##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088086_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 661018 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93538148734225 31.0 31.0 31.0 28.0 34.0 2 31.14236979930955 31.0 31.0 34.0 28.0 34.0 3 31.0969035638969 31.0 31.0 34.0 28.0 34.0 4 34.88688356444151 35.0 35.0 37.0 32.0 37.0 5 34.70958430784033 35.0 35.0 37.0 32.0 37.0 6 34.862953807611895 35.0 35.0 37.0 32.0 37.0 7 34.70538018631868 35.0 35.0 37.0 31.0 37.0 8 34.806282128474564 35.0 35.0 37.0 32.0 37.0 9 36.199226042256036 38.0 35.0 39.0 32.0 39.0 10 35.9427549627998 37.0 35.0 39.0 30.0 39.0 11 36.08705663083305 37.0 35.0 39.0 31.0 39.0 12 35.874619148041354 37.0 35.0 39.0 30.0 39.0 13 35.97164978865931 37.0 35.0 39.0 30.0 39.0 14 36.69374510225138 38.0 36.0 40.0 31.0 41.0 15 36.77754312288016 38.0 36.0 40.0 31.0 41.0 16 36.549295178043565 38.0 35.0 40.0 30.0 41.0 17 36.661991050168076 38.0 36.0 40.0 31.0 41.0 18 36.64960560831929 38.0 36.0 40.0 31.0 41.0 19 36.70496113570281 38.0 35.0 40.0 30.0 41.0 20 36.63214617453685 38.0 35.0 40.0 30.0 41.0 21 36.54966279284376 38.0 35.0 40.0 30.0 41.0 22 36.425251657292236 38.0 35.0 40.0 30.0 41.0 23 36.18399498954643 38.0 34.0 40.0 29.0 41.0 24 36.00594688798187 38.0 34.0 40.0 29.0 41.0 25 35.841800072010145 38.0 34.0 40.0 27.0 41.0 26 35.92062092106418 38.0 34.0 40.0 29.0 41.0 27 35.79173940800402 38.0 34.0 40.0 29.0 41.0 28 35.662998587027886 38.0 34.0 40.0 27.0 41.0 29 35.55830098423946 38.0 34.0 40.0 27.0 41.0 30 35.246005403786285 38.0 34.0 40.0 27.0 41.0 31 34.954586713221126 37.0 33.0 40.0 26.0 41.0 32 34.773989513144876 37.0 33.0 40.0 25.0 41.0 33 34.54286418826719 37.0 33.0 40.0 25.0 41.0 34 34.32994260368099 37.0 33.0 40.0 24.0 41.0 35 34.09409577348877 37.0 33.0 40.0 24.0 41.0 36 33.9612310103507 37.0 33.0 40.0 23.0 41.0 37 33.711865637546936 36.0 32.0 40.0 22.0 41.0 38 33.52629882998647 36.0 32.0 40.0 21.0 41.0 39 33.341061816773525 36.0 31.0 40.0 20.0 41.0 40 33.103674937747535 36.0 31.0 40.0 18.0 41.0 41 32.874995839750206 36.0 31.0 40.0 16.0 41.0 42 32.572004090660165 36.0 31.0 39.0 15.0 41.0 43 32.17344157042622 36.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 5.0 14 2.0 15 3.0 16 25.0 17 65.0 18 118.0 19 280.0 20 599.0 21 1102.0 22 1939.0 23 3103.0 24 4851.0 25 6928.0 26 9575.0 27 13130.0 28 16896.0 29 21067.0 30 25926.0 31 31044.0 32 36835.0 33 44339.0 34 52394.0 35 62478.0 36 79432.0 37 97415.0 38 102887.0 39 48578.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.76311688940392 25.05483965640875 17.04356008459679 20.13848336959054 2 21.862944730703248 26.036507326578096 31.729695711765793 20.370852230952863 3 22.171710906510867 24.70855559152701 33.56413894931757 19.555594552644557 4 16.856727048280078 19.06438251303293 33.121639652777986 30.957250785909007 5 11.659440438838278 41.12369103413221 33.99589723729157 13.220971289737948 6 31.677503487045737 38.095483027693646 12.500567306790437 17.72644617847018 7 23.868790259871894 35.65621511063239 20.817738700005144 19.657255929490574 8 27.478828110580956 35.962106932035134 18.173030083900894 18.38603487348302 9 23.951843973991632 14.809279021146171 22.57714615940867 38.661730845453526 10 16.958085861504525 29.941695990124323 32.21712570610785 20.883092442263298 11 32.84660932077493 22.71239209824846 23.26003225328206 21.180966327694556 12 19.863301755776696 29.534899200929477 30.895679088920424 19.706119954373406 13 32.689276237560854 21.532091410521346 27.06492107627931 18.713711275638484 14 19.211579714924557 24.680417174721413 29.119328066709226 26.9886750436448 15 22.009536805351747 30.913530342592786 26.603208989770323 20.47372386228514 16 20.318962569854378 29.17152029142928 28.538859758735768 21.970657379980576 17 20.84996172570187 28.207855156743083 28.30891140634597 22.633271711209073 18 22.053862375911095 25.632584891788117 31.160876103222606 21.15267662907818 19 21.780042298394296 25.05847041986754 33.303480389338866 19.8580068923993 20 22.547494924495247 24.429591932443596 