##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088097_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 402385 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.611561067137195 31.0 31.0 34.0 30.0 34.0 2 31.828353442598505 31.0 31.0 34.0 30.0 34.0 3 31.90125625955242 31.0 31.0 34.0 30.0 34.0 4 35.61723473787542 37.0 35.0 37.0 33.0 37.0 5 35.47293263913913 37.0 35.0 37.0 33.0 37.0 6 35.49186475639002 37.0 35.0 37.0 33.0 37.0 7 35.38001913590218 37.0 35.0 37.0 33.0 37.0 8 35.38071995725487 37.0 35.0 37.0 33.0 37.0 9 36.971099817339116 39.0 37.0 39.0 33.0 39.0 10 36.792052387638705 39.0 37.0 39.0 32.0 39.0 11 36.85033487828821 39.0 37.0 39.0 33.0 39.0 12 36.744558072492765 39.0 35.0 39.0 32.0 39.0 13 36.76795854716254 39.0 35.0 39.0 32.0 39.0 14 37.80431179094648 40.0 37.0 41.0 32.0 41.0 15 37.81360388682481 40.0 37.0 41.0 32.0 41.0 16 37.69388272425662 39.0 37.0 41.0 32.0 41.0 17 37.66723908694409 39.0 37.0 41.0 32.0 41.0 18 37.64615480199311 39.0 37.0 41.0 32.0 41.0 19 37.67884488735912 39.0 37.0 41.0 32.0 41.0 20 37.589552294444374 39.0 36.0 41.0 32.0 41.0 21 37.503348782882064 39.0 36.0 41.0 32.0 41.0 22 37.39290480509959 39.0 36.0 41.0 32.0 41.0 23 37.20613839979124 39.0 36.0 41.0 31.0 41.0 24 37.06349143233471 39.0 36.0 41.0 31.0 41.0 25 36.942875604209895 39.0 36.0 40.0 31.0 41.0 26 37.07608136486201 39.0 36.0 41.0 31.0 41.0 27 36.99630204903264 39.0 36.0 41.0 31.0 41.0 28 36.92572784770804 39.0 36.0 41.0 31.0 41.0 29 36.83255340035041 39.0 36.0 40.0 30.0 41.0 30 36.671777029461836 39.0 35.0 40.0 30.0 41.0 31 36.535872361047254 39.0 35.0 40.0 30.0 41.0 32 36.36980752264622 38.0 35.0 40.0 30.0 41.0 33 36.23410415398188 38.0 35.0 40.0 30.0 41.0 34 36.10107235607689 38.0 35.0 40.0 29.0 41.0 35 35.9391229792363 38.0 35.0 40.0 29.0 41.0 36 35.84096822694683 38.0 35.0 40.0 28.0 41.0 37 35.68753556916883 38.0 35.0 40.0 27.0 41.0 38 35.62164593610597 38.0 34.0 40.0 27.0 41.0 39 35.56673086720429 38.0 34.0 40.0 26.0 41.0 40 35.441524907737616 38.0 34.0 40.0 26.0 41.0 41 35.34891211153497 38.0 34.0 40.0 25.0 41.0 42 35.2066528324863 38.0 34.0 40.0 25.0 41.0 43 34.87446599649589 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 3.0 16 2.0 17 11.0 18 19.0 19 45.0 20 161.0 21 276.0 22 486.0 23 838.0 24 1282.0 25 2118.0 26 3180.0 27 4378.0 28 6238.0 29 8144.0 30 10491.0 31 13127.0 32 16440.0 33 20615.0 34 25777.0 35 31611.0 36 40581.0 37 54876.0 38 75842.0 39 85843.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.71196739441083 22.361171514842752 14.02736185493992 23.899499235806505 2 18.662226474644932 23.487456043341577 35.27641437926364 22.573903102749853 3 18.736781937696485 25.08741628042795 32.731836425314064 23.443965356561502 4 13.98859301415311 17.618698510133328 36.97155709084583 31.421151384867724 5 12.686109074642443 38.43483231233768 35.57488474968003 13.304173863339836 6 31.179591684580686 38.702237906482594 14.797519788262484 15.32065062067423 7 25.43285659256682 33.3168482920586 22.7597947239584 18.49050039141618 8 25.31481044273519 35.763510071200464 20.003230736732235 18.918448749332107 9 24.54539806404314 15.180237831927135 22.44268548777912 37.831678616250606 10 16.074903388545795 28.38077960162531 34.52091902034122 21.02339798948768 11 