##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088082_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2191492 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35419111728448 31.0 31.0 34.0 30.0 34.0 2 31.55511815694513 31.0 31.0 34.0 30.0 34.0 3 31.616166520343217 31.0 31.0 34.0 30.0 34.0 4 35.33956181450811 37.0 35.0 37.0 33.0 37.0 5 35.22286597441378 37.0 35.0 37.0 33.0 37.0 6 35.278100034131995 37.0 35.0 37.0 32.0 37.0 7 35.12229841587375 37.0 35.0 37.0 32.0 37.0 8 35.176756748370515 37.0 35.0 37.0 32.0 37.0 9 36.66676036234675 39.0 35.0 39.0 32.0 39.0 10 36.487770888508834 38.0 35.0 39.0 32.0 39.0 11 36.55709899922062 38.0 35.0 39.0 32.0 39.0 12 36.42094700779195 38.0 35.0 39.0 32.0 39.0 13 36.46965446371696 38.0 35.0 39.0 32.0 39.0 14 37.38034727026154 39.0 36.0 41.0 32.0 41.0 15 37.38942190982217 39.0 36.0 41.0 32.0 41.0 16 37.24523977272105 39.0 36.0 40.0 32.0 41.0 17 37.297992874261006 39.0 36.0 40.0 32.0 41.0 18 37.29351190878178 39.0 36.0 40.0 32.0 41.0 19 37.340792026619305 39.0 36.0 40.0 31.0 41.0 20 37.267451580932075 39.0 36.0 40.0 31.0 41.0 21 37.188559666200014 39.0 36.0 40.0 31.0 41.0 22 37.072577495149424 39.0 36.0 40.0 31.0 41.0 23 36.874606888822775 39.0 36.0 40.0 31.0 41.0 24 36.728316598919825 39.0 35.0 40.0 30.0 41.0 25 36.578756390623376 38.0 35.0 40.0 30.0 41.0 26 36.71568730344441 39.0 35.0 40.0 30.0 41.0 27 36.62640338180564 39.0 35.0 40.0 30.0 41.0 28 36.541423377315546 39.0 35.0 40.0 30.0 41.0 29 36.450279079275674 39.0 35.0 40.0 30.0 41.0 30 36.20541393717157 38.0 35.0 40.0 30.0 41.0 31 35.96962024045719 38.0 35.0 40.0 29.0 41.0 32 35.82346638728318 38.0 35.0 40.0 29.0 41.0 33 35.627936583843336 38.0 34.0 40.0 27.0 41.0 34 35.49528768528473 38.0 34.0 40.0 27.0 41.0 35 35.26524988455354 38.0 34.0 40.0 26.0 41.0 36 35.156358772927305 38.0 34.0 40.0 25.0 41.0 37 34.96778815528416 38.0 33.0 40.0 25.0 41.0 38 34.84943317155618 38.0 33.0 40.0 24.0 41.0 39 34.73352537905682 38.0 33.0 40.0 24.0 41.0 40 34.52091543113094 38.0 33.0 40.0 23.0 41.0 41 34.3534194968542 38.0 33.0 40.0 22.0 41.0 42 34.114455357354714 38.0 33.0 40.0 21.0 41.0 43 33.77490495059987 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 6.0 14 7.0 15 12.0 16 38.0 17 78.0 18 195.0 19 467.0 20 1000.0 21 2072.0 22 3640.0 23 6406.0 24 10537.0 25 15631.0 26 22835.0 27 31511.0 28 41980.0 29 54422.0 30 68517.0 31 84289.0 32 102340.0 33 123459.0 34 150464.0 35 181425.0 36 230991.0 37 309894.0 38 400600.0 39 348674.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.20548192738098 23.17402938272191 15.427708611302254 22.192780078594858 2 19.034201356883802 24.413869637671503 35.11844898361481 21.433480021829876 3 19.68991901407808 25.2390608772471 33.671854608641056 21.399165500033767 4 13.968839493824298 17.29419956814809 36.25237965732934 32.484581280698265 5 11.751126629711631 39.53042037114441 35.208935282446845 13.509517716697117 6 31.36707777167336 38.49728860520595 13.107234705853363 17.028398917267324 7 24.557607328705743 34.47610121323738 21.553763372168365 19.412528085888518 8 26.412234222164628 35.65607357909589 18.88060736703579 19.051084831703697 9 23.871955726965922 14.698707547187032 22.552169937193472 38.877166788653575 10 16.074710745008424 28.59430926510341 33.68718662901804 21.643793360870127 11 32.43566483473359 22.85328899215694 23.830203350046453 20.88084282306301 12 20.545683032381593 28.18185053835469 31.241364330784688 20.03110209847903 13 31.464454353472426 21.686823406154346 27.083968364931287 19.764753875441937 14 19.908126518371958 23.62002690404528 28.524493815172498 27.947352762410265 15 21.739207809109047 30.20882576801558 26.639796084128985 21.41217033874639 16 20.81823707319032 29.215758031514603 27.47607565987008 22.489929235425 17 20.934002953239165 27.311302071830518 27.76656268879832 23.988132286132004 18 22.571836903808 25.60908276188095 30.798241563282 21.02083877102905 19 22.13017432872217 24.660459632068015 32.16055545719537 21.048810582014447 20 23.23658950158157 