##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088080_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1685095 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.298830629727107 31.0 31.0 33.0 30.0 34.0 2 31.52344645257389 31.0 31.0 34.0 30.0 34.0 3 31.58053937611826 31.0 31.0 34.0 30.0 34.0 4 35.32491165186533 37.0 35.0 37.0 33.0 37.0 5 35.1782350549969 37.0 35.0 37.0 32.0 37.0 6 35.23583062082553 37.0 35.0 37.0 32.0 37.0 7 35.11299540975435 37.0 35.0 37.0 32.0 37.0 8 35.14242995202051 37.0 35.0 37.0 32.0 37.0 9 36.65960494808898 39.0 35.0 39.0 32.0 39.0 10 36.42427222204089 38.0 35.0 39.0 32.0 39.0 11 36.510152246609245 38.0 35.0 39.0 32.0 39.0 12 36.353158130550504 38.0 35.0 39.0 32.0 39.0 13 36.39551954044134 38.0 35.0 39.0 32.0 39.0 14 37.35356285550666 39.0 36.0 40.0 32.0 41.0 15 37.35593008109335 39.0 36.0 40.0 32.0 41.0 16 37.21592017067287 39.0 36.0 40.0 32.0 41.0 17 37.19093166854094 39.0 36.0 40.0 31.0 41.0 18 37.15852103293879 39.0 36.0 40.0 31.0 41.0 19 37.19173340375468 39.0 36.0 40.0 31.0 41.0 20 37.095070604327944 39.0 36.0 40.0 31.0 41.0 21 36.99311908230693 39.0 36.0 40.0 31.0 41.0 22 36.8613716140633 39.0 36.0 40.0 31.0 41.0 23 36.649702242306816 39.0 35.0 40.0 30.0 41.0 24 36.51258712416807 38.0 35.0 40.0 30.0 41.0 25 36.33782665072296 38.0 35.0 40.0 30.0 41.0 26 36.52077894718102 38.0 35.0 40.0 30.0 41.0 27 36.44694394084606 38.0 35.0 40.0 30.0 41.0 28 36.37413558286031 38.0 35.0 40.0 30.0 41.0 29 36.2898584352811 38.0 35.0 40.0 30.0 41.0 30 36.062775689204464 38.0 35.0 40.0 29.0 41.0 31 35.89593108993855 38.0 35.0 40.0 29.0 41.0 32 35.74605111284527 38.0 34.0 40.0 27.0 41.0 33 35.58764461350844 38.0 34.0 40.0 27.0 41.0 34 35.45501766962693 38.0 34.0 40.0 27.0 41.0 35 35.255275815310114 38.0 34.0 40.0 26.0 41.0 36 35.18650046436551 38.0 34.0 40.0 26.0 41.0 37 35.019273097362465 38.0 33.0 40.0 25.0 41.0 38 34.94985030517567 38.0 33.0 40.0 25.0 41.0 39 34.885821274171484 38.0 33.0 40.0 24.0 41.0 40 34.72051724086773 38.0 33.0 40.0 24.0 41.0 41 34.59360451487898 38.0 33.0 40.0 24.0 41.0 42 34.416002658603816 38.0 33.0 40.0 23.0 41.0 43 34.09164231096763 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 7.0 15 10.0 16 41.0 17 75.0 18 193.0 19 418.0 20 886.0 21 1585.0 22 3064.0 23 5229.0 24 8005.0 25 12251.0 26 17550.0 27 24209.0 28 31812.0 29 41566.0 30 52177.0 31 64754.0 32 78643.0 33 96293.0 34 116966.0 35 144034.0 36 183775.0 37 241842.0 38 325102.0 39 234602.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.07221848026373 23.15003011699637 14.564638788911012 23.213112613828894 2 19.699542162311324 23.97674908536314 34.16038858343298 22.163320168892557 3 19.82819959705536 25.59244434290055 32.19029194199734 22.389064118046758 4 14.61223254475267 17.74534966871304 36.65128672270703 30.99113106382726 5 12.236402101958642 39.20123197801904 35.69009462374525 12.872271296277066 6 31.755301629878435 39.11856601556589 13.802189194081047 15.323943160474633 7 25.904830291467245 33.17195766410796 22.243137627255436 18.680074417169358 8 26.23507873443337 35.95791335206621 19.14538942908263 18.66161848441779 9 24.737240333631043 14.542444194540959 21.364196083900314 39.356119387927684 10 15.94978324664188 28.17734311715363 34.32305003575466 21.549823600449827 11 33.80141772422326 22.836516635560606 23.110091715897322 20.251973924318804 12 20.503947848637612 27.563312454193976 30.84876520314878 21.083974494019625 13 30.268619870096348 21.802272275450346 26.299585483311027 21.62952237114228 14 20.49403742815687 22.582703052350166 27.34160388583433 29.581655633658638 15 22.669285707927447 29.918313210827876 25.225758785113005 22.186642296131673 16 22.17637581263964 28.70882650533056 26.165053008880808 22.94974467314899 17 21.81853248629899 27.562719015841836 