##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088083_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3228168 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50747637669415 31.0 31.0 34.0 30.0 34.0 2 31.69774125758015 31.0 31.0 34.0 30.0 34.0 3 31.74541783451171 31.0 31.0 34.0 30.0 34.0 4 35.45095050815199 37.0 35.0 37.0 33.0 37.0 5 35.36632696935228 37.0 35.0 37.0 33.0 37.0 6 35.419065240718574 37.0 35.0 37.0 33.0 37.0 7 35.24804347233477 37.0 35.0 37.0 32.0 37.0 8 35.320255947026304 37.0 35.0 37.0 32.0 37.0 9 36.815815967446554 39.0 37.0 39.0 32.0 39.0 10 36.69075896917385 39.0 35.0 39.0 32.0 39.0 11 36.73236213233017 39.0 35.0 39.0 32.0 39.0 12 36.599792823669645 39.0 35.0 39.0 32.0 39.0 13 36.640817020675506 39.0 35.0 39.0 32.0 39.0 14 37.542636256849086 39.0 36.0 41.0 32.0 41.0 15 37.54720819982108 39.0 36.0 41.0 32.0 41.0 16 37.407397632341315 39.0 36.0 41.0 32.0 41.0 17 37.506263924306296 39.0 36.0 41.0 32.0 41.0 18 37.50607744082712 39.0 36.0 41.0 32.0 41.0 19 37.568217019684226 39.0 37.0 41.0 32.0 41.0 20 37.4997605453 39.0 36.0 41.0 32.0 41.0 21 37.42169304695419 39.0 36.0 41.0 32.0 41.0 22 37.31280961833461 39.0 36.0 41.0 31.0 41.0 23 37.09772570696445 39.0 36.0 41.0 31.0 41.0 24 36.93927484567098 39.0 36.0 40.0 31.0 41.0 25 36.77834517906131 39.0 35.0 40.0 30.0 41.0 26 36.91254792191732 39.0 36.0 40.0 31.0 41.0 27 36.84266772980836 39.0 35.0 40.0 31.0 41.0 28 36.73372234654454 39.0 35.0 40.0 30.0 41.0 29 36.614897675709564 39.0 35.0 40.0 30.0 41.0 30 36.344192433603205 38.0 35.0 40.0 30.0 41.0 31 36.064502219215356 38.0 35.0 40.0 30.0 41.0 32 35.91128497649441 38.0 35.0 40.0 29.0 41.0 33 35.68939132040216 38.0 34.0 40.0 29.0 41.0 34 35.5287069941837 38.0 34.0 40.0 27.0 41.0 35 35.279005615568956 38.0 34.0 40.0 26.0 41.0 36 35.129494499666684 38.0 34.0 40.0 25.0 41.0 37 34.92079780234486 38.0 33.0 40.0 25.0 41.0 38 34.763169388953735 38.0 33.0 40.0 24.0 41.0 39 34.59972653220031 38.0 33.0 40.0 23.0 41.0 40 34.3331722512583 38.0 33.0 40.0 22.0 41.0 41 34.11352878784499 38.0 33.0 40.0 21.0 41.0 42 33.807303089554196 38.0 33.0 40.0 18.0 41.0 43 33.44087916118368 37.0 32.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 2.0 14 5.0 15 22.0 16 53.0 17 96.0 18 242.0 19 587.0 20 1272.0 21 2731.0 22 4908.0 23 8665.0 24 14325.0 25 22123.0 26 32381.0 27 45264.0 28 60976.0 29 78857.0 30 98280.0 31 119934.0 32 144909.0 33 178909.0 34 216943.0 35 260524.0 36 335209.0 37 459704.0 38 562298.0 39 578946.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.250941091046066 22.23976571231733 15.70900275326439 21.800290443372216 2 18.89638333568761 24.192607076211647 35.48672188064562 21.424287707455125 3 19.65396472550375 24.280861466937285 34.789267473068314 21.275906334490646 4 13.546475895926111 16.439478986223765 35.67236897212289 34.341676145727234 5 11.407120075535103 39.50999452320944 34.875694201788754 14.207191199466696 6 31.439844518624803 37.3853529308264 12.133228506075271 19.04157404447352 7 24.159771114762304 35.34131433060485 20.36040255649644 20.138511998136405 8 27.36576906778086 34.681063686896096 18.185856498174815 19.76731074714823 9 23.420156571776936 14.773487625179357 23.03318786382865 38.77316793921506 10 16.63318018145276 28.200050307171125 32.604065215936714 22.562704295439396 11 31.720158306506974 22.29530805088211 24.424317445684363 21.560216196926554 12 21.310972663132773 28.196425960482852 30.830024955330703 19.662576421053675 13 32.99053828673105 21.23430379088077 27.248365016938397 18.526792905449778 14 19.739988749036605 24.12609876561567 28.75287159776071 27.381040887587016 15 21.308866205228476 30.000204450326006 27.283555254869015 21.407374089576503 16 20.400951871154167 29.20548125128556 27.875407971332343 22.518158906227928 17 20.888565898676898 26.682316409802713 27.30062375935825 25.128493932162144 18 23.423966782397944 24.49612287836321 31.294282081973428 20.785628257265422 19 22.291157089717757 23.588982977341946 33.10072462151908 21.019135311421213 20 23.816480431006067 22.701296834613316 33.213451096721116 20.2687716376595 21 22.217957677543424 24.082854423933327 34.318845859323304 19.380342039199945 22 19.59647081564528 24.395105830923296 33.66277715410103 22.345646199330393 23 21.623440911377596 24.693107669737138 35.200894129425734 18.482557289459535 24 21.302515854193462 24.47347845589201 31.732859008577 22.491146681337526 25 20.821902701470307 25.707955719776663 32.99976952872341 