32.80490077910459 23.501124544901028 23.626626241037812 20.06734843495657 12 19.944331920921503 27.74009965580228 31.42984952222374 20.885718901052474 13 29.41237869204866 22.170061011220596 26.425935360413533 21.99162493631721 14 20.115063931309567 23.746909054760987 27.9968189669098 28.141208047019646 15 22.777439516880598 30.39974154106142 25.02677783714602 21.79604110491196 16 21.771934838525294 29.23394261714527 26.65407507735129 22.340047466978145 17 21.224449221516707 28.450861736893774 27.853423959640644 22.47126508194888 18 21.730929333846937 27.37080159548691 29.39622500838749 21.502044062278664 19 21.99187345452738 26.902096251102797 30.334629769996397 20.771400524373423 20 22.49959615790847 26.55019446549946 30.042620873044473 20.907588503547597 21 21.7321719248978 27.05493495035849 30.102016725275544 21.11087639946817 22 21.342495371348335 27.29028169539123 29.97129614672515 21.395926786535284 23 21.802751096586604 27.115076357220076 30.200181418293425 20.881991127899894 24 21.58604321731675 27.59670464853312 29.07041763485219 21.746834499297936 25 21.68545050138549 27.559426917007347 29.63132323521006 21.123799346397107 26 21.159834486872025 28.231668675522197 29.475750835642483 21.132746001963294 27 21.076580886464455 27.869080606881468 29.313468444400264 21.740870062253812 28 20.940889943710626 27.97072455484176 29.60050697714875 21.487878524298868 29 21.288566919741044 27.650136063720073 29.384793170719586 21.676503845819305 30 21.45358301129515 27.779614051219603 29.988443903227008 20.778359034258234 31 21.781130012301652 27.6516271729811 29.79981858170657 20.767424233010672 32 21.358152018589163 27.598941312424667 29.61367844228786 21.42922822669831 33 21.24880400611355 27.466729624613244 29.9496750624402 21.334791306833008 34 20.845210432794463 27.254495073126485 30.48572884178088 21.414565652298172 35 20.836512295438446 27.97668899188588 29.7836648980454 21.40313381463027 36 21.803993687637462 27.132472631932103 29.597524758626687 21.466008921803745 37 21.163562260024605 26.98783503361209 30.061756775227703 21.786845931135606 38 21.017682070653727 26.382196155423287 30.85875467524883 21.741367098674154 39 20.522136759571058 26.43189979745766 31.336655193409296 21.709308249561985 40 20.12873243286902 26.361817662189196 31.355542577382355 22.153907327559427 41 20.49007791045889 25.757918411471604 31.50191980317358 22.25008387489593 42 19.707991103048077 27.040272375958345 30.830423599289237 22.421312921704338 43 19.998508890738968 26.50421859661767 30.814269915628067 22.683002597015296 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 69.0 1 80.5 2 92.0 3 147.0 4 202.0 5 202.0 6 331.0 7 460.0 8 506.0 9 552.0 10 915.0 11 1278.0 12 1278.0 13 2266.0 14 3254.0 15 5014.5 16 6775.0 17 6490.0 18 6205.0 19 6205.0 20 7230.5 21 8256.0 22 7452.5 23 6649.0 24 7685.5 25 8722.0 26 8722.0 27 9848.5 28 10975.0 29 11905.5 30 12836.0 31 14479.0 32 16122.0 33 16122.0 34 17966.0 35 19810.0 36 21599.0 37 23388.0 38 24494.5 39 25601.0 40 25601.0 41 26354.5 42 27108.0 43 27804.5 44 28501.0 45 28873.5 46 29246.0 47 29246.0 48 32035.0 49 34824.0 50 32182.0 51 29540.0 52 26815.5 53 24091.0 54 24091.0 55 21892.0 56 19693.0 57 17686.0 58 15679.0 59 14180.0 60 12681.0 61 12681.0 62 11021.0 63 9361.0 64 8227.5 65 7094.0 66 5876.5 67 4659.0 68 4659.0 69 3902.5 70 3146.0 71 2637.5 72 2129.0 73 1785.5 74 1442.0 75 1442.0 76 1133.0 77 824.0 78 651.5 79 479.0 80 383.0 81 287.0 82 287.0 83 224.5 84 162.0 85 127.0 86 92.0 87 69.5 88 47.0 89 47.0 90 46.0 91 45.0 92 26.0 93 7.0 94 4.5 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 402385.