##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088096_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1865442 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.574802111242267 31.0 31.0 34.0 30.0 34.0 2 31.771209182595868 31.0 31.0 34.0 30.0 34.0 3 31.831330590819764 31.0 31.0 34.0 30.0 34.0 4 35.52723483228104 37.0 35.0 37.0 33.0 37.0 5 35.441062225467206 37.0 35.0 37.0 33.0 37.0 6 35.48242936526571 37.0 35.0 37.0 33.0 37.0 7 35.33453358506992 37.0 35.0 37.0 32.0 37.0 8 35.38692170541888 37.0 35.0 37.0 33.0 37.0 9 36.91437686081905 39.0 37.0 39.0 33.0 39.0 10 36.77162731406283 39.0 37.0 39.0 32.0 39.0 11 36.81717952099288 39.0 37.0 39.0 32.0 39.0 12 36.68823420937236 39.0 35.0 39.0 32.0 39.0 13 36.71776876472171 39.0 35.0 39.0 32.0 39.0 14 37.66180079573635 39.0 36.0 41.0 32.0 41.0 15 37.67125592754961 39.0 36.0 41.0 32.0 41.0 16 37.542674604731744 39.0 36.0 41.0 32.0 41.0 17 37.608382892633486 39.0 36.0 41.0 32.0 41.0 18 37.60452482575175 39.0 36.0 41.0 32.0 41.0 19 37.65391044052831 39.0 37.0 41.0 32.0 41.0 20 37.58021369734358 39.0 36.0 41.0 32.0 41.0 21 37.49654237440778 39.0 36.0 41.0 32.0 41.0 22 37.385736463529824 39.0 36.0 41.0 31.0 41.0 23 37.1594731972369 39.0 36.0 41.0 31.0 41.0 24 37.002428378904305 39.0 36.0 41.0 31.0 41.0 25 36.85202488203868 39.0 35.0 40.0 30.0 41.0 26 37.00657806568095 39.0 36.0 40.0 31.0 41.0 27 36.94067250549735 39.0 35.0 41.0 31.0 41.0 28 36.84289514227727 39.0 35.0 41.0 30.0 41.0 29 36.743856951864494 39.0 35.0 40.0 30.0 41.0 30 36.490537363262966 39.0 35.0 40.0 30.0 41.0 31 36.236549836446265 38.0 35.0 40.0 30.0 41.0 32 36.069324589025015 38.0 35.0 40.0 30.0 41.0 33 35.87254173541713 38.0 35.0 40.0 29.0 41.0 34 35.72734343924925 38.0 35.0 40.0 28.0 41.0 35 35.50495753821346 38.0 34.0 40.0 27.0 41.0 36 35.39512512316116 38.0 34.0 40.0 26.0 41.0 37 35.189380318444634 38.0 34.0 40.0 25.0 41.0 38 35.066098007871595 38.0 34.0 40.0 25.0 41.0 39 34.92776618088367 38.0 34.0 40.0 24.0 41.0 40 34.70230594143372 38.0 33.0 40.0 23.0 41.0 41 34.51214939944528 38.0 33.0 40.0 23.0 41.0 42 34.23511585994097 38.0 33.0 40.0 21.0 41.0 43 33.89717503948126 38.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 2.0 14 5.0 15 13.0 16 21.0 17 58.0 18 151.0 19 299.0 20 623.0 21 1310.0 22 2623.0 23 4514.0 24 7517.0 25 11681.0 26 17227.0 27 24170.0 28 32273.0 29 42331.0 30 53389.0 31 65578.0 32 80668.0 33 99080.0 34 122434.0 35 148737.0 36 191951.0 37 263540.0 38 338432.0 39 356813.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.18055774449165 22.269092258027857 15.041689851520443 22.508660145960047 2 18.69428264186182 23.87380577900573 35.61579507698443 21.816116502148017 3 19.38961382878696 24.66021457649179 34.07948357547434 21.870688019246913 4 13.609428757366887 16.45722568699536 36.32897726115312 33.60436829448463 5 11.748690122769831 39.16535598533753 35.30123155799001 13.784722333902636 6 31.56972985490838 37.633011372103766 12.86231359645596 17.934945176531887 7 24.669488518002705 34.524739981194806 21.137725000294836 19.668046500507653 8 26.80120850715273 34.95139489729512 18.779356313409906 19.468040282142248 9 23.69309793603875 14.869291031294459 22.867127468985903 38.57048356368089 10 16.198305817066412 28.036250926053985 33.56185826200975 22.20358499486985 11 32.07990385120524 22.51895261283921 24.310806768583532 21.090336767372023 12 20.8847554627804 27.82750683216096 31.16805561362937 20.11968209142927 13 31.947013093947707 21.377614527817 27.180153550740254 19.49521882749504 14 19.940582446412165 23.717596151475092 28.375044627493107 27.966776774619635 15 21.54770826431484 30.01208292726335 26.77472684757822 21.665481960843596 16 20.909628924405048 29.24781365488715 27.29224494784614 22.55031247286166 17 20.935520911397944 26.96679928939093 27.329662353479765 24.76801744573136 18 23.090184524632768 25.27728012985662 30.778603676769368 20.85393166874124 19 22.202566469501598 24.283628223230743 32.1623507994352 21.35145450783246 20 23.613599350716882 23.745632402401146 32.27696170666255 20.36380654021942 21 22.258692577952036 24.746360380006454 33.044500981536814 19.950446060504696 22 20.11753782749611 25.139511172151156 32.44196281631913 22.300988184033596 23 21.782558771594076 