##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088092_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5251168 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.569329909079276 31.0 31.0 34.0 30.0 34.0 2 31.771961399825717 31.0 31.0 34.0 30.0 34.0 3 31.83799204291312 31.0 31.0 34.0 30.0 34.0 4 35.53640580533702 37.0 35.0 37.0 33.0 37.0 5 35.43573258368424 37.0 35.0 37.0 33.0 37.0 6 35.470433434999606 37.0 35.0 37.0 33.0 37.0 7 35.32289692502697 37.0 35.0 37.0 32.0 37.0 8 35.36902399618523 37.0 35.0 37.0 33.0 37.0 9 36.90286389618462 39.0 37.0 39.0 33.0 39.0 10 36.750974259440945 39.0 35.0 39.0 32.0 39.0 11 36.80009266509851 39.0 37.0 39.0 32.0 39.0 12 36.67580850584098 39.0 35.0 39.0 32.0 39.0 13 36.7008107529601 39.0 35.0 39.0 32.0 39.0 14 37.674879760083854 39.0 37.0 41.0 32.0 41.0 15 37.68293530125107 39.0 37.0 41.0 32.0 41.0 16 37.56230918530887 39.0 36.0 41.0 32.0 41.0 17 37.59193802216954 39.0 36.0 41.0 32.0 41.0 18 37.576965543665715 39.0 36.0 41.0 32.0 41.0 19 37.618680644001486 39.0 37.0 41.0 32.0 41.0 20 37.53737797000591 39.0 36.0 41.0 32.0 41.0 21 37.45403270281964 39.0 36.0 41.0 32.0 41.0 22 37.34090396650802 39.0 36.0 41.0 31.0 41.0 23 37.124637414000084 39.0 36.0 41.0 31.0 41.0 24 36.97505164565293 39.0 36.0 40.0 31.0 41.0 25 36.8255091057837 39.0 35.0 40.0 30.0 41.0 26 36.982491133401176 39.0 36.0 40.0 31.0 41.0 27 36.90674455663959 39.0 36.0 41.0 31.0 41.0 28 36.821545035314045 39.0 35.0 41.0 30.0 41.0 29 36.73038207880609 39.0 35.0 40.0 30.0 41.0 30 36.488923987958486 39.0 35.0 40.0 30.0 41.0 31 36.27342183681802 38.0 35.0 40.0 30.0 41.0 32 36.11377354523793 38.0 35.0 40.0 30.0 41.0 33 35.92681113992163 38.0 35.0 40.0 29.0 41.0 34 35.78239317424238 38.0 35.0 40.0 28.0 41.0 35 35.571002870218585 38.0 34.0 40.0 27.0 41.0 36 35.4668492800078 38.0 34.0 40.0 27.0 41.0 37 35.27845919231683 38.0 34.0 40.0 26.0 41.0 38 35.163956475968774 38.0 34.0 40.0 25.0 41.0 39 35.04709999756245 38.0 34.0 40.0 24.0 41.0 40 34.84356946873534 38.0 33.0 40.0 24.0 41.0 41 34.67360899517974 38.0 33.0 40.0 23.0 41.0 42 34.4299125451709 38.0 33.0 40.0 22.0 41.0 43 34.090646499978675 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 4.0 12 5.0 13 6.0 14 14.0 15 28.0 16 72.0 17 165.0 18 413.0 19 972.0 20 1981.0 21 4094.0 22 7566.0 23 13356.0 24 21592.0 25 32928.0 26 48198.0 27 67530.0 28 90724.0 29 118252.0 30 148386.0 31 182680.0 32 225321.0 33 277260.0 34 340067.0 35 416132.0 36 534239.0 37 729401.0 38 961869.0 39 1027911.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.25123553464677 22.093656116125022 14.632306564939457 23.022801784288752 2 18.79437108087191 23.64470152164242 35.342556170360574 22.21837122712509 3 19.324767366041232 24.706027306686817 33.48639769285614 22.48280763441581 4 13.568010012248704 16.58410090859786 36.40313926349338 33.44474981566006 5 12.008261780998057 38.96992059671296 35.26853454317211 13.753283079116873 6 31.81456011310246 37.79191600801955 13.172288527047696 17.2212353518303 7 25.254743325675356 33.96465319715538 21.419025253048467 19.361578224120805 8 26.770387083406966 35.05145902778201 18.78437330513897 19.39378058367205 9 24.119662520795373 14.678448680369776 22.41924082413665 38.7826479746982 10 16.23343606603331 28.087560710302927 33.54011907446115 22.138884149202614 11 32.63365407467443 22.558828816750864 23.89925441349429 20.90826269508041 12 21.0203330002011 27.60067855379984 30.842147880243026 20.536840565756037 13 31.46061980877397 21.40771348393348 26.749153712088436 20.382512995204113 14 20.229137593769615 23.337550807744105 28.125571301470455 28.307740297015826 15 22.024242987464884 29.867279051060642 26.264518674702465 21.843959286772012 16 21.47312750230044 28.80972385572124 27.04891559363555 22.668233048342767 17 21.455131505981146 27.104884094357672 27.0544762612813 24.38550813837988 18 22.95607377253975 25.65848207484506 30.129125558351973 21.256318594263217 19 22.591507260860823 24.553185119958073 31.36108004923857 21.494227569942534 20 23.599511575329526 24.133164278880432 31.38252289776294 20.884801248027106 21 22.29629674769499 25.25527654038111 32.05064092407632 20.39778578784758 22 20.716705312037245 25.522759888847585 31.48451925362129 