##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088084_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3577641 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.592766294885372 31.0 31.0 34.0 30.0 34.0 2 31.79113639406525 31.0 31.0 34.0 30.0 34.0 3 31.855690942718958 31.0 31.0 34.0 30.0 34.0 4 35.55543303534368 37.0 35.0 37.0 33.0 37.0 5 35.4561944588627 37.0 35.0 37.0 33.0 37.0 6 35.491171137629514 37.0 35.0 37.0 33.0 37.0 7 35.35431363851208 37.0 35.0 37.0 33.0 37.0 8 35.39545695054367 37.0 35.0 37.0 33.0 37.0 9 36.94145360029137 39.0 37.0 39.0 33.0 39.0 10 36.793103612128775 39.0 37.0 39.0 32.0 39.0 11 36.83117534710721 39.0 37.0 39.0 32.0 39.0 12 36.715599748549394 39.0 35.0 39.0 32.0 39.0 13 36.74964424882206 39.0 35.0 39.0 32.0 39.0 14 37.73316411568405 39.0 37.0 41.0 32.0 41.0 15 37.73443646246228 39.0 37.0 41.0 32.0 41.0 16 37.6053746029856 39.0 36.0 41.0 32.0 41.0 17 37.64364255664557 39.0 37.0 41.0 32.0 41.0 18 37.634484566785765 39.0 37.0 41.0 32.0 41.0 19 37.67603457138377 39.0 37.0 41.0 32.0 41.0 20 37.597942610787385 39.0 37.0 41.0 32.0 41.0 21 37.514807103339884 39.0 36.0 41.0 32.0 41.0 22 37.41287932467232 39.0 36.0 41.0 32.0 41.0 23 37.219774426780106 39.0 36.0 41.0 31.0 41.0 24 37.07456170141163 39.0 36.0 41.0 31.0 41.0 25 36.91804152512787 39.0 36.0 40.0 30.0 41.0 26 37.084463756984 39.0 36.0 41.0 31.0 41.0 27 37.022456137997075 39.0 36.0 41.0 31.0 41.0 28 36.93880967933898 39.0 35.0 41.0 31.0 41.0 29 36.85462879031183 39.0 35.0 40.0 30.0 41.0 30 36.62351420950285 39.0 35.0 40.0 30.0 41.0 31 36.40532350786454 38.0 35.0 40.0 30.0 41.0 32 36.26095463463215 38.0 35.0 40.0 30.0 41.0 33 36.083555896189694 38.0 35.0 40.0 30.0 41.0 34 35.95376143106589 38.0 35.0 40.0 29.0 41.0 35 35.74427534791781 38.0 35.0 40.0 28.0 41.0 36 35.63324520263492 38.0 35.0 40.0 27.0 41.0 37 35.45507332904559 38.0 34.0 40.0 27.0 41.0 38 35.349674827630835 38.0 34.0 40.0 26.0 41.0 39 35.23873776044047 38.0 34.0 40.0 25.0 41.0 40 35.03517177939318 38.0 34.0 40.0 24.0 41.0 41 34.870253052220725 38.0 34.0 40.0 24.0 41.0 42 34.63742309527423 38.0 33.0 40.0 23.0 41.0 43 34.30082783599584 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 6.0 14 8.0 15 15.0 16 44.0 17 104.0 18 231.0 19 518.0 20 1202.0 21 2359.0 22 4477.0 23 8075.0 24 13308.0 25 20378.0 26 30262.0 27 42727.0 28 59049.0 29 77140.0 30 97589.0 31 122072.0 32 150976.0 33 186867.0 34 228935.0 35 281019.0 36 361363.0 37 497196.0 38 658607.0 39 733111.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.16470629669103 22.079521114611556 14.714807885978498 23.040964702718913 2 18.761273140597392 23.457104835281125 35.54895530322914 22.23266672089234 3 19.200724723358213 24.651579071237165 33.46761175869798 22.68008444670664 4 13.56620186318303 16.621902532981927 36.30003681196632 33.51185879186872 5 11.94823628195227 38.93613137819026 35.383371333233264 13.732261006624197 6 31.72143320137487 37.797056775679835 13.10204126126685 17.379468761678435 7 25.14000147024254 34.031279270334835 21.403628815747584 19.425090443675035 8 26.574102879523124 35.14002662648376 18.86117136962596 19.424699124367145 9 24.08626242823134 14.768502485296874 22.40180051603836 38.74343457043342 10 16.3466932540185 27.97452287694601 33.594119700663086 22.0846641683724 11 32.48897807242258 22.59964037755605 23.89669617493762 21.01468537508375 12 20.990507432131956 27.761281805524924 30.751352637114792 20.49685812522833 13 31.393619426879333 21.5065178423436 26.867508506303455 20.23235422447361 14 20.195458404015383 23.47745343929142 28.024527894218565 28.30256026247463 15 21.919834885613174 29.802319461343384 26.446029660326452 21.831815992716987 16 21.372854347319926 28.854683854528723 27.13377334394368 22.638688454207674 17 21.24782782844897 27.125583589857115 27.068982047108697 24.55760653458522 18 22.80539047936895 25.617942102072288 30.27260141529013 21.304066003268634 19 22.583093161108117 24.61320182768478 31.347499651306542 21.456205359900558 20 23.51367842665041 