##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088089_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4160700 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.59086187420386 31.0 31.0 34.0 30.0 34.0 2 31.785659143894055 31.0 31.0 34.0 30.0 34.0 3 31.858347153123272 31.0 31.0 34.0 30.0 34.0 4 35.55558151272622 37.0 35.0 37.0 33.0 37.0 5 35.44838801163266 37.0 35.0 37.0 33.0 37.0 6 35.48456990410268 37.0 35.0 37.0 33.0 37.0 7 35.346460932054704 37.0 35.0 37.0 33.0 37.0 8 35.38722835099863 37.0 35.0 37.0 33.0 37.0 9 36.93422404883793 39.0 37.0 39.0 33.0 39.0 10 36.78196817843151 39.0 37.0 39.0 32.0 39.0 11 36.822815631985 39.0 37.0 39.0 32.0 39.0 12 36.700578027735716 39.0 35.0 39.0 32.0 39.0 13 36.73710337202875 39.0 35.0 39.0 32.0 39.0 14 37.72478717523494 39.0 37.0 41.0 32.0 41.0 15 37.725865118850194 39.0 37.0 41.0 32.0 41.0 16 37.60657125003004 39.0 36.0 41.0 32.0 41.0 17 37.63204508856683 39.0 36.0 41.0 32.0 41.0 18 37.61893984185353 39.0 36.0 41.0 32.0 41.0 19 37.65888191890787 39.0 37.0 41.0 32.0 41.0 20 37.585974956137186 39.0 36.0 41.0 32.0 41.0 21 37.49818732424832 39.0 36.0 41.0 32.0 41.0 22 37.391055591607184 39.0 36.0 41.0 32.0 41.0 23 37.19723339822626 39.0 36.0 41.0 31.0 41.0 24 37.05208474535535 39.0 36.0 41.0 31.0 41.0 25 36.89827721296897 39.0 36.0 40.0 30.0 41.0 26 37.06915831470666 39.0 36.0 41.0 31.0 41.0 27 37.005021991491816 39.0 36.0 41.0 31.0 41.0 28 36.93323767635254 39.0 36.0 41.0 31.0 41.0 29 36.84345014060134 39.0 35.0 40.0 30.0 41.0 30 36.61634027927993 39.0 35.0 40.0 30.0 41.0 31 36.41064652582498 38.0 35.0 40.0 30.0 41.0 32 36.27142716369842 38.0 35.0 40.0 30.0 41.0 33 36.099441440142286 38.0 35.0 40.0 30.0 41.0 34 35.965994664359364 38.0 35.0 40.0 29.0 41.0 35 35.75672771408657 38.0 35.0 40.0 28.0 41.0 36 35.65265195760329 38.0 35.0 40.0 27.0 41.0 37 35.480475881462255 38.0 34.0 40.0 27.0 41.0 38 35.38912634893167 38.0 34.0 40.0 26.0 41.0 39 35.278960751796575 38.0 34.0 40.0 25.0 41.0 40 35.09530535727161 38.0 34.0 40.0 24.0 41.0 41 34.94143317230274 38.0 34.0 40.0 24.0 41.0 42 34.72751171677843 38.0 33.0 40.0 23.0 41.0 43 34.39768043838777 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 2.0 13 6.0 14 12.0 15 13.0 16 52.0 17 98.0 18 268.0 19 602.0 20 1374.0 21 2773.0 22 5300.0 23 9193.0 24 15465.0 25 24176.0 26 34757.0 27 50188.0 28 67666.0 29 89497.0 30 114113.0 31 141832.0 32 175456.0 33 216083.0 34 265898.0 35 326455.0 36 420292.0 37 574396.0 38 772640.0 39 852089.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.216045376979835 22.05145768740837 14.61972744970798 23.112769485903815 2 18.51558631960968 23.561275746869516 35.71514408633163 22.207993847189176 3 19.06984401663182 24.748599995193114 33.397048573557335 22.78450741461773 4 13.449635878578123 16.549402744730454 36.75182060710938 33.24914076958204 5 11.852548849953132 39.01963611892229 35.62537553777009 13.502439493354485 6 31.6995457495133 38.255173408320715 13.35616602975461 16.689114812411372 7 25.279496238613696 33.882736078063786 21.603888768716804 19.233878914605715 8 26.45997067801091 35.47753983704665 18.97644627106016 19.086043213882277 9 24.15845891316365 14.741365635590164 22.233061744418006 38.86711370682818 10 15.997452351767732 28.227750138197898 33.89946403249453 21.875333477539836 11 32.78825678371428 22.70541014733098 23.776191506236934 20.73014156271781 12 20.806907491527866 27.709928617780662 31.03201384382436 20.451150046867113 13 31.095873290552074 21.632682000624897 26.754007739082365 20.517436969740668 14 20.212608455308 23.26437859014108 28.137741245463506 28.385271709087412 15 21.915014300478287 30.019323671497585 26.270074747037757 21.79558728098637 16 21.42187612661331 29.0833513591463 26.857259595741102 22.63751291849929 17 21.211743216285722 27.320547023337422 27.250270387194465 24.217439373182398 18 22.687816953877952 25.901362751460088 30.22385656259764 21.186963732064314 19 22.40339365972072 24.884250246352778 31.276660177373998 21.435695916552504 20 23.306943543153796 24.551974427380006 31.38200302833658 20.759079001129617 21 22.146537842190018 25.489100391761 31.85262095320499 20.511740812843993 22 20.597591751387988 25.841108467325206 31.388660561924674 