##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088076_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5195864 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.614678713684576 31.0 31.0 34.0 30.0 34.0 2 31.81090267181743 31.0 31.0 34.0 30.0 34.0 3 31.880172383264842 31.0 31.0 34.0 30.0 34.0 4 35.57387626004068 37.0 35.0 37.0 33.0 37.0 5 35.47265401865792 37.0 35.0 37.0 33.0 37.0 6 35.508932489380015 37.0 35.0 37.0 33.0 37.0 7 35.36420910939932 37.0 35.0 37.0 33.0 37.0 8 35.405363188874844 37.0 35.0 37.0 33.0 37.0 9 36.95075794901483 39.0 37.0 39.0 33.0 39.0 10 36.80371945839999 39.0 37.0 39.0 32.0 39.0 11 36.85001435757364 39.0 37.0 39.0 32.0 39.0 12 36.72046593213371 39.0 35.0 39.0 32.0 39.0 13 36.75191941128559 39.0 35.0 39.0 32.0 39.0 14 37.72881949950961 39.0 37.0 41.0 32.0 41.0 15 37.73565416646779 39.0 37.0 41.0 32.0 41.0 16 37.62605911163187 39.0 36.0 41.0 32.0 41.0 17 37.64797442735222 39.0 37.0 41.0 32.0 41.0 18 37.63557648929995 39.0 36.0 41.0 32.0 41.0 19 37.67469683579093 39.0 37.0 41.0 32.0 41.0 20 37.595508465964464 39.0 37.0 41.0 32.0 41.0 21 37.50893518383083 39.0 36.0 41.0 32.0 41.0 22 37.39434403979781 39.0 36.0 41.0 32.0 41.0 23 37.17747577688716 39.0 36.0 41.0 31.0 41.0 24 37.02711541333645 39.0 36.0 41.0 31.0 41.0 25 36.87330884719076 39.0 36.0 40.0 30.0 41.0 26 37.04224879635033 39.0 36.0 41.0 31.0 41.0 27 36.967887727623356 39.0 36.0 41.0 31.0 41.0 28 36.89272871653299 39.0 35.0 41.0 30.0 41.0 29 36.79651776874837 39.0 35.0 40.0 30.0 41.0 30 36.55599607687961 39.0 35.0 40.0 30.0 41.0 31 36.33458881910689 38.0 35.0 40.0 30.0 41.0 32 36.17398068925591 38.0 35.0 40.0 30.0 41.0 33 35.988686770862365 38.0 35.0 40.0 29.0 41.0 34 35.849348443300286 38.0 35.0 40.0 29.0 41.0 35 35.64115611955971 38.0 34.0 40.0 27.0 41.0 36 35.53871386933915 38.0 34.0 40.0 27.0 41.0 37 35.34835438340957 38.0 34.0 40.0 26.0 41.0 38 35.242131241310396 38.0 34.0 40.0 25.0 41.0 39 35.12738497389462 38.0 34.0 40.0 25.0 41.0 40 34.929577256063666 38.0 34.0 40.0 24.0 41.0 41 34.762166407742775 38.0 33.0 40.0 23.0 41.0 42 34.522550243809306 38.0 33.0 40.0 22.0 41.0 43 34.17627847842053 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 11.0 14 5.0 15 29.0 16 66.0 17 157.0 18 380.0 19 880.0 20 1901.0 21 3951.0 22 7345.0 23 12520.0 24 20700.0 25 31509.0 26 45498.0 27 64052.0 28 86369.0 29 113594.0 30 143740.0 31 178203.0 32 218828.0 33 270408.0 34 332947.0 35 409762.0 36 527309.0 37 726144.0 38 949368.0 39 1050186.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.558933028270175 21.74375618761384 14.531365717039554 23.16594506707643 2 18.748238983930296 23.62248126586839 35.24224267609776 22.387037074103556 3 19.286378550323874 24.45933919748477 33.39706351051529 22.85721874167607 4 13.614578826543575 16.36984724773397 36.37335388301157 33.642220042710896 5 12.145487256787321 38.874266147073904 35.15448056377149 13.825766032367282 6 31.918926284444705 37.73857437377114 13.234334078028217 17.108165263755943 7 25.588872226062886 33.77061062414259 21.222456938826728 19.4180602109678 8 26.99974441209393 34.85104690961888 18.734016132831808 19.415192545455383 9 24.33237282577065 14.642569551474018 22.119362631508448 38.90569499124689 10 16.21430045128202 28.129989545530833 33.43080188396001 22.224908119227138 11 32.93775587659723 22.49979984079645 23.694095919369715 20.868348363236606 12 21.115294780617813 27.474083232355582 30.75661718628509 20.654004800741514 13 31.726504003953913 21.202652725321524 26.536337363718527 20.534505907006036 14 20.381326378057622 23.141887470495764 27.96187506062514 28.51491109082147 15 22.117919175713606 29.865716269709907 25.986284475498206 22.03008007907828 16 21.616443386508962 28.781892674635056 26.676083130736295 22.92558080811969 17 21.503757604125127 27.104135135176747 26.94019704903747 24.45191021166066 18 23.099642330900117 25.634677889952467 29.860519828848485 21.40515995029893 19 22.710178711375047 24.625490582509475 31.120829952439095 21.543500753676387 20 23.764132394535345 24.202981448321204 