507260027417445 30.435850329351275 21.880643968006762 35 21.10311694690279 27.56416832197157 29.526831482189543 21.805883248936098 36 22.476709160597217 26.204486886565764 29.374823201002197 21.943980751834825 37 21.609344934456143 26.56818768204468 29.588225419887905 22.23424196361127 38 21.543832162962826 25.67175847780337 30.519081857547413 22.26532750168639 39 21.16622058919529 25.540888362507108 31.06416676769467 22.228724280602936 40 20.458480601069965 25.902102314940024 30.812373909286183 22.82704317470383 41 21.16124690310327 25.09380061114168 31.08219637977824 22.66275610597682 42 20.230157323908198 26.75291349205609 30.350986810406194 22.665942373629516 43 20.609167746889113 26.335823284933152 29.995445968671998 23.05956299950574 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 106.0 1 160.0 2 214.0 3 419.0 4 624.0 5 624.0 6 1047.5 7 1471.0 8 1607.5 9 1744.0 10 2634.5 11 3525.0 12 3525.0 13 6804.0 14 10083.0 15 15772.0 16 21461.0 17 20706.5 18 19952.0 19 19952.0 20 22319.0 21 24686.0 22 21338.5 23 17991.0 24 21149.5 25 24308.0 26 24308.0 27 27710.0 28 31112.0 29 33884.5 30 36657.0 31 40748.5 32 44840.0 33 44840.0 34 50641.0 35 56442.0 36 61822.5 37 67203.0 38 71511.5 39 75820.0 40 75820.0 41 78687.0 42 81554.0 43 85183.5 44 88813.0 45 90663.0 46 92513.0 47 92513.0 48 107466.5 49 122420.0 50 112962.0 51 103504.0 52 94539.0 53 85574.0 54 85574.0 55 77464.5 56 69355.0 57 61164.5 58 52974.0 59 48525.0 60 44076.0 61 44076.0 62 39403.5 63 34731.0 64 29686.0 65 24641.0 66 20794.0 67 16947.0 68 16947.0 69 14344.0 70 11741.0 71 9804.5 72 7868.0 73 6481.5 74 5095.0 75 5095.0 76 4042.5 77 2990.0 78 2336.0 79 1682.0 80 1293.5 81 905.0 82 905.0 83 710.5 84 516.0 85 403.0 86 290.0 87 236.5 88 183.0 89 183.0 90 140.0 91 97.0 92 63.5 93 30.0 94 27.5 95 25.0 96 25.0 97 15.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1286772.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.37709232763803 #Duplication Level Percentage of deduplicated Percentage of total 1 79.26714722415737 43.895841303806385 2 12.215454088876923 13.529126578075218 3 3.755074531120106 6.238353270210006 4 1.6013032427007774 3.5470207006234844 5 0.8019542974677039 2.220494858670756 6 0.47486466152764395 1.5777974522729352 7 0.32101401581174216 1.244377595445089 8 0.2212582152453988 0.9802109291114285 9 0.16997682967883546 0.8471540331615669 >10 1.00189725817095 10.636649703577044 >50 0.10337742183785371 3.964552295271024 >100 0.06105137155289731 6.089025482704123 >500 0.0033761051111441615 1.219517223344924 >1k 0.0018287236018697539 1.8110083940161479 >5k 1.4067104629767339E-4 0.6178212135642666 >10k+ 2.8134209259534677E-4 1.5810489661455496 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10269 0.7980434762335519 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10027 0.7792367256981035 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7931 0.6163485061844678 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3828 0.297488599378911 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2473 0.1921863391494375 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2287 0.1777315639445061 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2267 0.17617728704075003 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2050 0.15931338263499673 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1806 0.14035120440917273 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1667 0.12954897992806808 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1352 0.10506911869391003 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 7.771384518780328E-5 0.0 9 0.0 0.0 0.0 7.771384518780328E-5 0.0 10 0.0 0.0 0.0 2.3314153556340983E-4 0.0 11 0.0 0.0 0.0 2.3314153556340983E-4 0.0 12 0.0 0.0 0.0 5.43996916314623E-4 0.0 13 0.0 0.0 0.0 8.54852297065836E-4 0.0 14 0.0 0.0 0.0 0.0010102799874414426 0.0 15 0.0 0.0 0.0 0.0011657076778170492 0.0 16 0.0 0.0 0.0 0.0013211353681926558 0.0 17 0.0 0.0 0.0 0.0018651322845072787 0.0 18 0.0 0.0 0.0 0.0023314153556340984 0.0 19 7.771384518780328E-5 0.0 0.0 0.0027199845815731147 0.0 20 7.771384518780328E-5 0.0 0.0 0.0040411199497657705 0.0 21 7.771384518780328E-5 0.0 0.0 0.007460529138029115 0.0 22 7.771384518780328E-5 0.0 0.0 0.012123359849297312 0.0 23 7.771384518780328E-5 0.0 0.0 0.014998772121246033 0.0 24 7.771384518780328E-5 0.0 0.0 0.019117605916199605 0.0 25 7.771384518780328E-5 0.0 0.0 0.02463528892453364 0.0 26 7.771384518780328E-5 0.0 0.0 0.03419409188263344 0.0 27 7.771384518780328E-5 0.0 0.0 0.09084748502454203 0.0 28 7.771384518780328E-5 0.0 0.0 0.2036879882372324 0.0 29 7.771384518780328E-5 0.0 0.0 0.33075012511929075 0.0 30 7.771384518780328E-5 0.0 0.0 0.525811876540677 0.0 31 7.771384518780328E-5 0.0 0.0 0.795245777806791 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2490 0.0 29.050201 1 ACGTTTA 80 9.786163E-10 25.437502 26 CGTTTAT 105 2.2600943E-8 19.38095 27 TGGCGTA 60 9.237634E-4 18.5 5 GCGACTA 50 0.0070353295 18.499998 35 TAAGCCG 100 2.8755858E-7 18.499998 36 CTGCGTA 85 2.723526E-5 17.411764 9 TAAAACG 65 0.001580073 17.076923 4 CGAGCTA 65 0.001580073 17.076923 22 ACGACGC 65 0.001580073 17.076923 28 GTATCAA 4330 0.0 16.705544 2 TATACGG 90 4.4466207E-5 16.444445 2 TTGGCGT 70 0.0025927192 15.857143 4 TCACGTT 130 2.5894587E-7 15.653846 24 GTCTCAC 135 3.9729093E-7 15.074075 1 ACACCGC 75 0.0041047605 14.8 6 AATCGGC 75 0.0041047605 14.8 25 AGTACCG 100 1.0935253E-4 14.799999 5 ATTGGAC 280 0.0 14.535715 3 TCAAGAC 275 0.0 14.127274 3 >>END_MODULE