24.153904765738094 31.517360182310078 20.81505662530142 21 22.275264622694117 25.12513133654271 32.199625395616835 20.39997864514634 22 20.443918213146596 25.488387459781457 31.644678714270103 22.423015612801844 23 21.926738876259524 25.656487053899486 32.84728680155443 19.56948726828656 24 21.83939081646258 25.600724052525116 29.943641634250056 22.61624349676225 25 21.492961423463115 26.17339190824345 31.22241722967732 21.111229438616117 26 21.36119862222062 26.930622720390335 31.010685532729525 20.697493124659516 27 20.077699243719536 27.079296106009522 30.46043468307748 22.382569967193465 28 20.663336539356518 26.332407304142592 30.958584162021847 22.045671994479044 29 21.08987458495696 26.070139513718676 30.02514785580778 22.814838045516588 30 21.241538768143588 26.30786599326204 31.86585797736553 20.584737261228838 31 22.254384942480254 25.90969859748365 31.625615873700013 20.21030058633608 32 21.552386055504172 26.02670307054285 30.482069050527986 21.93884182342499 33 21.147845745282996 25.9264973763438 31.392864739642683 21.53279213873052 34 20.057378591088373 26.581509994993908 32.266596900024346 21.094514513893373 35 19.710222462231396 28.70257244927593 30.668979922803878 20.918225165688785 36 22.325073980312727 26.045262786288507 30.472761241276025 21.15690199212274 37 21.196145728428313 27.027641957367997 30.49160047081303 21.284611843390657 38 21.064438829944088 25.32828196009605 31.950382947869837 21.65689626209002 39 20.525620094358267 25.153194521194273 32.69154171701409 21.629643667433374 40 19.128330651398507 25.895722907916134 32.16574832410519 22.81019811658017 41 20.927672731836424 24.808414259563776 32.3370343754446 21.9268786331552 42 19.498015591838307 27.32244515310508 31.37366214217693 21.80587711287969 43 20.01232096792272 27.271881108249822 30.383652244593573 22.332145679233886 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 184.0 1 411.5 2 639.0 3 1139.0 4 1639.0 5 1639.0 6 3070.0 7 4501.0 8 5156.5 9 5812.0 10 9809.5 11 13807.0 12 13807.0 13 27478.0 14 41149.0 15 64808.5 16 88468.0 17 83064.5 18 77661.0 19 77661.0 20 84880.5 21 92100.0 22 73593.0 23 55086.0 24 61824.5 25 68563.0 26 68563.0 27 75385.5 28 82208.0 29 87260.5 30 92313.0 31 100855.5 32 109398.0 33 109398.0 34 123797.0 35 138196.0 36 152015.5 37 165835.0 38 175375.0 39 184915.0 40 184915.0 41 191269.5 42 197624.0 43 208146.0 44 218668.0 45 234986.0 46 251304.0 47 251304.0 48 333648.0 49 415992.0 50 375785.0 51 335578.0 52 299445.0 53 263312.0 54 263312.0 55 228479.0 56 193646.0 57 161853.5 58 130061.0 59 116348.0 60 102635.0 61 102635.0 62 91054.0 63 79473.0 64 68838.0 65 58203.0 66 48920.0 67 39637.0 68 39637.0 69 33232.5 70 26828.0 71 22096.5 72 17365.0 73 14077.0 74 10789.0 75 10789.0 76 8678.5 77 6568.0 78 5027.0 79 3486.0 80 2699.0 81 1912.0 82 1912.0 83 1435.0 84 958.0 85 739.5 86 521.0 87 418.0 88 315.0 89 315.0 90 244.0 91 173.0 92 122.5 93 72.0 94 50.5 95 29.0 96 29.0 97 19.5 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3577641.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.80363546334606 #Duplication Level Percentage of deduplicated Percentage of total 1 72.25107649430377 28.036044341192945 2 13.83231872321835 10.734885066971625 3 5.4513501928088575 6.345966169943885 4 2.6917418311403223 4.177974751080347 5 1.5306533423220474 2.9697457158108485 6 0.9291928567443141 2.16336365329509 7 0.6160016984252564 1.673217374534698 8 0.42983706289735585 1.3343392557843476 9 0.30433570513635166 1.0628398584532228 >10 1.650905978626744 11.985731036701932 >50 0.17216970438342988 4.670853109406422 >100 0.1207083331791681 9.231271236892324 >500 0.011550521210008134 2.977519361065183 >1k 0.006858121967959182 5.338900740175158 >5k 5.775260604597206E-4 1.2933435149661685 >10k+ 7.219075755746507E-4 6.004004813725987 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 44684 1.2489794252693325 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 44297 1.238162241544079 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 