25.4846304521931 33.65181013400577 19.081000642207048 24 21.592845020107834 25.309765728443985 30.62834438165325 22.46904486979493 25 21.158363540651493 26.18762738267928 31.89710535090343 20.756903725765795 26 21.089264635405446 26.81536064911158 31.674530754641527 20.420843960841452 27 19.396957932758028 27.101030211606687 31.27483995750069 22.2271718981346 28 20.329551923887205 26.199742473901626 31.485835528523538 21.984870073687627 29 20.675904155690716 25.9229180001308 30.45524867564899 22.945929168529496 30 21.019576057577773 26.31987486075686 32.54445863232414 20.11609044934123 31 22.197152203070374 25.840363838704178 32.30135270890223 19.661131249323216 32 21.451162780724353 25.81833152679097 30.953736433510127 21.77676925897455 33 20.894726290069592 25.834359899691332 31.936345380880244 21.334568429358832 34 19.663811579239663 26.8146637633333 32.711550399315556 20.80997425811148 35 19.261011599395747 29.33213683405863 31.032538133053723 20.374313433491903 36 22.122746244589752 26.167417695109258 30.93031035004036 20.779525710260625 37 21.12512744968753 27.29004707731465 30.805406975933852 20.77941849706397 38 20.851519371816437 25.32037983491312 32.40143622798243 21.42666456528801 39 20.30376715009097 24.997721719571018 33.4107948679187 21.28771626241931 40 18.747782026994138 25.766761979198492 32.79598079168369 22.68947520212368 41 20.841066085142288 24.87378326423443 32.60422998946094 21.680920661162343 42 19.293389984786447 27.513747412141466 31.751938682628566 21.44092392044352 43 19.739718522473495 27.68979148105382 30.3808963237667 22.18959367270599 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 120.0 1 212.0 2 304.0 3 608.0 4 912.0 5 912.0 6 1773.5 7 2635.0 8 3001.0 9 3367.0 10 5616.0 11 7865.0 12 7865.0 13 15633.5 14 23402.0 15 37932.5 16 52463.0 17 49202.5 18 45942.0 19 45942.0 20 49660.5 21 53379.0 22 42337.5 23 31296.0 24 34699.0 25 38102.0 26 38102.0 27 41138.5 28 44175.0 29 46357.0 30 48539.0 31 52960.0 32 57381.0 33 57381.0 34 63261.5 35 69142.0 36 75592.0 37 82042.0 38 86032.0 39 90022.0 40 90022.0 41 93167.0 42 96312.0 43 100615.0 44 104918.0 45 115380.5 46 125843.0 47 125843.0 48 176729.0 49 227615.0 50 204403.0 51 181191.0 52 162371.5 53 143552.0 54 143552.0 55 122682.5 56 101813.0 57 83702.0 58 65591.0 59 58346.0 60 51101.0 61 51101.0 62 44727.0 63 38353.0 64 33154.5 65 27956.0 66 23300.5 67 18645.0 68 18645.0 69 15469.0 70 12293.0 71 10106.0 72 7919.0 73 6431.0 74 4943.0 75 4943.0 76 3875.0 77 2807.0 78 2227.0 79 1647.0 80 1253.0 81 859.0 82 859.0 83 650.5 84 442.0 85 360.5 86 279.0 87 208.5 88 138.0 89 138.0 90 113.5 91 89.0 92 60.0 93 31.0 94 22.0 95 13.0 96 13.0 97 7.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1865442.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.24986674241237 #Duplication Level Percentage of deduplicated Percentage of total 1 76.28414760490668 33.75563366075636 2 12.92969031431293 11.442741468580143 3 4.485499422366321 5.954482551386323 4 2.051484202720437 3.6311161037817374 5 1.0742245627636466 2.3767146876858782 6 0.6387550622373281 1.6958895831025858 7 0.41688773673264995 1.2913058757875957 8 0.29617767753704993 1.0484658210473314 9 0.21452019036523567 0.8543240853496753 >10 1.3566540649149046 11.593655044641514 >50 0.15031132044709372 4.629195768049149 >100 0.08804653170340415 7.304014669064561 >500 0.005343371389896739 1.6979328144231025 >1k 0.007043535013954793 5.795283234846963 >5k 7.286415531677372E-4 2.404791321272534 >10k+ 4.857610354451581E-4 4.524453310224627 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 26956 1.4450194645558534 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 26211 1.4050825488007668 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21022 1.1269179100717148 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10007 0.5364412294780541 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8080 0.43314131449811893 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 8056 0.43185475613822355 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7627 0.4088575254550932 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7027 0.3766935664577082 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7017 