##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088091_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3642805 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.273131282075212 31.0 31.0 33.0 30.0 34.0 2 31.4716741631792 31.0 31.0 34.0 30.0 34.0 3 31.52256214647778 31.0 31.0 34.0 30.0 34.0 4 35.27861332132793 37.0 35.0 37.0 33.0 37.0 5 35.14982904657263 35.0 35.0 37.0 32.0 37.0 6 35.19691117147363 37.0 35.0 37.0 32.0 37.0 7 35.04079603492364 37.0 35.0 37.0 32.0 37.0 8 35.0798263975151 37.0 35.0 37.0 32.0 37.0 9 36.57510874175258 39.0 35.0 39.0 32.0 39.0 10 36.40233062159517 38.0 35.0 39.0 32.0 39.0 11 36.47239723235254 38.0 35.0 39.0 32.0 39.0 12 36.33457678904031 38.0 35.0 39.0 32.0 39.0 13 36.38221562779232 38.0 35.0 39.0 32.0 39.0 14 37.25372425919038 39.0 36.0 40.0 32.0 41.0 15 37.2710035261289 39.0 36.0 40.0 32.0 41.0 16 37.11753332939864 39.0 36.0 40.0 31.0 41.0 17 37.19713737078982 39.0 36.0 40.0 31.0 41.0 18 37.19626716225546 39.0 36.0 40.0 31.0 41.0 19 37.242003620836144 39.0 36.0 40.0 31.0 41.0 20 37.178821265480856 39.0 36.0 40.0 31.0 41.0 21 37.08101998322721 39.0 36.0 40.0 31.0 41.0 22 36.99892527873438 39.0 36.0 40.0 31.0 41.0 23 36.80109970201534 39.0 35.0 40.0 30.0 41.0 24 36.642788730113196 39.0 35.0 40.0 30.0 41.0 25 36.5041227845026 38.0 35.0 40.0 30.0 41.0 26 36.57270674658677 38.0 35.0 40.0 30.0 41.0 27 36.4786932048243 38.0 35.0 40.0 30.0 41.0 28 36.37623205194898 38.0 35.0 40.0 30.0 41.0 29 36.259931838240036 38.0 35.0 40.0 30.0 41.0 30 36.02683399193753 38.0 35.0 40.0 29.0 41.0 31 35.81233719619908 38.0 34.0 40.0 29.0 41.0 32 35.6615396651756 38.0 34.0 40.0 28.0 41.0 33 35.47490354273698 38.0 34.0 40.0 27.0 41.0 34 35.32832693487573 38.0 34.0 40.0 27.0 41.0 35 35.09972397644123 38.0 34.0 40.0 26.0 41.0 36 34.97339879570825 38.0 33.0 40.0 25.0 41.0 37 34.7917313718412 38.0 33.0 40.0 25.0 41.0 38 34.65290483569667 38.0 33.0 40.0 24.0 41.0 39 34.54195324756609 38.0 33.0 40.0 24.0 41.0 40 34.3256133666227 38.0 33.0 40.0 23.0 41.0 41 34.162723780163915 38.0 33.0 40.0 22.0 41.0 42 33.933408184077926 38.0 33.0 40.0 20.0 41.0 43 33.57359919073352 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 2.0 14 21.0 15 16.0 16 44.0 17 142.0 18 357.0 19 841.0 20 1778.0 21 3544.0 22 6445.0 23 11207.0 24 18024.0 25 27656.0 26 40388.0 27 55492.0 28 74012.0 29 96266.0 30 120090.0 31 147051.0 32 177523.0 33 215699.0 34 258400.0 35 307552.0 36 385113.0 37 502333.0 38 629545.0 39 563261.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.775008544239945 22.56991521643349 15.36524738491355 22.289828854413013 2 19.052762912096586 24.110678446966006 35.03566619679066 21.80089244414675 3 19.689003391617174 24.831276996709953 33.7081452342357 21.771574377437165 4 14.044424557449547 17.02355739601763 35.914384656878426 33.0176333896544 5 11.905331193956306 39.33004923403806 34.97900656225079 13.785613009754845 6 31.614017220246488 37.812839281817176 13.055873152694147 17.517270345242196 7 24.704753617061577 34.48027001170801 21.35041540790682 19.464560963323592 8 26.714880428680647 35.25006142244781 18.76095481366694 19.2741033352046 9 23.98593940658366 14.703779093308592 22.627755260026273 38.68252624008148 10 16.312649181056905 28.31894652609733 33.378207178259615 21.99019711458615 11 32.46034305981242 22.638735809355705 23.939985807639992 20.960935323191883 12 20.814811662990472 27.963149276450427 31.063232865882195 20.158806194676902 13 31.704524398094325 21.550563370809034 27.072983593686732 19.67192863740991 14 20.020368919006096 23.6602288620994 28.50048245788616 27.818919761008342 15 21.87237582028135 29.991915570556205 26.74628479976282 21.389423809399624 16 21.027916674101412 28.976050049343844 27.569386777497012 22.426646499057732 17 21.07384282167176 27.109960593553595 27.521868450273896 24.29432813450075 18 22.706870117944824 25.506580780469996 30.784793586261138 21.001755515324042 19 22.299107418596385 24.571806616055486 32.170291849275486 20.958794116072642 20 23.29951781662757 23.965872452684124 32.20990418098141 