##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088087_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1809378 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.618172101130884 31.0 31.0 34.0 30.0 34.0 2 31.82230412882217 31.0 31.0 34.0 30.0 34.0 3 31.893909951375555 31.0 31.0 34.0 30.0 34.0 4 35.596234175501195 37.0 35.0 37.0 33.0 37.0 5 35.48336168561793 37.0 35.0 37.0 33.0 37.0 6 35.51625420448353 37.0 35.0 37.0 33.0 37.0 7 35.38428399151532 37.0 35.0 37.0 33.0 37.0 8 35.398803345680115 37.0 35.0 37.0 33.0 37.0 9 36.973411304879356 39.0 37.0 39.0 33.0 39.0 10 36.81631533046163 39.0 37.0 39.0 32.0 39.0 11 36.879932772477616 39.0 37.0 39.0 33.0 39.0 12 36.75481850669125 39.0 37.0 39.0 32.0 39.0 13 36.79105637406888 39.0 37.0 39.0 32.0 39.0 14 37.795010771657445 40.0 37.0 41.0 32.0 41.0 15 37.792587286901906 40.0 37.0 41.0 32.0 41.0 16 37.67021650534051 39.0 37.0 41.0 32.0 41.0 17 37.68996141215379 39.0 37.0 41.0 32.0 41.0 18 37.67592012282674 39.0 37.0 41.0 32.0 41.0 19 37.702526503583 39.0 37.0 41.0 32.0 41.0 20 37.6230931292411 39.0 37.0 41.0 32.0 41.0 21 37.53666066460408 39.0 36.0 41.0 32.0 41.0 22 37.44408741567544 39.0 36.0 41.0 32.0 41.0 23 37.25035177834593 39.0 36.0 41.0 31.0 41.0 24 37.12046515432375 39.0 36.0 41.0 31.0 41.0 25 36.97586408146888 39.0 36.0 40.0 31.0 41.0 26 37.11680146437063 39.0 36.0 41.0 31.0 41.0 27 37.05780881606828 39.0 36.0 41.0 31.0 41.0 28 36.965447794767044 39.0 36.0 41.0 31.0 41.0 29 36.85948928305749 39.0 35.0 40.0 30.0 41.0 30 36.65978419103139 39.0 35.0 40.0 30.0 41.0 31 36.491694936049846 39.0 35.0 40.0 30.0 41.0 32 36.35931076867299 38.0 35.0 40.0 30.0 41.0 33 36.19451546332497 38.0 35.0 40.0 30.0 41.0 34 36.06082753299753 38.0 35.0 40.0 30.0 41.0 35 35.86370122771472 38.0 35.0 40.0 29.0 41.0 36 35.74272153192976 38.0 35.0 40.0 27.0 41.0 37 35.58168331879795 38.0 34.0 40.0 27.0 41.0 38 35.48792236890246 38.0 34.0 40.0 26.0 41.0 39 35.398441342826096 38.0 34.0 40.0 26.0 41.0 40 35.21951853067739 38.0 34.0 40.0 25.0 41.0 41 35.09200399253224 38.0 34.0 40.0 24.0 41.0 42 34.89817937434853 38.0 34.0 40.0 24.0 41.0 43 34.55840349556588 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 2.0 15 11.0 16 26.0 17 55.0 18 115.0 19 235.0 20 547.0 21 1072.0 22 2083.0 23 3683.0 24 6151.0 25 9438.0 26 14262.0 27 20716.0 28 28130.0 29 37138.0 30 48062.0 31 60036.0 32 74714.0 33 93488.0 34 115752.0 35 143297.0 36 184550.0 37 250790.0 38 336729.0 39 378293.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.27859297504446 21.798209108323412 14.433910437730535 23.489287478901588 2 18.467561780899292 23.21173353494958 35.96882464581751 22.351880038333615 3 19.08926714042063 24.615199256319023 33.195274840304236 23.10025876295611 4 13.554934347604537 16.501250706043734 36.730633399986075 33.213181546365654 5 12.21137871688503 38.511024230426145 35.592120607192086 13.68547644549674 6 31.839283997042077 37.81139153897085 13.577372997792612 16.77195146619446 7 25.46344655456184 33.5988389380218 21.766430231825524 19.17128427559084 8 26.269856271050052 35.38221421947211 19.20168146180621 19.14624804767163 9 24.219704229851363 14.808072166236133 22.271078790612023 38.70114481330048 10 16.008705754132084 27.84669648906972 34.11879662513858 22.02580113165961 11 32.747994062047844 22.51746180179045 24.013003363586822 20.721540772574883 12 20.819530247410988 27.34320855012054 31.063437269603146 20.773823932865326 13 31.030387238045336 21.583328635586373 26.715092147688324 20.671191978679968 14 20.24015987814597 23.28076278146413 27.820389106090605 28.6586882342993 15 22.06023285349993 29.74889713481649 26.123507636325854 22.067362375357717 16 21.57923883235012 29.065734191528804 26.76129587073569 22.593731105385388 17 21.25763660219147 27.114455906947025 27.204984254257543 24.42292323660396 18 22.86780318982545 