0.37615750047441837 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6944 0.37224421879640324 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4134 0.22160967749198313 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3855 0.20665343655819907 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3793 0.20332982746180261 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3472 0.18612210939820162 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3270 0.17529357653574862 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3261 0.17481111715078784 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3253 0.17438226436415605 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2890 0.1549230691707381 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2803 0.15025929511611724 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2746 0.14720371901136567 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2730 0.14634601343810205 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2529 0.13557108717397806 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2503 0.13417731561742471 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2397 0.12849501619455336 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2395 0.1283878029978954 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2346 0.12576107967977562 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2057 0.1102687727627018 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1893 0.1014772906367499 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.360659832897512E-5 0.0 3 0.0 0.0 0.0 5.360659832897512E-5 0.0 4 0.0 0.0 0.0 5.360659832897512E-5 0.0 5 0.0 5.360659832897512E-5 0.0 5.360659832897512E-5 0.0 6 0.0 5.360659832897512E-5 0.0 1.0721319665795024E-4 0.0 7 0.0 5.360659832897512E-5 0.0 1.6081979498692536E-4 0.0 8 0.0 1.0721319665795024E-4 0.0 2.1442639331590048E-4 0.0 9 0.0 1.0721319665795024E-4 0.0 4.2885278663180095E-4 0.0 10 0.0 1.0721319665795024E-4 0.0 5.896725816187262E-4 0.0 11 0.0 1.0721319665795024E-4 0.0 0.0011257385649084775 0.0 12 0.0 1.0721319665795024E-4 0.0 0.0016081979498692536 0.0 13 0.0 1.0721319665795024E-4 0.0 0.0020906573348300297 0.0 14 0.0 1.0721319665795024E-4 0.0 0.0025195101214618306 0.0 15 0.0 1.0721319665795024E-4 0.0 0.003216395899738507 0.0 16 5.360659832897512E-5 1.0721319665795024E-4 0.0 0.0038596750796862085 0.0 17 5.360659832897512E-5 1.0721319665795024E-4 0.0 0.004985413644594686 0.0 18 5.360659832897512E-5 1.6081979498692536E-4 0.0 0.005735906021200337 0.0 19 5.360659832897512E-5 1.6081979498692536E-4 0.0 0.006968857782766765 0.0 20 5.360659832897512E-5 1.6081979498692536E-4 0.0 0.011042959255768875 0.0 21 5.360659832897512E-5 1.6081979498692536E-4 0.0 0.01983444138172079 0.0 22 5.360659832897512E-5 1.6081979498692536E-4 0.0 0.03050215444918684 0.0 23 5.360659832897512E-5 1.6081979498692536E-4 0.0 0.03698855284699283 0.0 24 5.360659832897512E-5 1.6081979498692536E-4 0.0 0.047173806529498104 0.0 25 5.360659832897512E-5 1.6081979498692536E-4 0.0 0.05124790800250021 0.0 26 1.0721319665795024E-4 1.6081979498692536E-4 0.0 0.06030742312009701 0.0 27 1.6081979498692536E-4 1.6081979498692536E-4 0.0 0.11412844784238803 0.0 28 1.6081979498692536E-4 1.6081979498692536E-4 0.0 0.2290073880613817 0.0 29 1.6081979498692536E-4 1.6081979498692536E-4 0.0 0.36993913506825726 0.0 30 1.6081979498692536E-4 1.6081979498692536E-4 0.0 0.6073091524689591 0.0 31 2.1442639331590048E-4 1.6081979498692536E-4 0.0 0.8959806844704901 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6245 0.0 30.18655 1 TCTAACG 70 5.1047373E-6 21.142857 2 CGACGAG 110 3.855348E-8 18.5 24 TATACCG 160 1.8189894E-12 18.5 5 GCGTCCC 60 9.239758E-4 18.5 11 GTATTGG 670 0.0 18.22388 1 GTATCAA 10835 0.0 17.432856 2 ACGCCTA 90 4.4483466E-5 16.444445 6 ATTGGAC 720 0.0 16.1875 3 CAATGCG 115 1.2431337E-6 16.086956 19 GCGACGA 140 3.4766344E-8 15.857142 23 GTATAAC 105 9.349262E-6 15.857142 1 CTAGTAC 270 0.0 15.759259 3 CCTAGTA 170 1.4879333E-9 15.235294 2 CGCCGGA 175 2.240995E-9 14.8 14 CTAGGCG 75 0.004105681 14.8 12 CGTGCGG 140 6.0001184E-7 14.535714 10 CGACCGC 205 9.276846E-11 14.439025 10 CCGACCG 220 1.8189894E-11 14.295454 9 TTGGACC 1170 0.0 14.23077 4 >>END_MODULE