20.524705549706887 21 21.971667437592735 25.054209599470738 33.04714361597725 19.926979346959282 22 20.17052793108607 25.293063998759198 32.51236341226061 22.024044657894123 23 21.736134654476427 25.509874945268823 33.55554304992993 19.19844735032482 24 21.47899764055446 25.53801260292549 30.7342281565991 22.24876159992094 25 21.25104143647546 26.13120932907471 31.860612906812197 20.75713632763763 26 20.945562554130674 26.997080546447037 31.73878371200215 20.31857318742013 27 19.63695558779567 27.061646176504095 31.319326727617863 21.98207150808237 28 20.32153793573908 26.363091079538982 31.566883212249902 21.748487772472036 29 20.666107573696642 25.99944273712153 30.72791434073468 22.606535348447142 30 21.03900702892414 26.305800063412672 32.54162657622354 20.113566331439646 31 21.980040106456425 25.967901109172743 32.19609614019966 19.855962644171182 32 21.296693070312575 26.008584044438283 31.2255253849712 21.469197500277946 33 20.811874366044847 25.881401831830143 32.024607411047256 21.282116391077754 34 19.68219545103293 26.574576459623835 32.90845927794653 20.83476881139671 35 19.399995333266535 28.783368859985643 31.184979706572268 20.63165610017555 36 21.993216765651745 26.157095974118842 31.025844095415483 20.823843164813926 37 21.050783668079955 27.090964243213676 31.03095005085367 20.8273020378527 38 20.80605467490025 25.25853017111814 32.508959441968486 21.42645571201313 39 20.26874894483784 25.131183250270052 33.24589155883996 21.354176246052152 40 18.823818458577936 25.780710194479255 32.746962848683914 22.648508498258895 41 20.65770745345963 24.814559110355894 32.840324969357404 21.687408466827073 42 19.2852760441473 27.303053553511646 31.82942814671661 21.582242255624443 43 19.811271808400395 27.327567629889604 30.66831740924919 22.19284315246081 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 275.0 1 409.0 2 543.0 3 1153.5 4 1764.0 5 1764.0 6 3271.0 7 4778.0 8 5729.5 9 6681.0 10 10884.0 11 15087.0 12 15087.0 13 29904.0 14 44721.0 15 73138.5 16 101556.0 17 95313.0 18 89070.0 19 89070.0 20 96969.0 21 104868.0 22 83597.5 23 62327.0 24 67722.5 25 73118.0 26 73118.0 27 78996.0 28 84874.0 29 89829.5 30 94785.0 31 104203.0 32 113621.0 33 113621.0 34 126235.5 35 138850.0 36 153050.5 37 167251.0 38 175935.5 39 184620.0 40 184620.0 41 192396.5 42 200173.0 43 208777.0 44 217381.0 45 234861.0 46 252341.0 47 252341.0 48 341194.0 49 430047.0 50 385876.0 51 341705.0 52 302189.0 53 262673.0 54 262673.0 55 225643.0 56 188613.0 57 157373.0 58 126133.0 59 112157.0 60 98181.0 61 98181.0 62 86405.0 63 74629.0 64 64983.5 65 55338.0 66 46512.5 67 37687.0 68 37687.0 69 31947.0 70 26207.0 71 21696.5 72 17186.0 73 14038.5 74 10891.0 75 10891.0 76 8712.5 77 6534.0 78 5127.0 79 3720.0 80 2919.5 81 2119.0 82 2119.0 83 1643.0 84 1167.0 85 884.0 86 601.0 87 485.0 88 369.0 89 369.0 90 277.5 91 186.0 92 136.0 93 86.0 94 61.0 95 36.0 96 36.0 97 21.5 98 7.0 99 6.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3642805.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.599633453243506 #Duplication Level Percentage of deduplicated Percentage of total 1 71.75079914108635 27.695545468232314 2 13.739521109316815 10.606809572854612 3 5.649181338888598 6.541689869760098 4 2.8850911861165693 4.454538490531324 5 1.6303320403090744 3.146510958150444 6 0.9604126410644598 2.22429455453698 7 0.6505215023774694 1.7576924081656515 8 0.4329721707882932 1.337005367030661 9 0.32157133409665317 1.1171282062681185 >10 1.6804260655619332 11.89130139749244 >50 0.16073633602814227 4.301533594435555 >100 0.12036912201167467 9.15136976936818 >500 0.010282631537979425 2.7033971238264174 >1k 0.006498051874084953 5.298995732254392 >5k 5.71257307611864E-4 1.3150812447130134 >10k+ 7.140716345148299E-4 6.457106242379868 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 50547 1.387584567386945 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 50118 1.3758079282311295 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 39045 1.07183887141914 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18103 