##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088094_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1090903 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.090414088145327 31.0 31.0 33.0 30.0 34.0 2 31.307526883691768 31.0 31.0 34.0 30.0 34.0 3 31.31730868830684 31.0 31.0 34.0 28.0 34.0 4 35.10162956743175 35.0 35.0 37.0 32.0 37.0 5 34.94450102346405 35.0 35.0 37.0 32.0 37.0 6 35.01791726670474 36.0 35.0 37.0 32.0 37.0 7 34.860905140053696 35.0 35.0 37.0 32.0 37.0 8 34.91367976804537 36.0 35.0 37.0 32.0 37.0 9 36.36752671869085 38.0 35.0 39.0 32.0 39.0 10 36.14044236746989 38.0 35.0 39.0 31.0 39.0 11 36.251519154315275 38.0 35.0 39.0 32.0 39.0 12 36.08736065443032 38.0 35.0 39.0 31.0 39.0 13 36.148964665052716 38.0 35.0 39.0 32.0 39.0 14 36.959222772327145 38.0 36.0 40.0 31.0 41.0 15 37.00405260596038 38.0 36.0 40.0 31.0 41.0 16 36.828709793629685 38.0 36.0 40.0 31.0 41.0 17 36.90057777822593 38.0 36.0 40.0 31.0 41.0 18 36.90093528022198 38.0 36.0 40.0 31.0 41.0 19 36.94887171453374 39.0 36.0 40.0 31.0 41.0 20 36.8851786089139 39.0 36.0 40.0 31.0 41.0 21 36.78995566058577 39.0 36.0 40.0 30.0 41.0 22 36.68944626607499 39.0 35.0 40.0 30.0 41.0 23 36.46958803853322 38.0 35.0 40.0 30.0 41.0 24 36.30668996235229 38.0 35.0 40.0 30.0 41.0 25 36.16936061226342 38.0 34.0 40.0 29.0 41.0 26 36.22538392506025 38.0 35.0 40.0 30.0 41.0 27 36.10189265223398 38.0 35.0 40.0 29.0 41.0 28 35.98445324653063 38.0 34.0 40.0 29.0 41.0 29 35.8522728418567 38.0 34.0 40.0 29.0 41.0 30 35.599407096689625 38.0 34.0 40.0 27.0 41.0 31 35.382422635193045 38.0 34.0 40.0 27.0 41.0 32 35.20411072295153 38.0 34.0 40.0 27.0 41.0 33 35.011309896480256 38.0 33.0 40.0 26.0 41.0 34 34.844848717072004 37.0 33.0 40.0 25.0 41.0 35 34.61455601460442 37.0 33.0 40.0 25.0 41.0 36 34.4889270631761 37.0 33.0 40.0 24.0 41.0 37 34.282216659043016 37.0 33.0 40.0 24.0 41.0 38 34.12667395726293 37.0 33.0 40.0 23.0 41.0 39 33.99876615977772 37.0 33.0 40.0 22.0 41.0 40 33.76452076857429 37.0 33.0 40.0 21.0 41.0 41 33.59172355378984 37.0 32.0 40.0 19.0 41.0 42 33.33414978233628 37.0 32.0 40.0 18.0 41.0 43 32.95308748807181 37.0 31.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 1.0 14 5.0 15 11.0 16 26.0 17 55.0 18 143.0 19 306.0 20 749.0 21 1373.0 22 2449.0 23 4218.0 24 6663.0 25 9808.0 26 14258.0 27 19041.0 28 25094.0 29 32010.0 30 39691.0 31 47757.0 32 57463.0 33 69118.0 34 81821.0 35 96970.0 36 121950.0 37 153430.0 38 184627.0 39 121861.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.447231330374926 23.856108196604097 16.045972923348824 21.650687549672153 2 19.899752773619653 25.072898323682306 33.72912165426257 21.29822724843547 3 20.472397637553478 24.916055781311446 33.664679627794584 20.94686695334049 4 15.036533953981243 18.18704321099126 34.9719452600277 31.804477574999794 5 11.901241448598087 39.8502891641145 34.78778589847127 13.460683488816146 6 31.526726024220302 38.03931238616082 13.207132073154076 17.2268295164648 7 24.269802173062132 34.75194403168751 21.53518690479355 19.443066890456805 8 26.660665522049165 35.58519868402599 18.87583039005301 18.87830540387184 9 23.805874582799756 14.919108298354667 22.729151904431465 38.545865214414114 10 16.415666654138818 29.112579211900602 33.392244773366656 21.079509360593928 11 32.381797465035845 23.06942047093096 23.59485673795012 20.95392532608307 12 20.307030047584433 28.641593248895642 31.143465551015993 19.907911152503935 13 31.552667835728748 21.77104655500993 27.078392854360107 19.597892754901213 14 19.640701327249076 24.27209385252401 28.887169620030377 27.20003520019653 15 21.798913377266356 30.661662860950972 26.417105828840874 21.12231793294179 16 20.501089464416175 29.17427122301433 28.10387357996082 22.220765732608676 17 20.791216084289804 28.016239757338646 