20.470372050029614 26 20.732223353927058 26.545768373888844 32.779118063248255 19.942890208935843 27 18.661296438103594 26.82224097382788 32.30339932742039 22.213063260648145 28 19.889578237563843 25.8445966876569 32.27833867382366 21.98748640095559 29 20.066458746880585 25.39316417237269 31.325321358739693 23.215055722007033 30 20.608097224184117 25.831493280399286 33.89758525578594 19.662824239630652 31 21.970603760399086 25.37079854580059 33.421990429246556 19.236607264553765 32 21.323363591981582 25.40533825996664 31.903698940079945 21.36759920797183 33 20.527834982565963 25.28861571021087 32.98288688816691 21.200662419056258 34 18.910261175998276 26.59892545865023 33.975431266278584 20.51538209907291 35 18.47809655507396 29.534863117409003 32.01060167872304 19.97643864879399 36 21.94151605492651 25.854416498769584 31.843881731062325 20.360185715241585 37 20.822584202556992 27.446186196009627 31.45570490755128 20.2755246938821 38 20.541465004299653 24.888853368226187 33.46740318347744 21.10227844399672 39 19.905407649168197 24.629480250098506 34.44495453768205 21.020157563051242 40 17.91139742417371 25.45474708875127 33.814937760364394 22.81891772671063 41 20.54651430780554 24.515421750045228 33.624582115924575 21.313481826224656 42 18.8002916824651 27.5028437181708 32.607875426557726 21.08898917280637 43 19.28443624991017 27.963972135279203 30.882624448293893 21.868967166516736 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 237.0 1 378.5 2 520.0 3 1061.5 4 1603.0 5 1603.0 6 3112.5 7 4622.0 8 5657.5 9 6693.0 10 11194.5 11 15696.0 12 15696.0 13 31904.5 14 48113.0 15 79630.0 16 111147.0 17 102521.0 18 93895.0 19 93895.0 20 100850.5 21 107806.0 22 82359.5 23 56913.0 24 61457.0 25 66001.0 26 66001.0 27 69242.0 28 72483.0 29 74648.0 30 76813.0 31 82202.0 32 87591.0 33 87591.0 34 95944.5 35 104298.0 36 114725.5 37 125153.0 38 130261.0 39 135369.0 40 135369.0 41 141920.5 42 148472.0 43 157196.0 44 165920.0 45 192080.5 46 218241.0 47 218241.0 48 328459.5 49 438678.0 50 389537.0 51 340396.0 52 298249.5 53 256103.0 54 256103.0 55 215457.5 56 174812.0 57 140077.0 58 105342.0 59 91909.0 60 78476.0 61 78476.0 62 68240.5 63 58005.0 64 50821.5 65 43638.0 66 37130.0 67 30622.0 68 30622.0 69 25642.0 70 20662.0 71 17340.0 72 14018.0 73 11430.0 74 8842.0 75 8842.0 76 6913.5 77 4985.0 78 3900.5 79 2816.0 80 2173.5 81 1531.0 82 1531.0 83 1192.5 84 854.0 85 633.5 86 413.0 87 315.5 88 218.0 89 218.0 90 158.0 91 98.0 92 69.5 93 41.0 94 30.0 95 19.0 96 19.0 97 14.0 98 9.0 99 6.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3228168.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.145861735790206 #Duplication Level Percentage of deduplicated Percentage of total 1 72.26746693499032 26.121698678279508 2 13.384448118850662 9.675848222276667 3 5.517994752038076 5.9835802609795286 4 2.8495833510530666 4.120025832470955 5 1.569712830840078 2.8369311474220655 6 0.9668601772513356 2.0968796570861032 7 0.6489003504245257 1.6418543642725503 8 0.4495383774517226 1.299916162904115 9 0.31510448837386984 1.0250750942179931 >10 1.7041372822168692 11.503084254533583 >50 0.17836491457614836 4.521328356049833 >100 0.12656259894185012 8.653233477706737 >500 0.011178858826190205 2.7721031641066793 >1k 0.008083174843548334 6.44748812190135 >5k 0.0012038771043582626 2.8144372132781355 >10k+ 8.599122173987589E-4 8.486515992514272 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 57318 1.7755581493899946 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 55901 1.7316632839430908 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 44569 1.3806282696563499 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21063 0.6524753358561264 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 17809 0.5516751296710704 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 16833 0.5214412632799781 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 16479 0.5104752912487827 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 14876 0.4608186438871831 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 14287 0.4425730011573127 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 13899 0.43055380017396866 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 9205 0.2851462501332025 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 7744 0.23988838251292993 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 7589 0.23508689758401669 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 