22.172639219362125 23 21.91883577282669 25.944144014228378 32.370851058716084 19.766169154228855 24 21.788665368808132 25.98514673011753 29.738769918523328 22.487417982551015 25 21.573821712692578 26.36231884057971 30.946186939697647 21.117672507030065 26 21.442329415723314 27.095272430119934 30.707861657894103 20.75453649626265 27 20.225659143894056 27.190809238830006 30.344893888047686 22.238637729228255 28 20.75263777729709 26.45494748479823 30.80938303650828 21.9830317013964 29 21.23137933520802 26.253659240031723 29.961232484918405 22.553728939841854 30 21.34599947124282 26.371019299637084 31.639171293291994 20.643809935828106 31 22.16612589227774 26.28682673588579 31.31946547455957 20.2275818972769 32 21.465426490734732 26.138991035162352 30.3892854567741 22.006297017328816 33 21.156247746773378 26.059365010695316 31.28687480472036 21.497512437810943 34 20.181748263513352 26.73105487057466 31.97296128055375 21.11423558535823 35 19.900425409185953 28.728507222342394 30.435143124954934 20.935924243516716 36 22.263104766024945 26.303746965654817 30.32179681303627 21.111351455283966 37 21.26740692671906 27.046386425361117 30.433124233902948 21.253082414016873 38 21.02675030643882 25.505107313673182 31.672771408657198 21.795370971230803 39 20.52930997187973 25.395846852693055 32.47443939721681 21.6004037782104 40 19.30497272093638 26.119042468815344 32.0176412622876 22.55834354796068 41 20.913476097772012 24.985435143124953 32.0864998678107 22.01458889129233 42 19.544043069675777 27.338500733049724 31.28884562693777 21.828610570336725 43 20.09878145504362 27.08657197106256 30.365587521330546 22.44905905256327 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 278.0 1 479.0 2 680.0 3 1321.5 4 1963.0 5 1963.0 6 3485.5 7 5008.0 8 5760.0 9 6512.0 10 10686.0 11 14860.0 12 14860.0 13 29220.0 14 43580.0 15 70682.0 16 97784.0 17 92338.5 18 86893.0 19 86893.0 20 94917.0 21 102941.0 22 83553.0 23 64165.0 24 72249.0 25 80333.0 26 80333.0 27 88989.5 28 97646.0 29 105925.5 30 114205.0 31 125511.0 32 136817.0 33 136817.0 34 153174.0 35 169531.0 36 185749.0 37 201967.0 38 213931.0 39 225895.0 40 225895.0 41 232735.0 42 239575.0 43 251355.5 44 263136.0 45 278692.0 46 294248.0 47 294248.0 48 376719.5 49 459191.0 50 416596.0 51 374001.0 52 337319.5 53 300638.0 54 300638.0 55 261224.0 56 221810.0 57 186863.5 58 151917.0 59 136218.5 60 120520.0 61 120520.0 62 106021.0 63 91522.0 64 79437.5 65 67353.0 66 56376.5 67 45400.0 68 45400.0 69 38226.0 70 31052.0 71 25496.5 72 19941.0 73 16300.5 74 12660.0 75 12660.0 76 10123.5 77 7587.0 78 5968.5 79 4350.0 80 3329.5 81 2309.0 82 2309.0 83 1758.0 84 1207.0 85 905.5 86 604.0 87 450.5 88 297.0 89 297.0 90 240.0 91 183.0 92 137.0 93 91.0 94 65.0 95 39.0 96 39.0 97 23.0 98 7.0 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4160700.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.38066129072535 #Duplication Level Percentage of deduplicated Percentage of total 1 72.18366026950389 29.148239360676246 2 13.850256211269308 11.185650097140616 3 5.5963485786830764 6.779527692619006 4 2.767714219377573 4.4704852176884025 5 1.5650907892918133 3.159970052581336 6 0.90875933508594 2.2017781742934077 7 0.6174196784376565 1.7452270436453698 8 0.4176082133420991 1.3490636652153818 9 0.2951604705003763 1.0726897487118143 >10 1.524091267435863 11.344368766039336 >50 0.14802119626027474 4.18402026056775 >100 0.10752545134260709 8.620682258830538 >500 0.010839825159465287 2.9251434513079 >1k 0.00649198317290649 5.250178524583944 >5k 4.1691635055362777E-4 1.02616316736032 >10k+ 5.955947865051826E-4 5.536812518738684 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 50064 1.203259066983921 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 47090 1.1317807099766866 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 39121 0.9402504386281155 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18483 0.44422813468887445 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 14071 0.338188285625015 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 13683 0.3288629317182205 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 12780 0.3071598529093662 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 