##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088095_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2773716 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52167525442403 31.0 31.0 34.0 30.0 34.0 2 31.72254369228861 31.0 31.0 34.0 30.0 34.0 3 31.78511029968461 31.0 31.0 34.0 30.0 34.0 4 35.51272985410186 37.0 35.0 37.0 33.0 37.0 5 35.38676237942168 37.0 35.0 37.0 33.0 37.0 6 35.419294549261714 37.0 35.0 37.0 33.0 37.0 7 35.28472093033317 37.0 35.0 37.0 32.0 37.0 8 35.30004694063848 37.0 35.0 37.0 32.0 37.0 9 36.8502690974851 39.0 37.0 39.0 33.0 39.0 10 36.68152254953283 39.0 35.0 39.0 32.0 39.0 11 36.75568154778644 39.0 35.0 39.0 32.0 39.0 12 36.63456496627629 39.0 35.0 39.0 32.0 39.0 13 36.67208539014088 39.0 35.0 39.0 32.0 39.0 14 37.63833572002325 39.0 36.0 41.0 32.0 41.0 15 37.666090544237406 39.0 36.0 41.0 32.0 41.0 16 37.53874080835961 39.0 36.0 41.0 32.0 41.0 17 37.562432851813234 39.0 36.0 41.0 32.0 41.0 18 37.55238315674712 39.0 36.0 41.0 32.0 41.0 19 37.58877044369358 39.0 37.0 41.0 32.0 41.0 20 37.513808190889044 39.0 36.0 41.0 32.0 41.0 21 37.430218883259855 39.0 36.0 41.0 32.0 41.0 22 37.340388850192305 39.0 36.0 41.0 31.0 41.0 23 37.144575003352905 39.0 36.0 40.0 31.0 41.0 24 37.007427580905905 39.0 36.0 40.0 31.0 41.0 25 36.87160365372662 39.0 36.0 40.0 30.0 41.0 26 36.97421942260851 39.0 36.0 40.0 31.0 41.0 27 36.888352304273404 39.0 35.0 40.0 31.0 41.0 28 36.79305740025295 39.0 35.0 40.0 30.0 41.0 29 36.677631379708664 39.0 35.0 40.0 30.0 41.0 30 36.471030199198474 39.0 35.0 40.0 30.0 41.0 31 36.28969764748806 38.0 35.0 40.0 30.0 41.0 32 36.12638208093402 38.0 35.0 40.0 30.0 41.0 33 35.962528607831516 38.0 35.0 40.0 29.0 41.0 34 35.825868257600995 38.0 35.0 40.0 29.0 41.0 35 35.641100242418474 38.0 34.0 40.0 27.0 41.0 36 35.526123799264234 38.0 34.0 40.0 27.0 41.0 37 35.35690532123692 38.0 34.0 40.0 26.0 41.0 38 35.24648558107607 38.0 34.0 40.0 25.0 41.0 39 35.15256031980203 38.0 34.0 40.0 25.0 41.0 40 34.973335049442696 38.0 34.0 40.0 24.0 41.0 41 34.83628785355098 38.0 33.0 40.0 24.0 41.0 42 34.64078081533942 38.0 33.0 40.0 23.0 41.0 43 34.28018730107913 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 2.0 14 6.0 15 14.0 16 33.0 17 67.0 18 208.0 19 506.0 20 974.0 21 1975.0 22 3745.0 23 6534.0 24 10714.0 25 16772.0 26 24442.0 27 34495.0 28 46951.0 29 61774.0 30 78578.0 31 97911.0 32 120408.0 33 149080.0 34 183306.0 35 223591.0 36 285066.0 37 380213.0 38 499655.0 39 546693.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.50811835097753 22.551984413689073 14.875135017427885 23.06476221790551 2 18.6147392162716 23.810945316679863 35.29788197493903 22.2764334921095 3 19.071959782472323 24.864910466680797 33.48233921569476 22.580790535152122 4 13.813346427680411 17.022975675952402 36.56253920733052 32.60113868903666 5 12.222376047151187 38.963650207879965 35.21279756110575 13.601176183863092 6 31.301834794910512 38.16973331083644 13.989644217360391 16.53878767689266 7 24.674227642628157 34.03499132571611 22.177793256411256 19.112987775244473 8 26.219555282516303 35.36317344674077 19.510829515350526 18.906441755392407 9 24.181783571209163 14.827040691981445 22.572606568228327 38.418569168581065 10 16.190266054635728 28.40074470493735 33.91443103764048 21.494558202786443 11 32.49510764620459 23.132216852770796 23.73891198666338 20.633763514361238 12 20.163708180650076 27.96746314330667 31.351515439936893 20.517313236106364 13 30.682268840789757 21.8292355814366 26.896661374127707 20.591834203645938 14 19.832275546595255 23.646400712978547 28.53662739804652 27.984696342379685 15 22.05034689924996 30.291853960535253 26.058471739716683 21.599327400498105 16 21.212373581145293 29.050594941947917 27.331889782515585 22.405141694391205 17 20.796072849563547 27.80558644071707 