7523 0.2330423943239633 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6934 0.214796751594093 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6812 0.21101751829520643 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 6401 0.19828583890305584 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 6088 0.1885899370788633 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5797 0.17957553634135523 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 5711 0.17691148663886144 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5371 0.1663791971173743 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5338 0.16535694548734764 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 5019 0.15547517973042294 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 5016 0.15538224776405687 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 4962 0.15370947236946778 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4751 0.14717325740172135 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4725 0.1463678470265488 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3992 0.12366146991110748 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3979 0.12325876472352121 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 3888 0.12043982841041731 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 3824 0.11845727979460798 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 3768 0.11672254975577478 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3717 0.11514270632755172 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3592 0.11127054106229912 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 3481 0.10783205830675478 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3464 0.10730544383068044 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3428 0.10619026023428767 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 3410 0.1056326684360913 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3303 0.10231809496903507 No Hit TTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCC 3253 0.10076922886293402 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3246 0.10055238760807987 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3231 0.10008772777624955 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 3.097732212202091E-5 0.0 0.0 0.0 0.0 6 3.097732212202091E-5 0.0 0.0 0.0 0.0 7 3.097732212202091E-5 0.0 0.0 3.097732212202091E-5 0.0 8 3.097732212202091E-5 0.0 0.0 6.195464424404182E-5 0.0 9 3.097732212202091E-5 0.0 0.0 1.5488661061010455E-4 0.0 10 3.097732212202091E-5 0.0 0.0 5.266144760743555E-4 0.0 11 3.097732212202091E-5 0.0 0.0 9.293196636606273E-4 0.0 12 3.097732212202091E-5 0.0 0.0 0.0016108207503450873 0.0 13 3.097732212202091E-5 0.0 0.0 0.0018896166494432756 0.0 14 3.097732212202091E-5 0.0 0.0 0.002416231125517631 0.0 15 3.097732212202091E-5 0.0 0.0 0.0032526188228121956 0.0 16 3.097732212202091E-5 0.0 0.0 0.00477050760679122 0.0 17 6.195464424404182E-5 0.0 0.0 0.0067220789004785375 0.0 18 6.195464424404182E-5 0.0 0.0 0.008116058395969478 0.0 19 9.293196636606273E-5 0.0 0.0 0.010408380232999026 0.0 20 9.293196636606273E-5 0.0 0.0 0.018245642729870316 0.0 21 9.293196636606273E-5 0.0 0.0 0.03131807266536314 0.0 22 9.293196636606273E-5 0.0 0.0 0.050152284515551857 0.0 23 9.293196636606273E-5 0.0 0.0 0.061118256546747254 0.0 24 1.2390928848808364E-4 0.0 0.0 0.07493414221316859 0.0 25 1.2390928848808364E-4 0.0 0.0 0.08128449324818288 0.0 26 1.5488661061010455E-4 0.0 0.0 0.09299392101030678 0.0 27 1.8586393273212546E-4 0.0 0.0 0.16417980724671083 0.0 28 1.8586393273212546E-4 0.0 0.0 0.30466196307007565 0.0 29 1.8586393273212546E-4 0.0 0.0 0.477019783357 0.0 30 2.1684125485414636E-4 0.0 0.0 0.7805665628306829 0.0 31 2.478185769761673E-4 0.0 0.0 1.1385404972727566 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13710 0.0 30.442013 1 ATTGGAC 1385 0.0 21.906137 3 GTATTGG 1410 0.0 21.648935 1 TTGGACC 2305 0.0 18.62039 4 TGCGACG 180 0.0 18.5 22 GTATCAA 23425 0.0 17.832657 2 TTTTTAC 2715 0.0 17.64825 1 TATTGGA 1735 0.0 17.59366 2 TGGACCC 2470 0.0 17.076923 5 GGACCCT 2475 0.0 16.967676 6 CGACGAG 210 0.0 16.738094 24 TATACTG 320 0.0 15.609375 5 GACCCTC 2645 0.0 15.31758 7 CTAATAC 305 0.0 15.163935 3 CAATGCG 260 0.0 14.942307 19 CGCCCTT 175 2.242814E-9 14.8 10 GATACCT 1395 0.0 14.587814 36 ACGGGTA 165 1.6481863E-8 14.575757 5 GTATTAG 385 0.0 14.415584 1 TTAGACG 155 1.2122109E-7 14.322581 15 >>END_MODULE