22.27601554549388 23 22.054179184516663 25.675125991017616 32.55797567322165 19.712719151244066 24 21.912896330873437 25.622680516029956 29.814319404749572 22.650103748347032 25 21.718349136801564 26.158009037227526 31.071201683130305 21.052440142840602 26 21.544825836842392 26.852273627505348 30.811278557456166 20.79162197819609 27 20.238297460679224 26.984510874533058 30.340240495067 22.436951169720718 28 20.743004223060467 26.36887640997203 30.778352549375683 22.10976681759182 29 21.202806689864044 26.143555110025048 29.920372001048147 22.73326619906276 30 21.42639504201732 26.422350227606508 31.630029738145875 20.521224992230298 31 22.34820900797689 26.100383762241087 31.29507568601881 20.256331543763217 32 21.721091383859743 26.027580911522925 30.278387589199202 21.972940115418133 33 21.218022352360467 25.913111140226324 31.166323377960865 21.70254312945234 34 20.283201756256894 26.664048836373166 31.89928412117076 21.153465286199186 35 19.911741540167828 28.873995271147297 30.365130195796443 20.84913299288844 36 22.326899463128967 26.265927884996255 30.277359246552386 21.1298134053224 37 21.41317893466749 27.081175083333843 30.22291421641814 21.282731765580536 38 21.169785464871815 25.38865639034973 31.649587291817742 21.791970852960713 39 20.72754099659352 25.273291580082756 32.380586566645746 21.61858085667798 40 19.33480322853887 25.986847116679566 31.896979871906595 22.78136978287497 41 21.126652203852554 24.85873618973912 31.998995271147297 22.015616335261033 42 19.610703752003364 27.331309910480865 31.11825788091335 21.939728456602417 43 20.16536130628462 27.19322634507218 30.11897543556024 22.522436913082956 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 400.0 1 633.5 2 867.0 3 1642.5 4 2418.0 5 2418.0 6 4579.0 7 6740.0 8 7804.5 9 8869.0 10 14358.5 11 19848.0 12 19848.0 13 39736.5 14 59625.0 15 94392.0 16 129159.0 17 121019.0 18 112879.0 19 112879.0 20 123561.5 21 134244.0 22 108085.0 23 81926.0 24 91916.0 25 101906.0 26 101906.0 27 110869.5 28 119833.0 29 127246.0 30 134659.0 31 148527.0 32 162395.0 33 162395.0 34 181961.5 35 201528.0 36 223309.5 37 245091.0 38 259758.5 39 274426.0 40 274426.0 41 281555.0 42 288684.0 43 304088.5 44 319493.0 45 341712.0 46 363931.0 47 363931.0 48 478834.0 49 593737.0 50 538814.0 51 483891.0 52 434727.0 53 385563.0 54 385563.0 55 335441.5 56 285320.0 57 238941.0 58 192562.0 59 173183.5 60 153805.0 61 153805.0 62 136584.0 63 119363.0 64 104283.0 65 89203.0 66 76020.5 67 62838.0 68 62838.0 69 53375.5 70 43913.0 71 36017.0 72 28121.0 73 23250.5 74 18380.0 75 18380.0 76 14629.0 77 10878.0 78 8749.5 79 6621.0 80 5172.0 81 3723.0 82 3723.0 83 2842.5 84 1962.0 85 1526.0 86 1090.0 87 846.5 88 603.0 89 603.0 90 506.5 91 410.0 92 284.0 93 158.0 94 114.5 95 71.0 96 71.0 97 44.0 98 17.0 99 17.5 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5251168.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.71749103999486 #Duplication Level Percentage of deduplicated Percentage of total 1 70.17165490013875 24.361838002571787 2 13.407980017688036 9.309828522570292 3 5.924217791516025 6.170219342878073 4 3.114084302570174 4.324527754890747 5 1.8492201812389464 3.2100142536570404 6 1.2126745682960949 2.526061107554959 7 0.8149964169515307 1.9806241562199882 8 0.5761468996757487 1.60018998617709 9 0.43751030953505937 1.3670334226069925 >10 2.1301294747648125 13.350828237953374 >50 0.18994009476723217 4.608387239916468 >100 0.14689113256092365 10.12784814277675 >500 0.014996012810396234 3.591027398464 >1k 0.008129705907922427 5.543557490754896 >5k 8.788871251807856E-4 2.119358812954293 >10k+ 5.49304453237991E-4 5.808656128053189 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 64980 1.2374389850029555 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 63748 1.2139775379496522 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 50395 0.9596912534506609 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25099 0.4779698535640071 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 18921 0.36031983741521884 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 18303 0.34855102712387037 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 17267 0.3288220830108654 