31.1036239593646 20.929262197778847 21 22.473933112952917 25.128140382427254 31.726850433344676 20.671076071275152 22 20.975876196913546 25.335901786497878 31.34639397797941 22.341828038609172 23 22.23460814216846 25.63729535646045 32.19227831983285 19.935818181538238 24 21.99922861722324 25.58252102056559 29.659898719443 22.758351642768172 25 21.85449811619396 26.09125258089896 30.798727603339888 21.255521699567197 26 21.65822662025026 26.773160344458592 30.576185211930106 20.992427823361044 27 20.390737709839982 26.85686153448204 30.259991408551105 22.49240934712687 28 20.99487207517364 26.20680602879521 30.505783061296448 22.292538834734703 29 21.297689854853783 26.02096590672889 29.78738473524326 22.893959503174063 30 21.500658985685536 26.363565328114824 31.404632607781878 20.73114307841776 31 22.47402934333924 25.983301333522203 31.116884506599863 20.42578481653869 32 21.894241265745215 25.892305880215496 30.17923486834913 22.03421798569016 33 21.42103796404217 25.89915748372167 30.897613948325052 21.78219060391111 34 20.476248031126296 26.49507377406337 31.6394732425637 21.389204952246633 35 20.003448897045804 28.735798319586504 30.2414381900681 21.019314593299594 36 22.412422650015472 26.131515374536363 30.134064325009273 21.321997650438888 37 21.595522900522415 26.868486165149818 30.13895282863447 21.397038105693298 38 21.32592385020085 25.326336486097407 31.52016680960087 21.827572854100875 39 20.807049607149068 25.174023030625897 32.31560718294397 21.703320179281057 40 19.449412070831723 25.709179455043476 31.916905446331928 22.924503027792873 41 21.126111076040484 24.787080647222485 31.94502396521541 22.141784311521626 42 19.744435189219733 26.98463624144127 31.209323415701412 22.061605153637586 43 20.16679035478989 27.021781170561816 30.218150436578018 22.59327803807028 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 425.0 1 660.5 2 896.0 3 1689.0 4 2482.0 5 2482.0 6 4513.5 7 6545.0 8 7510.0 9 8475.0 10 14051.5 11 19628.0 12 19628.0 13 38394.0 14 57160.0 15 93049.0 16 128938.0 17 119918.5 18 110899.0 19 110899.0 20 119429.5 21 127960.0 22 102809.0 23 77658.0 24 87981.5 25 98305.0 26 98305.0 27 107591.5 28 116878.0 29 124841.5 30 132805.0 31 146049.0 32 159293.0 33 159293.0 34 178593.0 35 197893.0 36 216792.0 37 235691.0 38 248781.5 39 261872.0 40 261872.0 41 273138.0 42 284404.0 43 298322.5 44 312241.0 45 335074.0 46 357907.0 47 357907.0 48 468573.0 49 579239.0 50 526546.0 51 473853.0 52 426759.5 53 379666.0 54 379666.0 55 332968.0 56 286270.0 57 244270.5 58 202271.0 59 183416.5 60 164562.0 61 164562.0 62 146116.5 63 127671.0 64 111883.0 65 96095.0 66 81425.0 67 66755.0 68 66755.0 69 56280.5 70 45806.0 71 37962.5 72 30119.0 73 24697.5 74 19276.0 75 19276.0 76 15392.0 77 11508.0 78 9035.5 79 6563.0 80 5038.0 81 3513.0 82 3513.0 83 2759.5 84 2006.0 85 1549.5 86 1093.0 87 844.0 88 595.0 89 595.0 90 507.5 91 420.0 92 269.5 93 119.0 94 92.0 95 65.0 96 65.0 97 50.0 98 35.0 99 22.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5195864.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.486812015807445 #Duplication Level Percentage of deduplicated Percentage of total 1 69.83086168074468 24.780746613664377 2 13.616792479342077 9.664331099453458 3 5.908978716192653 6.290724507208077 4 3.191764666802842 4.53062210918115 5 1.9093600936223993 3.3878551356431292 6 1.224451638752934 2.607113107612364 7 0.8423580701443781 2.0924821739648323 8 0.5613758343188585 1.5937150962152318 9 0.4312160016081452 1.3772233068548732 >10 2.1301732525288264 13.696721835011475 >50 0.18846876888134223 4.672634806024862 >100 0.14427764363575687 9.97056370618339 >500 0.012355469891680022 3.036937127786769 >1k 0.006150519707109684 4.478337527698502 >5k 8.708700470243646E-4 2.0370443194395755 >10k+ 5.442937793902279E-4 5.782947528057898 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 66905 1.2876587993835096 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 60899 1.1720668593327308 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 50999 0.9815306944138645 