0.49695221127674966 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 14626 0.4015037862306657 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 14014 0.38470354575663535 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 13649 0.37468379449352907 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 12630 0.3467108450768021 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 11243 0.30863579027699806 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10293 0.2825569856195981 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 7740 0.21247362952450102 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6221 0.17077499344598462 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6075 0.1667670929407421 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5838 0.16026111746305388 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5825 0.15990424960984737 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5493 0.15079039366641914 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5392 0.1480178049607377 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5128 0.14077064240331283 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4720 0.12957048208729263 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4558 0.12512335960887283 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4530 0.12435472115581263 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 4406 0.12095075086368884 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4396 0.12067623713045304 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4223 0.11592714954547388 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4104 0.112660436119968 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3821 0.10489169746939514 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.7451373323578945E-5 0.0 5 0.0 0.0 0.0 2.7451373323578945E-5 0.0 6 2.7451373323578945E-5 0.0 0.0 2.7451373323578945E-5 0.0 7 5.490274664715789E-5 0.0 0.0 2.7451373323578945E-5 0.0 8 8.235411997073684E-5 0.0 0.0 2.7451373323578945E-5 0.0 9 8.235411997073684E-5 0.0 0.0 1.3725686661789473E-4 0.0 10 8.235411997073684E-5 0.0 0.0 4.392219731772631E-4 0.0 11 8.235411997073684E-5 0.0 0.0 6.862843330894737E-4 0.0 12 8.235411997073684E-5 0.0 0.0 9.607980663252631E-4 0.0 13 1.0980549329431578E-4 0.0 0.0 0.0011255063062667367 0.0 14 1.0980549329431578E-4 0.0 0.0 0.0012353117995610526 0.0 15 1.0980549329431578E-4 0.0 0.0 0.0017019851460618946 0.0 16 1.0980549329431578E-4 0.0 0.0 0.002552977719092842 0.0 17 1.0980549329431578E-4 0.0 0.0 0.0037882895186538944 0.0 18 1.0980549329431578E-4 0.0 0.0 0.00441967110509621 0.0 19 1.0980549329431578E-4 0.0 0.0 0.005682434277980842 0.0 20 1.0980549329431578E-4 0.0 0.0 0.01015700812972421 0.0 21 1.0980549329431578E-4 0.0 0.0 0.01737671931382547 0.0 22 1.0980549329431578E-4 0.0 0.0 0.028714136496463576 0.0 23 1.0980549329431578E-4 0.0 0.0 0.034478924894415154 0.0 24 1.0980549329431578E-4 0.0 0.0 0.042522177278223786 0.0 25 1.0980549329431578E-4 0.0 0.0 0.04765558408973305 0.0 26 1.0980549329431578E-4 0.0 0.0 0.05608315570007179 0.0 27 1.0980549329431578E-4 0.0 0.0 0.11392319929285262 0.0 28 1.0980549329431578E-4 0.0 0.0 0.23514846388977725 0.0 29 1.0980549329431578E-4 0.0 0.0 0.37800541066568205 0.0 30 1.0980549329431578E-4 0.0 0.0 0.6130989718088121 0.0 31 1.0980549329431578E-4 0.0 0.0 0.9203347420463077 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12040 0.0 30.346762 1 GTATTGG 950 0.0 18.694736 1 GTATCAA 20520 0.0 17.814814 2 ACGTTTA 325 0.0 16.507692 26 ATTGGAC 1220 0.0 16.225409 3 TTAACGG 360 0.0 15.930556 35 TTGGACC 1960 0.0 15.385205 4 TTTTTAC 2390 0.0 15.248955 1 TCACGTT 365 0.0 14.69863 24 GGACCCT 1915 0.0 14.587467 6 GTATTAG 650 0.0 14.230769 1 TGGACCC 1995 0.0 14.095238 5 TAAACGT 320 0.0 13.875 4 TGCGACG 160 1.7865932E-7 13.875 22 GATACTG 1485 0.0 13.703704 36 TAACGGC 420 0.0 13.654763 36 TATACTG 365 0.0 13.178082 5 TGATACT 1550 0.0 13.129033 35 CGCCGGA 325 0.0 13.092307 14 CAATGCG 170 3.7376958E-7 13.058824 19 >>END_MODULE