33.39288793951148 19.630025203549675 21 21.55206060954467 25.282821345258373 34.27107885110542 18.89403919409154 22 19.4560511211495 25.827587145887097 33.634484991331554 21.08187674163185 23 20.979307673921134 25.888704997443334 34.512827184736274 18.619160143899258 24 20.577805748103685 25.832276882021365 32.38353569796889 21.206381671906062 25 20.488549479741852 26.803808670868268 32.915593826491865 19.792048022898015 26 20.469639253394007 27.577766414832876 32.59381741495693 19.358776916816183 27 19.238205313622323 27.351146262280302 32.44586380401139 20.96478462008599 28 19.830171039215273 27.12422354610616 32.67626600183354 20.369339412845036 29 20.030922002123997 26.060561134492556 31.924092838621643 21.984424024761807 30 20.47084950788027 26.814549679433842 33.70180539712988 19.012795415556006 31 21.203507317501188 26.787016389871383 33.04115772944156 18.968318563185875 32 20.79519771019851 26.46569382376879 32.34011781827424 20.39899064775846 33 20.452544408775555 26.659485823381512 32.62150198633017 20.266467781512755 34 19.39644608770109 27.19714137890345 33.500751870599586 19.905660662795867 35 18.659098541945905 29.116302430493572 32.58126102466196 19.64333800289856 36 21.508491448039237 26.320614567228123 32.15222580928205 20.018668175450593 37 20.417900874106305 27.4494794392891 31.986572226474923 20.14604746012968 38 20.447854672641288 25.61775927433141 33.50438263405838 20.430003418968923 39 19.610661131769483 25.65709254513493 34.26911218756524 20.463134135530346 40 18.284978623880136 26.30034280458323 33.31966754309262 22.095011028444006 41 20.119573143242693 25.30233669884935 33.40741099334662 21.170679164561328 42 19.099631174945312 27.52254855389717 32.172951417359286 21.20486885379823 43 19.25272836745747 27.573833087752526 31.418509026985646 21.754929517804356 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 72.0 1 82.0 2 92.0 3 156.0 4 220.0 5 220.0 6 476.0 7 732.0 8 957.0 9 1182.0 10 2002.5 11 2823.0 12 2823.0 13 6257.0 14 9691.0 15 16526.0 16 23361.0 17 20923.5 18 18486.0 19 18486.0 20 21461.5 21 24437.0 22 19190.5 23 13944.0 24 14870.5 25 15797.0 26 15797.0 27 16547.5 28 17298.0 29 17837.5 30 18377.0 31 19735.0 32 21093.0 33 21093.0 34 23329.5 35 25566.0 36 27871.0 37 30176.0 38 31274.0 39 32372.0 40 32372.0 41 33357.0 42 34342.0 43 35835.0 44 37328.0 45 40485.0 46 43642.0 47 43642.0 48 59554.5 49 75467.0 50 67627.0 51 59787.0 52 51978.0 53 44169.0 54 44169.0 55 38065.0 56 31961.0 57 27064.0 58 22167.0 59 19604.0 60 17041.0 61 17041.0 62 14852.0 63 12663.0 64 10985.5 65 9308.0 66 7693.0 67 6078.0 68 6078.0 69 5161.5 70 4245.0 71 3554.0 72 2863.0 73 2358.5 74 1854.0 75 1854.0 76 1435.0 77 1016.0 78 813.5 79 611.0 80 479.5 81 348.0 82 348.0 83 260.5 84 173.0 85 139.0 86 105.0 87 81.0 88 57.0 89 57.0 90 53.0 91 49.0 92 32.0 93 15.0 94 12.5 95 10.0 96 10.0 97 5.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 661018.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.626467663310926 #Duplication Level Percentage of deduplicated Percentage of total 1 82.622010857726 44.30726593539568 2 10.153286782249346 10.889698106092336 3 2.953762041479939 4.751994738076176 4 1.244434619120909 2.6693853144556834 5 0.6808613005683993 1.8256093259065547 6 0.41534062723184406 1.3363950429304658 7 0.2999177615537854 1.125847109913167 8 0.22226997315694094 0.9535642822420545 9 0.15696749461542903 0.7575851046766714 >10 1.0928881641149504 11.292391213309049 >50 0.09269537361603614 3.481769359767887 >100 0.05369547787760122 5.680796490613528 >500 0.007347802235880957 2.592306690106053 >1k 0.0036739011179404784 3.6436268601888178 >5k 2.8260777830311373E-4 1.0555636420104448 >10k+ 5.652155566062275E-4 3.636200784315377 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12140 1.8365611829027346 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11853 1.7931433032080821 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6965 1.0536778121019397 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4018 