##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088093_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 848122 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.604052247200286 31.0 31.0 34.0 30.0 34.0 2 31.812075385380876 31.0 31.0 34.0 30.0 34.0 3 31.88134136362457 31.0 31.0 34.0 30.0 34.0 4 35.59092441889256 37.0 35.0 37.0 33.0 37.0 5 35.4732267291734 37.0 35.0 37.0 33.0 37.0 6 35.50261990609842 37.0 35.0 37.0 33.0 37.0 7 35.37027220140499 37.0 35.0 37.0 33.0 37.0 8 35.373617239029294 37.0 35.0 37.0 33.0 37.0 9 36.94828574190977 39.0 37.0 39.0 33.0 39.0 10 36.79416522622925 39.0 37.0 39.0 32.0 39.0 11 36.850724306172935 39.0 37.0 39.0 33.0 39.0 12 36.72721966886839 39.0 35.0 39.0 32.0 39.0 13 36.749879144745684 39.0 35.0 39.0 32.0 39.0 14 37.763100120029904 40.0 37.0 41.0 32.0 41.0 15 37.76651354404201 39.0 37.0 41.0 32.0 41.0 16 37.64147021301181 39.0 36.0 41.0 32.0 41.0 17 37.64316454472352 39.0 37.0 41.0 32.0 41.0 18 37.61978465362294 39.0 36.0 41.0 32.0 41.0 19 37.642389892020255 39.0 37.0 41.0 32.0 41.0 20 37.56658004390878 39.0 36.0 41.0 32.0 41.0 21 37.477110604370594 39.0 36.0 41.0 32.0 41.0 22 37.37713677985007 39.0 36.0 41.0 32.0 41.0 23 37.16800648963239 39.0 36.0 41.0 31.0 41.0 24 37.03623181570576 39.0 36.0 40.0 31.0 41.0 25 36.891464907171375 39.0 36.0 40.0 30.0 41.0 26 37.023685271694404 39.0 36.0 40.0 31.0 41.0 27 36.95950228858584 39.0 36.0 41.0 31.0 41.0 28 36.877801778517714 39.0 36.0 41.0 30.0 41.0 29 36.77260582793513 39.0 35.0 40.0 30.0 41.0 30 36.57212405762378 39.0 35.0 40.0 30.0 41.0 31 36.40586495810744 38.0 35.0 40.0 30.0 41.0 32 36.26463999283122 38.0 35.0 40.0 30.0 41.0 33 36.11120569918007 38.0 35.0 40.0 30.0 41.0 34 35.9781953539703 38.0 35.0 40.0 29.0 41.0 35 35.78758126778931 38.0 35.0 40.0 28.0 41.0 36 35.66882830536173 38.0 35.0 40.0 27.0 41.0 37 35.526097660478094 38.0 34.0 40.0 27.0 41.0 38 35.4377990430622 38.0 34.0 40.0 26.0 41.0 39 35.36007319701647 38.0 34.0 40.0 26.0 41.0 40 35.20242017068299 38.0 34.0 40.0 25.0 41.0 41 35.07909475287754 38.0 34.0 40.0 24.0 41.0 42 34.89080580388199 38.0 34.0 40.0 24.0 41.0 43 34.56071532161646 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 1.0 15 2.0 16 11.0 17 21.0 18 50.0 19 124.0 20 295.0 21 560.0 22 1034.0 23 1895.0 24 3078.0 25 4668.0 26 6964.0 27 10059.0 28 13479.0 29 17843.0 30 22633.0 31 28433.0 32 35460.0 33 44441.0 34 54333.0 35 67531.0 36 86827.0 37 117446.0 38 158582.0 39 172350.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.57718111309458 21.72894937284966 14.076630484765163 23.617239029290598 2 18.690825140722676 22.93278561339053 35.606551887582214 22.769837358304585 3 19.242043007963478 24.7084735450796 32.688339649248576 23.361143797708348 4 13.908965927071812 16.447162082813556 36.50123449220749 33.14263749790714 5 12.45068516086129 38.3825676023025 35.52755381890813 13.63919341792808 6 32.327778314912244 37.519955855407595 13.767948479110318 16.384317350569848 7 25.75796878279304 33.13921817851677 21.990114629734872 19.112698408955314 8 26.13114622660419 35.360360891475516 19.40180775878942 19.10668512313087 9 24.36524462282549 14.697413815465227 22.01864826050969 38.91869330119959 10 16.10298990003797 27.69424681826435 34.26016540073244 21.942597880965238 11 33.00268121803231 22.535083396020855 23.52196971662096 20.940265669325875 12 20.740648161467337 26.980198603502796 31.159668066622494 21.119485168407376 13 30.786018992550602 21.426398560584445 26.578133806221278 21.20944864064368 14 20.421000752250265 22.885976310012 27.478947604236183 29.214075333501548 15 22.37413956954306 29.665071770334926 25.512838954773017 22.447949705348993 16 22.08007810197118 28.62677775131408 26.44195056843237 22.85119357828237 17 