11997 0.28834090417477826 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 11668 0.2804335808878314 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 11259 0.27060350421804025 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 7241 0.17403321556468862 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6345 0.15249837767683322 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6282 0.15098420938784338 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6221 0.14951810993342468 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5790 0.13915927608335138 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5652 0.13584252649794507 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5136 0.12344076717859975 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4786 0.11502872112865623 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4555 0.10947677073569351 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4475 0.10755401735284928 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4448 0.10690508808613935 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4407 0.10591967697743168 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4218 0.10137717211046218 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4168 0.10017545124618454 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.403441728555291E-5 0.0 0.0 0.0 0.0 3 2.403441728555291E-5 2.403441728555291E-5 0.0 2.403441728555291E-5 0.0 4 2.403441728555291E-5 2.403441728555291E-5 0.0 2.403441728555291E-5 0.0 5 2.403441728555291E-5 2.403441728555291E-5 0.0 2.403441728555291E-5 0.0 6 7.210325185665874E-5 2.403441728555291E-5 0.0 2.403441728555291E-5 0.0 7 7.210325185665874E-5 2.403441728555291E-5 0.0 2.403441728555291E-5 0.0 8 7.210325185665874E-5 2.403441728555291E-5 0.0 2.403441728555291E-5 0.0 9 7.210325185665874E-5 2.403441728555291E-5 0.0 7.210325185665874E-5 0.0 10 7.210325185665874E-5 4.806883457110582E-5 0.0 2.1630975556997622E-4 0.0 11 7.210325185665874E-5 4.806883457110582E-5 0.0 4.3261951113995244E-4 0.0 12 7.210325185665874E-5 4.806883457110582E-5 0.0 7.210325185665874E-4 0.0 13 7.210325185665874E-5 4.806883457110582E-5 0.0 8.17170187708799E-4 0.0 14 7.210325185665874E-5 4.806883457110582E-5 0.0 0.0011776864469920927 0.0 15 7.210325185665874E-5 9.613766914221164E-5 0.0 0.0016824092099887039 0.0 16 9.613766914221164E-5 9.613766914221164E-5 0.0 0.0024034417285552913 0.0 17 9.613766914221164E-5 9.613766914221164E-5 0.0 0.0037493690965462543 0.0 18 9.613766914221164E-5 9.613766914221164E-5 0.0 0.004662676953397265 0.0 19 9.613766914221164E-5 9.613766914221164E-5 0.0 0.006104741990530439 0.0 20 9.613766914221164E-5 9.613766914221164E-5 0.0 0.009589732496935613 0.0 21 9.613766914221164E-5 9.613766914221164E-5 0.0 0.017304780445598095 0.0 22 9.613766914221164E-5 9.613766914221164E-5 0.0 0.02824044031052467 0.0 23 9.613766914221164E-5 9.613766914221164E-5 0.0 0.03367221861705963 0.0 24 9.613766914221164E-5 9.613766914221164E-5 0.0 0.042036195832432045 0.0 25 9.613766914221164E-5 9.613766914221164E-5 0.0 0.04643449419568822 0.0 26 9.613766914221164E-5 9.613766914221164E-5 0.0 0.054582161655490666 0.0 27 9.613766914221164E-5 9.613766914221164E-5 0.0 0.10649650299228496 0.0 28 9.613766914221164E-5 9.613766914221164E-5 0.0 0.2133535222438532 0.0 29 9.613766914221164E-5 9.613766914221164E-5 0.0 0.3441728555291177 0.0 30 1.2017208642776456E-4 9.613766914221164E-5 0.0 0.5551469704617011 0.0 31 1.4420650371331747E-4 9.613766914221164E-5 0.0 0.8318071478357008 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11980 0.0 28.846409 1 TATGTCG 50 2.703752E-4 22.2 5 GTATTGG 1430 0.0 19.923077 1 TGCGACG 230 0.0 17.695652 22 TTGGACC 2580 0.0 17.352713 4 ATTGGAC 1775 0.0 16.988731 3 GTATCAA 20580 0.0 16.792032 2 TGGACCC 2625 0.0 16.139048 5 CAATGCG 230 0.0 16.086956 19 TAATACT 1285 0.0 15.980544 4 GGACCCT 2620 0.0 15.816794 6 CTAATAC 1100 0.0 15.640909 3 CGTATTA 95 7.066783E-5 15.578948 15 GACCCTC 2635 0.0 15.165086 7 AATACTG 1295 0.0 14.857142 5 CGCGTAT 90 8.280441E-4 14.388888 24 CGAATTA 235 3.6379788E-12 14.170214 15 CGACGAG 315 0.0 14.095239 24 ATACTGG 1105 0.0 13.895926 6 ACCGTCG 215 1.9826984E-10 13.767442 23 >>END_MODULE