24.319641595771284 32.09717398010123 20.34659492254592 21 21.987668675039654 25.232216225293087 32.78323626095829 19.99687883870897 22 20.127474797991503 25.548986717724727 32.43885900564547 21.884679478638297 23 21.531084758694078 25.792930113365685 33.45104613660465 19.224938991335584 24 21.477012008257386 25.620764301215793 30.776612463107327 22.12561122741949 25 21.234756960098416 26.258092660160294 31.685445349560936 20.82170503018035 26 21.050179512405247 27.058734414727503 31.579216351234685 20.31186972163257 27 19.671940394945544 27.08743632192132 31.329112768835117 21.911510514298023 28 20.424258906717434 26.541917561186622 31.429044687363678 21.604778844732266 29 20.683716846787487 26.077530741613476 30.76931150102305 22.46944091057599 30 21.108404685027367 26.309518811841432 32.356768813210365 20.22530768992084 31 21.8874173394199 26.17408596517806 32.089416707886684 19.849079987515356 32 21.20304340604483 25.999410447311693 31.23666433644294 21.560881810200538 33 20.751296377080088 26.00662014736992 32.00956243508988 21.232521040460107 34 19.821792641725363 26.702949406157995 32.77826248053837 20.696995471578266 35 19.547824039512808 28.79426436418659 31.19792360638323 20.459987989917373 36 21.958966767845833 26.21091019269064 31.06500046543633 20.765122574027192 37 21.000715494284258 27.189923577179382 31.01453256502876 20.7948283635076 38 20.867974877389468 25.419622795793916 32.39477944706164 21.31762287975498 39 20.272444526377463 25.27196083763938 33.198113431397424 21.257481204585734 40 18.853228759219746 25.991698806110175 32.676140273384526 22.478932161285552 41 20.705984781144533 25.050148483316388 32.61960344824439 21.624263287294685 42 19.36379416397596 27.375961217289408 31.759823900794526 21.500420717940106 43 19.924873100152773 27.41346990999739 30.565340872793513 22.096316117056325 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 135.0 1 247.0 2 359.0 3 652.0 4 945.0 5 945.0 6 1841.5 7 2738.0 8 3191.0 9 3644.0 10 6036.0 11 8428.0 12 8428.0 13 17093.0 14 25758.0 15 42424.0 16 59090.0 17 55196.0 18 51302.0 19 51302.0 20 56302.5 21 61303.0 22 49631.0 23 37959.0 24 42020.0 25 46081.0 26 46081.0 27 50520.0 28 54959.0 29 58162.5 30 61366.0 31 67542.0 32 73718.0 33 73718.0 34 82083.5 35 90449.0 36 98321.0 37 106193.0 38 110839.0 39 115485.0 40 115485.0 41 119377.5 42 123270.0 43 127540.0 44 131810.0 45 141028.5 46 150247.0 47 150247.0 48 198712.0 49 247177.0 50 222460.0 51 197743.0 52 176248.0 53 154753.0 54 154753.0 55 133415.5 56 112078.0 57 94067.5 58 76057.0 59 67434.0 60 58811.0 61 58811.0 62 51919.5 63 45028.0 64 38647.5 65 32267.0 66 27127.5 67 21988.0 68 21988.0 69 18714.0 70 15440.0 71 12865.5 72 10291.0 73 8259.5 74 6228.0 75 6228.0 76 5012.5 77 3797.0 78 2944.5 79 2092.0 80 1623.0 81 1154.0 82 1154.0 83 886.0 84 618.0 85 461.5 86 305.0 87 255.5 88 206.0 89 206.0 90 175.5 91 145.0 92 95.0 93 45.0 94 35.0 95 25.0 96 25.0 97 14.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2191492.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.91643406169309 #Duplication Level Percentage of deduplicated Percentage of total 1 76.94528617138909 35.330531588466926 2 12.616533161608166 11.586124260042912 3 4.443581374495808 6.121002335394129 4 1.9364848482588677 3.556659153861842 5 1.0463733745443906 2.40228670280894 6 0.6302812698922514 1.7364161021596651 7 0.3998072323612536 1.2850405695472455 8 0.28179441672486844 1.035119580360055 9 0.21133910915125068 0.8733544443000327 >10 1.2578794210525597 11.095123804558058 >50 0.1296840425348407 4.154095752101424 >100 0.08774175838863288 7.751645813695379 >500 0.0066565858125343215 2.122191599724197 >1k 0.00556371351495406 4.6581923138314165 >5k 5.961121623165064E-4 2.0301782623070928 >10k+ 3.9740810821100426E-4 4.262037716840769 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30176 1.3769614490949544 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 29078 1.3268585967915922 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23097 1.0539395078786506 