28.11249029473748 23.080053863634074 18 21.903780629441847 26.17473780895277 30.87451404937011 21.046967512235277 19 21.735938025653976 25.384841732033003 32.72683272481605 20.152387517496972 20 22.481100519477902 24.946855953279073 32.46053957134594 20.111503955897085 21 21.618054034135024 25.645634854794608 33.22531884136353 19.51099226970684 22 19.85061916595701 26.235879816995645 32.56669016402009 21.34681085302726 23 21.231126873791712 26.301513516783803 33.34861119641251 19.118748413011975 24 20.921475144902892 26.380805626164744 31.192232489964734 21.505486738967626 25 20.744374156089037 26.960233861305728 32.13594609236568 20.159445890239557 26 20.519147898575767 27.653329397755805 31.852602843699213 19.974919859969216 27 19.444716899669356 27.51738697207726 31.679810212273686 21.358085915979697 28 19.986378257278602 27.156218288885448 31.9567367584469 20.90066669538905 29 20.196937766235862 26.649298791918252 31.139707196698513 22.01405624514737 30 20.61970679336293 27.01028414075312 32.72527438278197 19.64473468310198 31 21.452136441095128 26.957942181843848 32.259421781771614 19.330499595289407 32 20.750790858582295 26.860133302410937 31.453758950154135 20.93531688885263 33 20.382563802647898 26.854541604523956 31.954261744628077 20.80863284820007 34 19.422533442478386 27.31342749997021 32.82198325607318 20.442055801478226 35 19.13689851435004 29.012570320184288 31.692918618795623 20.15761254667005 36 21.40703618928539 26.817049728527653 31.48034243191191 20.295571650275047 37 20.539498012197235 27.60566246494876 31.300399760565327 20.554439762288673 38 20.353321972714348 26.10021239285253 32.75057452404109 20.795891110392034 39 19.89608608648065 25.97792837676677 33.288385860154385 20.837599676598195 40 18.655187491463494 26.48099785223801 32.76533293977558 22.098481716522915 41 20.11223729332489 25.607959644441348 32.866716839169015 21.413086223064745 42 19.0355146149566 27.651496054186303 31.908428155390535 21.40456117546656 43 19.284666006051868 27.601354107560432 31.12779046349676 21.986189422890945 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 145.0 1 175.0 2 205.0 3 323.5 4 442.0 5 442.0 6 871.0 7 1300.0 8 1628.0 9 1956.0 10 3290.5 11 4625.0 12 4625.0 13 9389.0 14 14153.0 15 23556.0 16 32959.0 17 30142.5 18 27326.0 19 27326.0 20 31092.5 21 34859.0 22 28417.0 23 21975.0 24 23982.5 25 25990.0 26 25990.0 27 27942.0 28 29894.0 29 30992.5 30 32091.0 31 34879.5 32 37668.0 33 37668.0 34 41574.0 35 45480.0 36 49513.5 37 53547.0 38 55119.5 39 56692.0 40 56692.0 41 57917.5 42 59143.0 43 61443.0 44 63743.0 45 68159.0 46 72575.0 47 72575.0 48 94718.5 49 116862.0 50 106028.0 51 95194.0 52 83940.5 53 72687.0 54 72687.0 55 63357.0 56 54027.0 57 45930.0 58 37833.0 59 33734.0 60 29635.0 61 29635.0 62 25923.0 63 22211.0 64 19084.0 65 15957.0 66 13402.5 67 10848.0 68 10848.0 69 9122.5 70 7397.0 71 5985.5 72 4574.0 73 3803.5 74 3033.0 75 3033.0 76 2435.0 77 1837.0 78 1398.5 79 960.0 80 738.5 81 517.0 82 517.0 83 402.0 84 287.0 85 215.0 86 143.0 87 109.0 88 75.0 89 75.0 90 54.5 91 34.0 92 24.0 93 14.0 94 8.5 95 3.0 96 3.0 97 4.0 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1090903.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.01468086697664 #Duplication Level Percentage of deduplicated Percentage of total 1 79.32070153013373 41.25840976234612 2 11.9146544414522 12.39473896824884 3 3.845742685857003 6.001052355040848 4 1.648189611583638 3.4292022661915644 5 0.8399713423401782 2.1845420654615175 6 0.47148131134790977 1.4714369966703105 7 0.329284044639055 1.1989323147541415 8 0.23064414639900951 0.9597505335024575 9 0.17492500110982956 0.8188801297544986 >10 1.0504473497486853 10.41753696900058 >50 0.10565774325409936 3.7777476895430913 >100 0.05733019913730622 5.676406974622574 >500 