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24400 0.4696042852545794 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 18065 0.34768038578376953 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 17476 0.33634444627496024 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 16359 0.31484657797047805 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 15406 0.2965050663373791 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 14950 0.28772885510475255 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 13939 0.2682710709903108 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 9417 0.1812403096000973 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 8710 0.16763333297407323 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 8164 0.1571249747876388 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 7941 0.15283309955764815 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7514 0.144615024565693 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 7143 0.13747472990055168 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 6246 0.12021099859426652 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6131 0.11799769970884534 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 6019 0.11584213905521776 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 5897 0.11349411762894487 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5669 0.10910601201263158 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5611 0.10798973953128872 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5522 0.1062768386547454 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 5228 0.100618491938973 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.9246077264531943E-5 0.0 3 1.9246077264531943E-5 0.0 0.0 1.9246077264531943E-5 0.0 4 3.8492154529063885E-5 0.0 0.0 1.9246077264531943E-5 0.0 5 9.623038632265971E-5 0.0 0.0 1.9246077264531943E-5 0.0 6 1.1547646358719166E-4 0.0 0.0 1.9246077264531943E-5 0.0 7 1.1547646358719166E-4 0.0 0.0 1.9246077264531943E-5 0.0 8 1.347225408517236E-4 0.0 0.0 1.9246077264531943E-5 0.0 9 1.347225408517236E-4 0.0 0.0 7.698430905812777E-5 0.0 10 1.347225408517236E-4 0.0 0.0 7.698430905812777E-5 0.0 11 1.347225408517236E-4 0.0 0.0 3.656754680261069E-4 0.0 12 1.347225408517236E-4 0.0 0.0 5.773823179359583E-4 0.0 13 1.5396861811625554E-4 0.0 0.0 7.313509360522138E-4 0.0 14 1.9246077264531943E-4 0.0 0.0 8.468273996394055E-4 0.0 15 1.9246077264531943E-4 0.0 0.0 0.0012317489449300443 0.0 16 1.9246077264531943E-4 0.0 0.0 0.0017898851856014708 0.0 17 1.9246077264531943E-4 0.0 0.0 0.0026752047397699402 0.0 18 1.9246077264531943E-4 0.0 0.0 0.0034642939076157497 0.0 19 1.9246077264531943E-4 0.0 0.0 0.004349613461784219 0.0 20 1.9246077264531943E-4 0.0 0.0 0.0077369230603418415 0.0 21 1.9246077264531943E-4 0.0 0.0 0.014492296180192554 0.0 22 1.9246077264531943E-4 0.0 0.0 0.02297981625385114 0.0 23 1.9246077264531943E-4 0.0 0.0 0.02900383843764964 0.0 24 1.9246077264531943E-4 0.0 0.0 0.03610564094826193 0.0 25 1.9246077264531943E-4 0.0 0.0 0.04085942203260132 0.0 26 1.9246077264531943E-4 0.0 0.0 0.04921221956540818 0.0 27 1.9246077264531943E-4 0.0 0.0 0.1038133407648853 0.0 28 2.1170684990985138E-4 0.0 0.0 0.21197629499155482 0.0 29 2.1170684990985138E-4 0.0 0.0 0.3418680704498809 0.0 30 2.1170684990985138E-4 0.0 0.0 0.5550568683091013 0.0 31 2.1170684990985138E-4 0.0 0.0 0.8234241696857346 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 15475 0.0 28.930532 1 GTATTGG 1845 0.0 21.357723 1 ATTGGAC 1895 0.0 20.403694 3 TTGGACC 2960 0.0 17.312502 4 GTATCAA 26495 0.0 16.876581 2 GGACCCT 3020 0.0 16.846027 6 TATACCG 365 0.0 16.726028 5 CAATGCG 315 0.0 15.857142 19 TATTGGA 2420 0.0 15.747933 2 GTACTAG 490 0.0 15.479592 1 TAGGTCG 300 0.0 15.416666 21 TGGACCC 3295 0.0 15.383916 5 GACCCTC 3260 0.0 15.095092 7 ACGTTTA 360 0.0 14.388889 26 CGAACTA 555 0.0 14.333333 24 TGCGACG 310 0.0 14.32258 22 TTTTTAC 3245 0.0 14.138675 1 TAATACT 1050 0.0 14.095238 4 TAGTACT 1030 0.0 14.009708 4 ATGCGAC 440 0.0 13.875 21 >>END_MODULE