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.98559646752943 #Duplication Level Percentage of deduplicated Percentage of total 1 85.66153149791315 57.380887817097715 2 8.86775894347299 11.880242443176137 3 2.322768816238683 4.667761638357763 4 0.9230276917262186 2.473182419453105 5 0.469853921050355 1.5736722577082756 6 0.3232257097885522 1.2990880178296038 7 0.22535875976647154 1.056705365949784 8 0.16963801938750017 0.9090643129793616 9 0.13582753188553004 0.8188639416058142 >10 0.8222394589077437 10.5373492760264 >50 0.05461857797702764 2.38808324746656 >100 0.021921742173211838 2.4274075982974814 >500 7.431099041766725E-4 0.2665593702221473 >1k 0.001486219808353345 2.321132293829828 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3091 0.7681697876411894 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2940 0.73064353790524 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2163 0.5375448886017123 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1132 0.28132261391453456 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 536 0.1332057606521118 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 535 0.13295724244193993 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 449 0.11158467636716081 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 439 0.1090994942654423 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 2.4851821017185034E-4 0.0 14 0.0 0.0 0.0 2.4851821017185034E-4 0.0 15 0.0 0.0 0.0 2.4851821017185034E-4 0.0 16 0.0 0.0 0.0 2.4851821017185034E-4 0.0 17 0.0 0.0 0.0 9.940728406874013E-4 0.0 18 0.0 0.0 0.0 0.0014911092610311021 0.0 19 0.0 0.0 0.0 0.0017396274712029524 0.0 20 0.0 0.0 0.0 0.0027337003118903538 0.0 21 0.0 0.0 0.0 0.0049703642034370065 0.0 22 0.0 0.0 0.0 0.00670999167463996 0.0 23 0.0 0.0 0.0 0.009443691986530313 0.0 24 0.0 0.0 0.0 0.01441405618996732 0.0 25 0.0 0.0 0.0 0.017644792922201374 0.0 26 0.0 0.0 0.0 0.02932514880027834 0.0 27 0.0 0.0 0.0 0.08772692819066318 0.0 28 0.0 0.0 0.0 0.1861401394187159 0.0 29 0.0 0.0 0.0 0.31164183555550035 0.0 30 0.0 0.0 0.0 0.49827901139455993 0.0 31 0.0 0.0 0.0 0.7681697876411894 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTAGA 30 3.5953577E-4 30.833334 1 CTAGTAC 25 0.0054921517 29.599998 3 GGTATCA 910 0.0 25.20879 1 CTAGGCG 45 0.0038215518 20.555555 22 CTAGCAC 45 0.0038215518 20.555555 3 CTGTACC 65 6.88789E-5 19.923077 4 TATTCTC 85 1.2411965E-6 19.588236 5 GAGTGGG 90 2.1451506E-6 18.5 7 GCCTAAA 60 9.222599E-4 18.5 1 TCCGGCG 50 0.0070271324 18.499998 17 TAGGCGC 50 0.0070271324 18.499998 23 GTCGGAA 50 0.0070271324 18.499998 11 CATACTG 85 2.7159987E-5 17.411764 5 TTATACT 75 2.0630617E-4 17.266666 4 GTACTAG 75 2.0630617E-4 17.266666 1 ATGAGTG 65 0.0015775225 17.076923 5 TAGCACA 100 5.858714E-6 16.65 4 GTATCAA 1410 0.0 16.269503 2 CCTTCCG 70 0.0025885683 15.857143 14 CGGCGGT 70 0.0025885683 15.857143 19 >>END_MODULE