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11076 0.50540910028419 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 8559 0.3905558404958813 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 8126 0.37079761185530224 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7535 0.343829683156498 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6950 0.31713554053585413 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6669 0.3043132258753397 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6664 0.30408507081020597 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3847 0.17554250711387492 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3569 0.16285708549244077 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3377 0.15409593099130636 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3313 0.1511755461575949 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3221 0.1469774929591347 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3114 0.14209497456527334 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3111 0.14195808152619313 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3005 0.1371211941453585 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2784 0.1270367402664486 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2773 0.12653479912315446 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2481 0.1132105433193459 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2432 0.11097462368103556 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2420 0.11042705152471467 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2399 0.1094688002511531 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2359 0.10764355973008344 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2320 0.10586395022204051 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2249 0.10262414829714185 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.56310130267416E-5 0.0 5 0.0 0.0 0.0 4.56310130267416E-5 0.0 6 0.0 0.0 0.0 4.56310130267416E-5 0.0 7 0.0 0.0 0.0 1.825240521069664E-4 0.0 8 0.0 0.0 0.0 1.825240521069664E-4 0.0 9 0.0 0.0 0.0 1.825240521069664E-4 0.0 10 0.0 0.0 0.0 4.1067911724067437E-4 0.0 11 0.0 0.0 0.0 7.300962084278656E-4 0.0 12 0.0 0.0 0.0 0.00114077532566854 0.0 13 4.56310130267416E-5 0.0 0.0 0.0014145614038289895 0.0 14 9.12620260534832E-5 0.0 0.0 0.0018708715340964056 0.0 15 9.12620260534832E-5 0.0 0.0 0.002372812677390563 0.0 16 1.368930390802248E-4 0.0 0.0 0.0032398019248986534 0.0 17 1.368930390802248E-4 0.0 0.0 0.004517470289647418 0.0 18 1.368930390802248E-4 0.0 0.0 0.005247566498075284 0.0 19 1.368930390802248E-4 0.0 0.0 0.006935913980064723 0.0 20 1.368930390802248E-4 0.0 0.0 0.011362122243658658 0.0 21 1.368930390802248E-4 0.0 0.0 0.01907376344517799 0.0 22 1.368930390802248E-4 0.0 0.0 0.029705789480408782 0.0 23 1.368930390802248E-4 0.0 0.0 0.03499898699151081 0.0 24 1.368930390802248E-4 0.0 0.0 0.04407955858383238 0.0 25 1.368930390802248E-4 0.0 0.0 0.04896207697769374 0.0 26 1.368930390802248E-4 0.0 0.0 0.05653682514013284 0.0 27 1.368930390802248E-4 0.0 0.0 0.10486006793545219 0.0 28 1.368930390802248E-4 0.0 0.0 0.2083055744670754 0.0 29 1.368930390802248E-4 0.0 0.0 0.3295015450661011 0.0 30 1.368930390802248E-4 0.0 0.0 0.5365750821814544 0.0 31 1.368930390802248E-4 0.0 0.0 0.8125514489671877 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6930 0.0 31.527416 1 TAAGCCG 125 4.129106E-10 19.24 36 GTATTGG 660 0.0 19.060608 1 GTATCAA 11675 0.0 18.729765 2 ATTGGAC 740 0.0 17.25 3 TTGGACC 1195 0.0 17.1841 4 TACTAGG 185 1.8189894E-12 17.0 2 TCACGTT 150 4.6766218E-9 16.033333 24 GGACCCT 1220 0.0 15.467214 6 TGGACCC 1225 0.0 15.404081 5 GTACGAT 80 0.0063010245 13.875 6 TTTGGAC 730 0.0 13.431507 3 GACCCTC 1355 0.0 13.3800745 7 TCTATAC 250 1.0913936E-11 13.32 3 TTTTTAC 1565 0.0 13.239616 1 TATCAAC 18670 0.0 13.178896 1 GCGATTG 85 0.00940829 13.058823 9 TATTGGA 995 0.0 13.015076 2 CGTACTT 100 0.0018334024 12.949999 5 ATCAACG 19085 0.0 12.902018 2 >>END_MODULE