0.6078503157251391 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2681 0.40558653470858586 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2637 0.3989301350341443 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2454 0.37124556366089884 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1765 0.2670123960315755 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1664 0.25173293314251655 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1564 0.23660475206424028 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1459 0.22072016193205027 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1418 0.214517607689957 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1211 0.1832022728579252 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1127 0.17049460075217315 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1041 0.1574843650248556 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1003 0.15173565621511065 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 938 0.1419023385142311 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 898 0.13585106608292058 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 882 0.1334305571103964 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 785 0.11875622146446844 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 760 0.11497417619489939 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 758 0.11467161257333386 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 745 0.11270494903315796 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 723 0.10937674919593718 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 715 0.10816649470967508 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 685 0.10362804038619221 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 677 0.1024177858999301 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.5128181078276234E-4 0.0 0.0 0.0 0.0 7 1.5128181078276234E-4 0.0 0.0 0.0 0.0 8 3.025636215655247E-4 0.0 0.0 0.0 0.0 9 3.025636215655247E-4 0.0 0.0 0.0 0.0 10 3.025636215655247E-4 0.0 0.0 3.025636215655247E-4 0.0 11 3.025636215655247E-4 0.0 0.0 3.025636215655247E-4 0.0 12 3.025636215655247E-4 0.0 0.0 0.0010589726754793363 0.0 13 3.025636215655247E-4 0.0 0.0 0.0012102544862620987 0.0 14 3.025636215655247E-4 0.0 0.0 0.0013615362970448611 0.0 15 3.025636215655247E-4 0.0 0.0 0.0018153817293931481 0.0 16 3.025636215655247E-4 0.0 0.0 0.0024205089725241975 0.0 17 3.025636215655247E-4 0.0 0.0 0.003933327080351821 0.0 18 3.025636215655247E-4 0.0 0.0 0.004689736134265632 0.0 19 3.025636215655247E-4 0.0 0.0 0.005748708809744969 0.0 20 3.025636215655247E-4 0.0 0.0 0.009379472268531265 0.0 21 3.025636215655247E-4 0.0 0.0 0.013312799348883086 0.0 22 3.025636215655247E-4 0.0 0.0 0.023297398860545403 0.0 23 3.025636215655247E-4 0.0 0.0 0.0269281623193317 0.0 24 3.025636215655247E-4 0.0 0.0 0.034340971047687054 0.0 25 3.025636215655247E-4 0.0 0.0 0.0397871162358665 0.0 26 3.025636215655247E-4 0.0 0.0 0.04886402488283224 0.0 27 3.025636215655247E-4 0.0 0.0 0.1084690583312406 0.0 28 3.025636215655247E-4 0.0 0.0 0.21360991682526043 0.0 29 3.025636215655247E-4 0.0 0.0 0.3464353466925258 0.0 30 3.025636215655247E-4 0.0 0.0 0.5668529450030105 0.0 31 3.025636215655247E-4 0.0 0.0 0.8290243230895377 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGTCCG 20 0.0018413704 37.0 10 GGTATCA 2580 0.0 31.120155 1 GTATTGG 115 1.3460522E-10 20.913044 1 GTATCAA 3995 0.0 20.051313 2 TATACCG 65 6.8964604E-5 19.923077 5 GGACCCT 225 0.0 19.733334 6 TTGGACT 100 2.870329E-7 18.5 4 ATTGGAC 135 1.1496013E-9 17.814814 3 TAATAGT 75 2.0655918E-4 17.266666 4 TTGGACC 225 0.0 17.266666 4 CTAATAC 75 2.0655918E-4 17.266666 3 GACCCTC 255 0.0 16.686274 7 CGACCGC 90 4.4413588E-5 16.444445 10 CTAAACG 80 3.3798462E-4 16.1875 26 CGCCGGA 80 3.3798462E-4 16.1875 14 TAGTACA 80 3.3798462E-4 16.1875 4 TAAGCCG 70 0.0025909308 15.857143 10 GCGTCGG 70 0.0025909308 15.857143 11 CCGACCG 105 9.33101E-6 15.857142 9 CTAGGCA 95 7.0524235E-5 15.578948 4 >>END_MODULE