21.593709395582238 26.995880309672426 27.01403807471095 24.396372220034383 18 22.824782283680886 26.037055989586406 29.529242255241584 21.60891947149113 19 22.631767599472717 25.207222545812986 30.275243420168323 21.88576643454597 20 23.592714255732076 24.851613329214427 30.339385135629072 21.216287279424424 21 22.615024725216422 25.427591785144116 30.735082924390593 21.222300565248865 22 21.38524882033481 25.767990925833782 30.24246511704684 22.604295136784565 23 22.26590042470305 26.002391165421955 31.14823103279953 20.583477377075468 24 22.400904586840102 25.954992324217507 28.940883504967445 22.703219583974946 25 22.18619491063786 26.2561282457005 29.965146523731256 21.592530319930386 26 21.919959628449682 26.933625115254646 29.728270225274194 21.418145031021478 27 20.98554217435699 26.889881408570936 29.556243087668992 22.56833332940308 28 21.398218652505182 26.286430489953094 29.832736328028282 22.48261452951344 29 21.671174665908914 26.216629211363458 29.21985280419562 22.892343318532006 30 21.91972381331931 26.436173097738298 30.45564199490168 21.18846109404072 31 22.592504380266046 25.967490526127136 30.4076536158713 21.032351477735514 32 21.879399426025973 26.1294955206916 29.52134244837417 22.469762604908254 33 21.73390149058744 25.89403411301676 30.251426092000916 22.120638304394888 34 20.843699373439197 26.49453734250497 30.96429523111062 21.69746805294521 35 20.742416774945113 28.08617156493995 29.597982365744553 21.573429294370385 36 22.48568012620826 26.118058486868634 29.586427424356405 21.809833962566707 37 21.813017466826707 26.65170812689684 29.701269392846786 21.83400501342967 38 21.712324406158547 25.43902881896708 30.66752188953948 22.181124885334892 39 21.127620790405153 25.22490868059076 31.521172661480307 22.126297867523775 40 20.089798401645044 25.683215386465623 31.187376344441013 23.039609867448316 41 21.41696595536963 24.788886504535903 31.328629607532875 22.46551793256159 42 20.173866495622093 26.721509405486476 30.670705393799473 22.43391870509196 43 20.614840789414732 26.624471479339057 29.78368678091124 22.977000950334975 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 56.0 1 81.5 2 107.0 3 235.0 4 363.0 5 363.0 6 675.0 7 987.0 8 1093.5 9 1200.0 10 1954.5 11 2709.0 12 2709.0 13 5284.0 14 7859.0 15 12159.0 16 16459.0 17 15846.0 18 15233.0 19 15233.0 20 16684.0 21 18135.0 22 15289.5 23 12444.0 24 14148.5 25 15853.0 26 15853.0 27 17898.5 28 19944.0 29 21338.0 30 22732.0 31 25042.5 32 27353.0 33 27353.0 34 30930.0 35 34507.0 36 37521.5 37 40536.0 38 42931.0 39 45326.0 40 45326.0 41 47103.5 42 48881.0 43 51204.0 44 53527.0 45 56018.5 46 58510.0 47 58510.0 48 73148.5 49 87787.0 50 80565.5 51 73344.0 52 67293.0 53 61242.0 54 61242.0 55 54850.0 56 48458.0 57 41926.5 58 35395.0 59 32122.0 60 28849.0 61 28849.0 62 25649.5 63 22450.0 64 19385.0 65 16320.0 66 13845.5 67 11371.0 68 11371.0 69 9527.0 70 7683.0 71 6367.0 72 5051.0 73 4112.0 74 3173.0 75 3173.0 76 2554.0 77 1935.0 78 1495.5 79 1056.0 80 829.0 81 602.0 82 602.0 83 455.5 84 309.0 85 241.0 86 173.0 87 140.0 88 107.0 89 107.0 90 84.5 91 62.0 92 39.5 93 17.0 94 14.5 95 12.0 96 12.0 97 7.5 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 848122.