26.984769404692315 23.633979093166854 18 22.47345105172112 26.60716458122539 29.19954067871544 21.71984368833805 19 22.7629302798952 25.536957856975423 29.88941276307864 21.81069910005074 20 23.257086395722496 25.532032318652657 29.864488352288742 21.3463929333361 21 22.315715137722204 26.24890584803824 30.12542319572487 21.309955818514684 22 21.575044730415794 26.464917408217342 29.72675131075696 22.233286550609908 23 22.281770463979775 26.581824763588997 30.4954320082844 20.640972764146827 24 22.381290075633718 26.79688682240467 28.156216711817432 22.665606390144173 25 22.30170999261169 26.727751254380316 29.327842050448194 21.642696702559796 26 22.13323284443904 27.33881472557927 29.121384847738558 21.406567582243138 27 21.58234402214712 27.220305086656836 28.6650307549426 22.532320136253446 28 21.59765473163234 26.80519495933464 29.585453639112337 22.011696669920685 29 22.23880552728481 26.590845026541533 28.8370685332281 22.33328091294556 30 22.031220791706104 26.618677285256915 29.850720582519084 21.499381340517893 31 22.548046252585166 26.675291304051107 29.794225251395325 20.982437191968405 32 21.90725151994398 26.375545592384995 29.186307003462712 22.530895884208306 33 21.784706500226992 26.503787620282537 29.73838270245891 21.97312317703156 34 21.33399007177637 26.748462252870013 30.420540088244287 21.497007587109334 35 21.057981894195876 28.12488316682442 29.225058527857477 21.59207641112222 36 22.70536675973758 26.52503271328916 28.962343369364934 21.807257157608326 37 21.851527658678 26.714814298303658 29.346357327034973 22.08730071598337 38 21.744234004611016 25.606983582527988 30.341909506585687 22.306872906275313 39 21.329954690981815 25.836881600147173 30.8183811595192 22.014782549351818 40 20.505550132188393 26.32071188864723 30.45626507704313 22.717472902121244 41 21.50033084188132 25.25810117530466 30.704619027413884 22.536948955400142 42 20.467095326969694 27.097225972422923 29.994866758253984 22.4408119423534 43 21.046943940846067 26.442010687824723 29.557977443408234 22.953067927920976 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 97.0 1 138.0 2 179.0 3 296.5 4 414.0 5 414.0 6 895.0 7 1376.0 8 1514.5 9 1653.0 10 2861.5 11 4070.0 12 4070.0 13 8273.5 14 12477.0 15 20278.5 16 28080.0 17 26308.5 18 24537.0 19 24537.0 20 27973.0 21 31409.0 22 26668.0 23 21927.0 24 25746.5 25 29566.0 26 29566.0 27 33261.0 28 36956.0 29 41217.0 30 45478.0 31 52229.0 32 58980.0 33 58980.0 34 67569.5 35 76159.0 36 84331.0 37 92503.0 38 99283.0 39 106063.0 40 106063.0 41 108993.5 42 111924.0 43 116288.5 44 120653.0 45 123164.5 46 125676.0 47 125676.0 48 144539.0 49 163402.0 50 150268.5 51 137135.0 52 125785.0 53 114435.0 54 114435.0 55 101846.0 56 89257.0 57 77561.0 58 65865.0 59 59764.5 60 53664.0 61 53664.0 62 47687.0 63 41710.0 64 36058.5 65 30407.0 66 25515.0 67 20623.0 68 20623.0 69 17622.0 70 14621.0 71 12189.5 72 9758.0 73 7878.5 74 5999.0 75 5999.0 76 4756.5 77 3514.0 78 2803.5 79 2093.0 80 1609.0 81 1125.0 82 1125.0 83 860.5 84 596.0 85 461.0 86 326.0 87 264.5 88 203.0 89 203.0 90 158.0 91 113.0 92 85.0 93 57.0 94 33.0 95 9.0 96 9.0 97 6.0 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1685095.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.095548188652195 #Duplication Level Percentage of deduplicated Percentage of total 1 79.64157356351248 40.693298598345415 2 11.523313738340708 11.775800648206909 3 3.7004380647511326 5.672277343698432 4 1.6181794874963566 3.3072707192503445 5 0.8568956282616894 2.1891775933245277 6 0.5096359350006188 1.5624076485295761 7 0.3450854847583459 1.2342632410972127 8 0.2401227573393546 0.9815363135060025 9 0.18896844864964113 0.8689901826701328 >10 1.1646181939749292 11.479494940699954 >50 0.11785163173014086 4.150353504535166 >100 0.08201673567194767 8.121580362926217 >500 0.007572386426050987 2.570010045267724 >1k 0.0032619510758373485 2.827814642975993 >5k 1.1649825270847674E-4 0.31090127310789395 >10k+ 3.494947581254302E-4 2.254822941858515 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14090 0.8361546381658008 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13690 0.8124171040801854 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10100 0.5993727356617876 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5223 0.30995285132292244 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3635 0.2157148410030295 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3559 0.2112047095267626 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3241 0.19233336992869837 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3156 0.18728914393550514 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3064 0.18182951109581358 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2705 0.1605250742539738 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.934383521403838E-5 0.0 5 0.0 5.934383521403838E-5 0.0 5.934383521403838E-5 0.0 6 0.0 5.934383521403838E-5 0.0 5.934383521403838E-5 0.0 7 0.0 5.934383521403838E-5 0.0 1.1868767042807675E-4 0.0 8 5.934383521403838E-5 5.934383521403838E-5 0.0 1.1868767042807675E-4 0.0 9 5.934383521403838E-5 1.1868767042807675E-4 0.0 2.373753408561535E-4 0.0 10 5.934383521403838E-5 1.1868767042807675E-4 0.0 2.373753408561535E-4 0.0 11 5.934383521403838E-5 1.7803150564211514E-4 0.0 3.560630112842303E-4 0.0 12 5.934383521403838E-5 1.7803150564211514E-4 0.0 5.340945169263454E-4 0.0 13 5.934383521403838E-5 1.7803150564211514E-4 0.0 6.527821873544222E-4 0.0 14 5.934383521403838E-5 2.373753408561535E-4 0.0 7.714698577824989E-4 0.0 15 5.934383521403838E-5 2.373753408561535E-4 0.0 9.49501363424614E-4 0.0 16 5.934383521403838E-5 2.373753408561535E-4 0.0 0.0011275328690667293 0.0 17 5.934383521403838E-5 2.373753408561535E-4 0.0 0.001720971221207113 0.0 18 5.934383521403838E-5 2.373753408561535E-4 0.0 0.0022550657381334585 0.0 19 5.934383521403838E-5 2.373753408561535E-4 0.0 0.002670472584631727 0.0 20 5.934383521403838E-5 2.373753408561535E-4 0.0 0.005044225993193262 0.0 21 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.009613701304674217 0.0 22 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.016319554683860555 0.0 23 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.02053296698405728 0.0 24 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.026111287494176887 0.0 25 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.02961257377180515 0.0 26 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.03614039564534937 0.0 27 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.07180604060898643 0.0 28 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.14473961408703961 0.0 29 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.23310258472074274 0.0 30 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.36484589889590796 0.0 31 1.1868767042807675E-4 2.373753408561535E-4 0.0 0.5712437577703334 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3590 0.0 30.043177 1 GTATTGG 490 0.0 19.255104 1 GTATCAA 5700 0.0 18.954386 2 TCTAACG 50 0.0070362105 18.5 2 GGGTAAG 215 0.0 16.348839 1 TATACCG 140 3.475907E-8 15.857142 5 TAATACT 685 0.0 15.124087 4 GGACCCT 785 0.0 15.082803 6 CGCCTAC 75 0.0041054618 14.8 7 CTAGTAC 125 2.9605435E-6 14.799999 3 TTGGACC 870 0.0 14.459769 4 TCTAATA 585 0.0 14.23077 2 CTCTAAT 445 0.0 14.134832 1 GTCTAAC 105 1.6563539E-4 14.095238 1 GACCCTC 840 0.0 14.095238 7 TACCGCA 200 9.840733E-10 13.875001 7 TGGACCC 840 0.0 13.875 5 TATTGCG 120 3.3021537E-5 13.874999 9 CGAACTA 390 0.0 13.756411 24 TAGTACC 175 3.5683115E-8 13.742857 4 >>END_MODULE