25.954886154247482 29.975218003092774 21.20209265283429 19 22.486954080352476 25.028822059293304 30.886249307773166 21.597974552581054 20 23.641881353702765 24.57181418144799 30.94732001826042 20.838984446588828 21 22.3750924350799 25.493401599886813 31.47794435435824 20.65356161067505 22 20.858936054268373 25.781622192819853 30.96279494942461 22.396646803487165 23 22.077586883448344 26.03601900763688 31.916271779583923 19.970122329330852 24 21.983853014682396 25.892102147809908 29.499363869793925 22.62468096771377 25 21.76228516097797 26.438698823573624 30.494567746485256 21.304448268963146 26 21.45698687615302 27.05587223896831 30.348661252651464 21.13847963222721 27 20.266025120234687 27.158448925542366 30.095811930950855 22.479714023272084 28 21.02794440962585 26.503251393572818 30.22801205718208 22.240792139619252 29 21.22447603541106 26.348446814319615 29.62869008023752 22.7983870700318 30 21.504406486649003 26.58405264129441 31.189613226202596 20.72192764585399 31 22.30423935739243 26.186070572318222 30.97694345791758 20.532746612371767 32 21.670540926218845 26.15915524561479 30.0829898451291 22.087313983037266 33 21.358555260426513 26.069013771583382 30.808432511061813 21.763998456928295 34 20.35500597442878 26.74068105172054 31.499001314263797 21.405311659586886 35 20.137251585904107 28.660512065472222 30.03087248767256 21.17136386095111 36 22.370007814840235 26.190823586890083 30.062927702226954 21.376240896042727 37 21.470251102865184 26.926932901803823 30.06198815283484 21.540827842496153 38 21.230279134597634 25.460351568329003 31.454731957611955 21.854637339461405 39 20.740165957583216 25.28576118423016 32.19675490693487 21.777317951251757 40 19.455028192008523 25.95311759068586 31.79407509099812 22.797779126307493 41 21.098576416868116 24.916297202685122 31.816182135518396 22.16894424492837 42 19.65570488864129 27.27257654287827 31.070843129517435 22.000875438963003 43 20.119013274174883 27.113184751887115 30.17180489648929 22.595997077448715 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 122.0 1 207.5 2 293.0 3 520.5 4 748.0 5 748.0 6 1400.5 7 2053.0 8 2315.5 9 2578.0 10 4267.5 11 5957.0 12 5957.0 13 11571.5 14 17186.0 15 27814.0 16 38442.0 17 36985.5 18 35529.0 19 35529.0 20 39433.0 21 43337.0 22 36233.0 23 29129.0 24 33042.5 25 36956.0 26 36956.0 27 40622.0 28 44288.0 29 47331.5 30 50375.0 31 55377.5 32 60380.0 33 60380.0 34 67112.0 35 73844.0 36 81139.5 37 88435.0 38 92828.0 39 97221.0 40 97221.0 41 99060.5 42 100900.0 43 105099.0 44 109298.0 45 116495.5 46 123693.0 47 123693.0 48 160956.5 49 198220.0 50 180162.5 51 162105.0 52 146758.5 53 131412.0 54 131412.0 55 115573.5 56 99735.0 57 84437.0 58 69139.0 59 61992.5 60 54846.0 61 54846.0 62 48221.0 63 41596.0 64 36148.0 65 30700.0 66 26060.5 67 21421.0 68 21421.0 69 18179.0 70 14937.0 71 12476.5 72 10016.0 73 8153.5 74 6291.0 75 6291.0 76 5010.0 77 3729.0 78 2952.0 79 2175.0 80 1601.5 81 1028.0 82 1028.0 83 808.0 84 588.0 85 445.0 86 302.0 87 242.0 88 182.0 89 182.0 90 150.5 91 119.0 92 86.0 93 53.0 94 33.0 95 13.0 96 13.0 97 8.5 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1809378.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.40692553515413 #Duplication Level Percentage of deduplicated Percentage of total 1 77.5018999426322 37.51628699355964 2 12.723596033194697 12.318203314364766 3 4.184963044247642 6.0774358335080265 4 1.8554740596946795 3.5927117856020194 5 0.9562235903376382 2.314392206621589 6 0.5727040840511423 1.663370637020538 7 0.3714785868884386 1.2587495405389053 8 0.2528606176841022 0.9792164072805932 9 0.19308333208173964 0.8411913430344188 >10 1.1674887456416174 10.740479016785638 >50 0.12408909295524959 4.191800805374676 >100 0.08399299604564969 7.688372599671009 >500 0.006645855883180343 2.2700202209776412 >1k 0.004468765162828161 