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 16423 0.3127494683087648 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 15426 0.29376321610734984 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 14027 0.26712152420185376 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 9766 0.18597767201506407 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 8892 0.1693337558425097 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 8325 0.15853615805093269 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 8307 0.15819337716866036 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7866 0.14979524555298937 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 7687 0.14638648011261493 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6956 0.1324657676158904 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 6854 0.13052334261634746 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 6502 0.12382007202968941 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 6298 0.11993522203060349 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 6213 0.11831653453098434 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5707 0.1086805830626634 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5597 0.10658581100433276 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 5571 0.1060906830632728 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 5323 0.10136792424085461 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 5269 0.10033958159403773 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.904338234846038E-5 2 0.0 0.0 0.0 0.0 1.904338234846038E-5 3 0.0 0.0 0.0 0.0 1.904338234846038E-5 4 0.0 0.0 0.0 1.904338234846038E-5 1.904338234846038E-5 5 0.0 0.0 0.0 1.904338234846038E-5 1.904338234846038E-5 6 0.0 0.0 0.0 1.904338234846038E-5 1.904338234846038E-5 7 0.0 0.0 0.0 5.7130147045381144E-5 1.1426029409076229E-4 8 0.0 0.0 0.0 9.52169117423019E-5 1.5234705878768305E-4 9 0.0 0.0 0.0 2.856507352269057E-4 1.7139044113614343E-4 10 0.0 0.0 0.0 4.1895441166612835E-4 1.7139044113614343E-4 11 0.0 0.0 0.0 6.855617645445737E-4 1.7139044113614343E-4 12 0.0 0.0 0.0 0.0010664294115137814 2.6660735287844535E-4 13 1.904338234846038E-5 0.0 0.0 0.0011616463232560833 2.6660735287844535E-4 14 1.904338234846038E-5 0.0 0.0 0.0014853838231799097 2.856507352269057E-4 15 1.904338234846038E-5 0.0 0.0 0.001942424999542959 2.856507352269057E-4 16 1.904338234846038E-5 0.0 0.0 0.002647030146435993 3.046941175753661E-4 17 1.904338234846038E-5 0.0 0.0 0.003808676469692076 3.2373749992382645E-4 18 1.904338234846038E-5 0.0 0.0 0.004570411763630491 3.2373749992382645E-4 19 1.904338234846038E-5 0.0 0.0 0.005808231616280416 3.2373749992382645E-4 20 1.904338234846038E-5 0.0 0.0 0.008969433086124839 3.2373749992382645E-4 21 1.904338234846038E-5 0.0 0.0 0.015177575731722924 3.2373749992382645E-4 22 1.904338234846038E-5 0.0 0.0 0.02443265955307467 3.2373749992382645E-4 23 1.904338234846038E-5 0.0 0.0 0.030107587492915863 3.2373749992382645E-4 24 1.904338234846038E-5 0.0 0.0 0.0381629382263146 3.2373749992382645E-4 25 1.904338234846038E-5 0.0 0.0 0.04277143675464201 3.2373749992382645E-4 26 1.904338234846038E-5 0.0 0.0 0.051264785282055345 3.2373749992382645E-4 27 1.904338234846038E-5 0.0 0.0 0.10426251835782058 3.808676469692076E-4 28 1.904338234846038E-5 0.0 0.0 0.20776330142170274 4.3799779401458875E-4 29 1.904338234846038E-5 0.0 0.0 0.33051694403987836 4.5704117636304915E-4 30 3.808676469692076E-5 0.0 0.0 0.5427744836958178 4.5704117636304915E-4 31 3.808676469692076E-5 0.0 0.0 0.8106006130445645 4.5704117636304915E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 16635 0.0 29.459873 1 GTATTGG 1900 0.0 22.005262 1 ATTGGAC 2260 0.0 19.236727 3 GTATCAA 27865 0.0 17.613672 2 TTGGACC 3345 0.0 16.923767 4 GGACCCT 3445 0.0 15.573295 6 TGGACCC 3495 0.0 15.297566 5 ACGTTTA 315 0.0 15.269841 26 TAATACT 1310 0.0 15.251907 4 GACCCTC 3545 0.0 14.664315 7 TATTGGA 2970 0.0 14.575757 2 CTAGTAC 700 0.0 14.535714 3 TAGTACT 800 0.0 14.337499 4 CAATGCG 415 0.0 14.26506 19 GTACTAG 590 0.0 14.110169 1 CTAATAC 1170 0.0 13.914529 3 TGCGACG 430 0.0 13.767442 22 GGGTAAG 565 0.0 13.752213 1 CTCTAAT 1030 0.0 13.470873 1 CGTTTAG 330 0.0 13.454545 26 >>END_MODULE