0.006723911837015829 2.501760666743928 >1k 0.0035389009668504363 3.4887697679933534 >5k 1.7694504834252182E-4 0.5158696393605958 >10k+ 5.308351450275655E-4 3.904962900765631 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16056 1.4718082175958815 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 15905 1.4579664736461444 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10467 0.9594803570986604 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5605 0.5137945353528224 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3682 0.33751855114524393 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3424 0.3138684190986733 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3216 0.29480164597585673 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2699 0.24740971470424045 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2596 0.23796799532130722 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2397 0.21972622680476633 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1968 0.18040100723895708 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1952 0.17893433238335582 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1877 0.17205929399772482 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1612 0.14776749170182865 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1606 0.1472174886309782 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1347 0.12347568940593251 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1318 0.1208173412301552 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1287 0.11797565869742772 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1239 0.11357563413062391 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1199 0.1099089469916207 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1173 0.10752560035126864 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1156 0.10596725831719227 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1138 0.10431724910464084 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 9.166717847507982E-5 0.0 10 0.0 0.0 0.0 2.7500153542523944E-4 0.0 11 0.0 0.0 0.0 3.666687139003193E-4 0.0 12 0.0 0.0 0.0 8.250046062757184E-4 0.0 13 0.0 0.0 0.0 8.250046062757184E-4 0.0 14 0.0 0.0 0.0 9.166717847507982E-4 0.0 15 0.0 0.0 0.0 0.0013750076771261973 0.0 16 0.0 0.0 0.0 0.0021083451049268356 0.0 17 0.0 0.0 0.0 0.0031166840681527137 0.0 18 0.0 0.0 0.0 0.0036666871390031927 0.0 19 0.0 0.0 0.0 0.004491691745278911 0.0 20 0.0 0.0 0.0 0.006966705564106067 0.0 21 0.0 0.0 0.0 0.011825066023285296 0.0 22 0.0 0.0 0.0 0.019066773122816603 0.0 23 0.0 0.0 0.0 0.02520847408064695 9.166717847507982E-5 24 0.0 0.0 0.0 0.03217517964475302 9.166717847507982E-5 25 0.0 0.0 0.0 0.03611686831918145 9.166717847507982E-5 26 0.0 0.0 0.0 0.043358575418712755 9.166717847507982E-5 27 0.0 0.0 0.0 0.10165890092886352 9.166717847507982E-5 28 0.0 0.0 0.0 0.2121178509913347 9.166717847507982E-5 29 0.0 0.0 0.0 0.3425602459613733 9.166717847507982E-5 30 0.0 0.0 0.0 0.5572447779500103 9.166717847507982E-5 31 0.0 0.0 0.0 0.8172128961053365 9.166717847507982E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3680 0.0 28.403534 1 GTATTGG 170 0.0 20.676472 1 TTCCGTC 65 6.901716E-5 19.923079 7 ATTGGAC 210 0.0 18.500002 3 TGCGAGA 70 1.2191252E-4 18.5 27 TGTACTA 70 1.2191252E-4 18.5 5 TTGGACC 475 0.0 18.305264 4 AATGCGT 75 2.0671441E-4 17.266668 6 GTATCAA 6075 0.0 17.236214 2 CGAACTA 65 0.0015798637 17.076925 24 GGACCCT 510 0.0 17.049019 6 GACCCTC 505 0.0 16.851486 7 TGGACCC 495 0.0 16.81818 5 CTAATAC 145 2.9776857E-9 16.586206 3 GCGAACT 70 0.0025923804 15.857142 23 ATGCGTT 70 0.0025923804 15.857142 7 TACCCCG 95 7.0591464E-5 15.578948 5 TATAGAC 85 5.363838E-4 15.235294 3 TGCGTTA 85 5.363838E-4 15.235294 8 CGTTAAC 75 0.004104227 14.800001 10 >>END_MODULE