3.7241843252969207 >5k 6.875023327427941E-4 1.8795918298458032 >10k+ 3.4375116637139707E-4 2.9439931405177706 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18889 1.0439499098585259 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18846 1.0415734025725967 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15342 0.8479156925750174 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6987 0.3861548001578443 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5795 0.3202758074874349 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5554 0.30695631316397126 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5465 0.3020374957582108 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5057 0.2794883103475338 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5029 0.27794081723111475 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4986 0.2755643099451856 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3139 0.17348503187283143 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2873 0.15878384726685082 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2846 0.1572916217617325 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2747 0.15182012824296526 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2462 0.13606885902227173 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2338 0.12921567522098754 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2309 0.12761291449326784 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2191 0.12109133635978774 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2004 0.11075629304656075 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1979 0.10937460276404377 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1968 0.10876665903973631 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1922 0.10622434891990507 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1839 0.10163713718194872 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.526761130067902E-5 0.0 5 0.0 0.0 0.0 5.526761130067902E-5 0.0 6 0.0 0.0 0.0 5.526761130067902E-5 0.0 7 0.0 0.0 0.0 1.1053522260135804E-4 0.0 8 0.0 0.0 0.0 1.1053522260135804E-4 0.0 9 0.0 0.0 0.0 3.316056678040741E-4 0.0 10 0.0 0.0 0.0 4.974085017061112E-4 0.0 11 0.0 0.0 0.0 0.0010500846147129014 0.0 12 0.0 0.0 0.0 0.0015474931164190125 0.0 13 0.0 0.0 0.0 0.0016027607277196915 0.0 14 0.0 0.0 0.0 0.0018238311729224077 0.0 15 0.0 0.0 0.0 0.0023765072859291978 0.0 16 0.0 0.0 0.0 0.003316056678040741 0.0 17 0.0 0.0 0.0 0.004310873681452963 0.0 18 0.0 0.0 0.0 0.005139887850963149 0.0 19 0.0 0.0 0.0 0.006466310522179445 0.0 20 0.0 0.0 0.0 0.011661465984443273 0.0 21 0.0 0.0 0.0 0.02138856557336278 0.0 22 0.0 0.0 0.0 0.03343690483691081 0.0 23 0.0 0.0 0.0 0.04045589147209704 0.0 24 0.0 0.0 0.0 0.050348793894918586 0.0 25 0.0 0.0 0.0 0.054991273244175624 0.0 26 0.0 0.0 0.0 0.06488417566699717 0.0 27 0.0 0.0 0.0 0.12650756226725426 0.0 28 0.0 0.0 0.0 0.2524071808102011 0.0 29 5.526761130067902E-5 0.0 0.0 0.407045957229501 0.0 30 5.526761130067902E-5 0.0 0.0 0.6412700939217787 0.0 31 1.1053522260135804E-4 0.0 0.0 0.9419258993974725 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4800 0.0 30.0625 1 GTATTGG 670 0.0 20.985075 1 ATTGGAC 695 0.0 19.165468 3 CAATGCG 95 3.6087022E-6 17.526316 19 GTATCAA 8215 0.0 17.49787 2 GTACTAG 205 0.0 17.146341 1 CGACGAG 100 5.881546E-6 16.65 24 TGGACCC 1165 0.0 15.8798275 5 CGCGATA 70 0.0025932658 15.857142 14 GTGCGCG 105 9.348949E-6 15.857142 11 TCTATAC 175 1.3278623E-10 15.857142 3 GGACCCT 1100 0.0 15.640909 6 CTATCCT 225 0.0 15.622222 4 TTGGACC 1175 0.0 15.5872345 4 TGCGCGA 85 5.366265E-4 15.235294 12 TACCGAA 125 2.9608345E-6 14.799999 7 TTAACGG 190 4.5656634E-10 14.605264 35 ACGGTGT 140 5.9998274E-7 14.535714 29 TACGGCT 205 9.276846E-11 14.439024 4 GACCCTC 1165 0.0 14.291845 7 >>END_MODULE