28.00939245402197 23.38894825569741 18 22.11354731342358 26.407317836433148 30.372431784652793 21.106703065490485 19 21.995402557435582 25.67303213450836 31.58733626658245 20.744229041473606 20 22.670994434902493 25.2487998050269 31.489813665133703 20.590392094936902 21 21.651423577612128 26.02602429376331 31.941229743780546 20.381322384844015 22 20.433959352723928 26.264152494343328 31.60929237167756 21.692595781255182 23 21.477288950995703 26.4122570587616 32.212526444668455 19.89792754557424 24 21.309968288029488 26.36971485184496 30.431305872699294 21.889010987426254 25 21.230616256314633 26.77775951106746 31.226628825734142 20.764995406883763 26 20.9294318524319 27.492793061726577 30.986193251219664 20.59158183462186 27 20.117740965549466 27.403093900024373 30.682845684273374 21.79631945015279 28 20.40951561010572 27.06650572733474 30.982876401188875 21.541102261370668 29 20.66228121408248 26.751296816256602 30.527133996414918 22.059287973246 30 20.954885071146435 26.91021719599267 31.676134110341508 20.458763622519392 31 21.59283791130743 26.708610398469055 31.499223424460183 20.19932826576333 32 21.033119468611783 26.660516073022617 30.851536350513175 21.454828107852425 33 20.833135043385838 26.52978891854826 31.33922146319234 21.29785457487356 34 19.970032981026176 26.789404538892953 32.0729303216335 21.16763215844737 35 19.831734755829363 28.194811581286622 30.980532974536683 20.99292068834733 36 21.61821902458651 26.36812853226502 30.85950400113061 21.154148442017856 37 20.866772229024168 26.868071568971015 31.016117006932216 21.2490391950726 38 20.62979771541138 25.76182997826742 32.16367501214977 21.44469729417143 39 20.128052042819093 25.614374362768217 32.76146512476403 21.496108469648657 40 19.231781480151536 25.891151076750468 32.40274058339065 22.47432685970734 41 20.341520184474547 25.137901645301824 32.4902765820293 22.03030158819432 42 19.342102796393 27.047469892375425 31.630815844159965 21.97961146707161 43 19.68139492291208 26.91162325198398 31.000974865487308 22.406006959616633 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 304.0 1 427.5 2 551.0 3 1016.0 4 1481.0 5 1481.0 6 2661.5 7 3842.0 8 4374.5 9 4907.0 10 7742.5 11 10578.0 12 10578.0 13 20389.5 14 30201.0 15 48510.5 16 66820.0 17 62728.5 18 58637.0 19 58637.0 20 66299.0 21 73961.0 22 61949.0 23 49937.0 24 56104.5 25 62272.0 26 62272.0 27 67593.5 28 72915.0 29 77247.0 30 81579.0 31 89844.5 32 98110.0 33 98110.0 34 109569.0 35 121028.0 36 130922.5 37 140817.0 38 148096.5 39 155376.0 40 155376.0 41 159607.0 42 163838.0 43 170794.0 44 177750.0 45 184899.5 46 192049.0 47 192049.0 48 236025.5 49 280002.0 50 253825.5 51 227649.0 52 204382.5 53 181116.0 54 181116.0 55 160157.0 56 139198.0 57 120152.0 58 101106.0 59 91132.5 60 81159.0 61 81159.0 62 71585.5 63 62012.0 64 54127.5 65 46243.0 66 38818.0 67 31393.0 68 31393.0 69 26537.0 70 21681.0 71 17917.5 72 14154.0 73 11641.0 74 9128.0 75 9128.0 76 7201.5 77 5275.0 78 4221.5 79 3168.0 80 2423.0 81 1678.0 82 1678.0 83 1262.5 84 847.0 85 645.5 86 444.0 87 348.0 88 252.0 89 252.0 90 211.0 91 170.0 92 108.5 93 47.0 94 37.5 95 28.0 96 28.0 97 18.0 98 8.0 99 6.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2773716.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.41470360128381 #Duplication Level Percentage of deduplicated Percentage of total 1 71.50232421793093 29.612475642885073 2 13.889552712062029 11.504634174489132 3 5.76141054577127 7.158213302352838 4 2.9266514872281664 4.848256155512439 5 1.6098470794573467 3.3335669819559195 6 0.9744008147095082 2.4212712558026253 7 0.6544426729327568 1.8972484526479432 8 0.4614334515452117 1.5288103701969837 9 0.33394573193735366 1.244723715638935 >10 1.6118055960315851 12.27981299435132 >50 0.14480268293102602 4.194882484959468 >100 0.11619410438932448 9.31884440409433 >500 0.0071621857750244836 2.0271431278777134 >1k 0.005240623737820878 3.87758043527465 >5k 4.3671864481840657E-4 1.1243337384132346 >10k+ 3.4937491585472524E-4 3.6282027635475793 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 33000 1.1897396849569313 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31635 1.1405277252609858 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23768 0.8569009949107984 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11898 0.4289552355035627 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7172 0.25857009153063976 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6786 0.24465374248841626 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6210 0.2238873770782589 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5834 0.2103315552132951 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5080 0.1831478060479155 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4844 0.17463936466458715 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4176 0.15055614922364077 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3788 0.13656769474596533 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3616 0.1303666272970989 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3433 0.12376897995324684 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3248 0.11709922717394283 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3122 0.11255658474047092 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.605271772596762E-5 0.0 3 0.0 0.0 0.0 3.605271772596762E-5 0.0 4 0.0 0.0 0.0 7.210543545193524E-5 0.0 5 0.0 0.0 0.0 7.210543545193524E-5 0.0 6 0.0 0.0 0.0 7.210543545193524E-5 0.0 7 0.0 0.0 0.0 1.0815815317790286E-4 0.0 8 3.605271772596762E-5 0.0 0.0 1.4421087090387048E-4 0.0 9 3.605271772596762E-5 0.0 0.0 2.1631630635580572E-4 0.0 10 3.605271772596762E-5 0.0 0.0 5.407907658895143E-4 0.0 11 3.605271772596762E-5 0.0 0.0 0.0010094760963270933 0.0 12 3.605271772596762E-5 0.0 0.0 0.0015502668622166076 0.0 13 3.605271772596762E-5 0.0 0.0 0.0017665831685724134 0.0 14 3.605271772596762E-5 0.0 0.0 0.0019468467572022513 0.0 15 3.605271772596762E-5 0.0 0.0 0.0028121119826254744 0.0 16 3.605271772596762E-5 0.0 0.0 0.003497113619418859 0.0 17 3.605271772596762E-5 0.0 0.0 0.004037904385308373 0.0 18 3.605271772596762E-5 0.0 0.0 0.004975275046183531 0.0 19 3.605271772596762E-5 0.0 0.0 0.00605685657796256 0.0 20 3.605271772596762E-5 0.0 0.0 0.009626075632833355 0.0 21 3.605271772596762E-5 0.0 0.0 0.014673456114468821 0.0 22 3.605271772596762E-5 0.0 0.0 0.023975057287768466 0.0 23 3.605271772596762E-5 0.0 0.0 0.029635333970745383 0.0 24 3.605271772596762E-5 0.0 0.0 0.0379635117654439 0.0 25 3.605271772596762E-5 0.0 0.0 0.04369589388387275 0.0 26 7.210543545193524E-5 0.0 0.0 0.05559329073344207 0.0 27 7.210543545193524E-5 0.0 0.0 0.13166452513523375 0.0 28 7.210543545193524E-5 0.0 0.0 0.26996275033204553 0.0 29 7.210543545193524E-5 0.0 0.0 0.43180340020391417 0.0 30 7.210543545193524E-5 0.0 0.0 0.6877776960582843 0.0 31 7.210543545193524E-5 0.0 0.0 0.9987684391624809 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7615 0.0 29.007221 1 TAGACCG 45 0.0038271516 20.555555 5 TATCGGT 110 3.857531E-8 18.5 13 TATACCG 230 0.0 17.695652 5 GTATTGG 580 0.0 17.224138 1 GTATCAA 12875 0.0 17.156504 2 CTGTGCG 185 1.8189894E-11 16.0 9 TTGGACC 1080 0.0 15.930556 4 AGCCGTC 260 0.0 15.653846 12 ATTGGAC 660 0.0 15.416667 3 CGCCGGA 240 0.0 15.416667 14 CGAATTA 260 0.0 14.942307 15 CCGAATT 275 0.0 14.8 14 GGACCCT 1020 0.0 14.691176 6 GCCGTCA 290 0.0 14.672414 13 CTAGTAC 265 0.0 14.6603775 3 TTAACGG 165 1.6478225E-8 14.575757 35 ATCGGTC 90 8.2792144E-4 14.388888 14 TAAGCCG 275 0.0 14.127274 10 TAGGTCG 145 8.9222704E-7 14.034483 21 >>END_MODULE