35274 0.9859569476087735 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17562 0.4908821203692601 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 13066 0.3652127197782002 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 13035 0.3643462270250145 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12765 0.3567993546585585 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 11586 0.32384467865836736 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 11425 0.31934450661762875 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10638 0.2973467712383663 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 7047 0.1969733687645015 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6333 0.17701608406209568 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6098 0.17044750996536545 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 5796 0.16200619346658873 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5376 0.1502666142298794 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5368 0.15004300319679922 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5120 0.14311106117131372 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 5032 0.14065133980743177 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4916 0.1374089798277692 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4742 0.13254543985827533 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4384 0.12253884612793739 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4119 0.11513173065715648 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4114 0.11499197376148138 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3869 0.10814388587340093 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3857 0.10780846932378067 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 2.7951379135022213E-5 0.0 0.0 0.0 0.0 6 2.7951379135022213E-5 0.0 0.0 2.7951379135022213E-5 0.0 7 2.7951379135022213E-5 0.0 0.0 5.5902758270044425E-5 0.0 8 5.5902758270044425E-5 0.0 0.0 5.5902758270044425E-5 0.0 9 5.5902758270044425E-5 0.0 0.0 1.3975689567511106E-4 0.0 10 5.5902758270044425E-5 0.0 0.0 3.6336792875528873E-4 0.0 11 5.5902758270044425E-5 0.0 0.0 7.267358575105775E-4 0.0 12 5.5902758270044425E-5 0.0 0.0 0.0011460065445359107 0.0 13 5.5902758270044425E-5 0.0 0.0 0.0014814230941561772 0.0 14 8.385413740506664E-5 0.0 0.0 0.002012499297721599 0.0 15 8.385413740506664E-5 0.0 0.0 0.002543575501287021 0.0 16 8.385413740506664E-5 0.0 0.0 0.003074651704852443 0.0 17 8.385413740506664E-5 0.0 0.0 0.004695831694683732 0.0 18 8.385413740506664E-5 0.0 0.0 0.005674129964409509 0.0 19 8.385413740506664E-5 0.0 0.0 0.007407115470780886 0.0 20 1.1180551654008885E-4 0.0 0.0 0.012466315094219907 0.0 21 1.1180551654008885E-4 0.0 0.0 0.020152944356351014 0.0 22 1.1180551654008885E-4 0.0 0.0 0.0325913080714359 0.0 23 1.1180551654008885E-4 0.0 0.0 0.03818158389844034 0.0 24 1.1180551654008885E-4 0.0 0.0 0.04729373349645758 0.0 25 1.1180551654008885E-4 0.0 0.0 0.0526044955321118 0.0 26 1.1180551654008885E-4 0.0 0.0 0.06163279099272398 0.0 27 1.1180551654008885E-4 0.0 0.0 0.1162777372016924 0.0 28 1.1180551654008885E-4 0.0 0.0 0.2330585992278152 0.0 29 1.1180551654008885E-4 0.0 0.0 0.3730391059360064 0.0 30 1.3975689567511106E-4 0.0 0.0 0.6150700978661637 0.0 31 1.3975689567511106E-4 0.0 0.0 0.9308368279545097 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11025 0.0 30.120182 1 GCCGTAT 60 3.7291193E-5 21.583334 30 TGCGACG 160 0.0 20.8125 22 GTATTGG 1310 0.0 20.335876 1 GTCTAAC 215 0.0 18.069767 1 GTATCAA 18650 0.0 17.80563 2 ATTGGAC 1530 0.0 17.29085 3 TTAACGG 400 0.0 16.65 35 GGACCCT 2120 0.0 16.40566 6 CTAATAC 840 0.0 16.297619 3 GTATGCG 80 3.385064E-4 16.1875 33 TTGGACC 2335 0.0 16.16274 4 CAATGCG 210 0.0 15.857142 19 TCTAACG 155 7.223207E-9 15.516129 2 TGGACCC 2415 0.0 14.861284 5 CCATGCG 125 2.9627936E-6 14.799999 9 TAATACT 905 0.0 14.718232 4 GACCCTC 2270 0.0 14.588105 7 CTAGTAC 460 0.0 14.47826 3 GTATTAG 735 0.0 14.346938 1 >>END_MODULE