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.55118881582497 #Duplication Level Percentage of deduplicated Percentage of total 1 83.72807573157388 49.861064470766486 2 9.834124811025905 11.712676469195854 3 2.746824045090713 4.907299120591356 4 1.1301282044819334 2.692019123647715 5 0.5839550439922201 1.738760854236704 6 0.3758637383497614 1.3429879470893085 7 0.25341778379685526 1.0563931204522106 8 0.18397821402247094 0.8764897089000339 9 0.13902442437237808 0.745116277122978 >10 0.8919009693397808 10.154997208115603 >50 0.08204885712009562 3.3754160948808356 >100 0.044499731818482484 5.089915769896095 >500 0.003575871299318309 1.5695405457543201 >1k 0.0019865951662879494 2.233699784758221 >5k 5.959785498863848E-4 2.6436235045922993 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8063 0.9506886980882469 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7877 0.9287578909638 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6406 0.7553158625763746 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3163 0.3729416286807794 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2179 0.25692058453854516 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2170 0.2558594164518784 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2130 0.2511431138444705 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2015 0.2375837438481728 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2002 0.2360509455007652 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1884 0.22213785280891193 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1138 0.13417880918075467 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1135 0.13382508648519906 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1065 0.12557155692223526 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 992 0.11696430466371582 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 974 0.11484196849038228 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 891 0.1050556405800109 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 890 0.1049377330148257 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 886 0.10446610275408491 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.5372269555559223E-4 0.0 10 1.1790756518519741E-4 0.0 0.0 4.7163026074078965E-4 0.0 11 1.1790756518519741E-4 0.0 0.0 8.253529562963819E-4 0.0 12 1.1790756518519741E-4 0.0 0.0 0.001414890782222369 0.0 13 1.1790756518519741E-4 0.0 0.0 0.001414890782222369 0.0 14 1.1790756518519741E-4 0.0 0.0 0.001414890782222369 0.0 15 1.1790756518519741E-4 0.0 0.0 0.0022402437385187508 0.0 16 1.1790756518519741E-4 0.0 0.0 0.003065596694815133 0.0 17 1.1790756518519741E-4 0.0 0.0 0.004716302607407897 0.0 18 1.1790756518519741E-4 0.0 0.0 0.005423747998519081 0.0 19 1.1790756518519741E-4 0.0 0.0 0.0066028236503710555 0.0 20 1.1790756518519741E-4 0.0 0.0 0.00955051278000099 0.0 21 1.1790756518519741E-4 0.0 0.0 0.017096596951853626 0.0 22 1.1790756518519741E-4 0.0 0.0 0.028533630774817773 0.0 23 1.1790756518519741E-4 0.0 0.0 0.03607971494667041 0.0 24 1.1790756518519741E-4 0.0 0.0 0.0455123201614862 0.0 25 1.1790756518519741E-4 0.0 0.0 0.05105397572519048 0.0 26 1.1790756518519741E-4 0.0 0.0 0.059897043114080284 0.0 27 1.1790756518519741E-4 0.0 0.0 0.11271963231704872 0.0 28 1.1790756518519741E-4 0.0 0.0 0.22084086959187477 0.0 29 1.1790756518519741E-4 0.0 0.0 0.35289734259929584 0.0 30 1.1790756518519741E-4 0.0 0.0 0.5615937329770953 0.0 31 1.1790756518519741E-4 0.0 0.0 0.8338423009897161 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGTAC 25 1.2333533E-4 36.999996 1 GGTATCA 2185 0.0 28.956524 1 CCGTGTA 40 0.0019307723 23.125 9 ATAGTAC 60 3.7248043E-5 21.583332 3 ACTATCC 45 0.0038249937 20.555555 3 TTTCACG 45 0.0038249937 20.555555 29 GTATTGG 275 0.0 20.181818 1 GATAGCA 65 6.899406E-5 19.923077 2 TAGGACC 85 1.2445198E-6 19.588236 4 ACTACCC 50 0.0070334007 18.499998 8 ATGCGAA 50 0.0070334007 18.499998 22 TTGGACC 405 0.0 18.271605 4 GTATCAA 3515 0.0 18.0 2 ATTGGAC 280 0.0 17.839287 3 CAATCTA 75 2.0664615E-4 17.266666 10 TCGAACC 110 7.801664E-7 16.818182 31 CCAGTAC 125 1.6560989E-7 16.279999 3 CCTAGAC 70 0.002591742 15.857143 3 TTATGCG 95 7.056189E-5 15.578948 4 ACGGGCG 85 5.3620915E-4 15.235294 5 >>END_MODULE