##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088075_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 936712 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.599140397475423 31.0 30.0 31.0 28.0 34.0 2 30.78684270085149 31.0 31.0 33.0 27.0 34.0 3 30.626102793601447 31.0 30.0 34.0 27.0 34.0 4 34.41922277071288 35.0 35.0 37.0 30.0 37.0 5 34.156672488448955 35.0 35.0 37.0 30.0 37.0 6 34.47219743101402 35.0 35.0 37.0 30.0 37.0 7 34.27597062917951 35.0 35.0 37.0 30.0 37.0 8 34.463614216536136 35.0 35.0 37.0 30.0 37.0 9 35.754050337777244 37.0 35.0 39.0 30.0 39.0 10 35.440496118337336 37.0 35.0 39.0 30.0 39.0 11 35.69411729539068 37.0 35.0 39.0 30.0 39.0 12 35.40893358897932 37.0 35.0 39.0 30.0 39.0 13 35.592927175054875 37.0 35.0 39.0 30.0 39.0 14 36.1332672155369 38.0 34.0 40.0 29.0 41.0 15 36.28774265729488 38.0 34.0 40.0 30.0 41.0 16 35.98877029439144 38.0 34.0 40.0 29.0 41.0 17 36.20041485536643 38.0 34.0 40.0 30.0 41.0 18 36.222049039619435 38.0 35.0 40.0 30.0 41.0 19 36.309921299182676 38.0 35.0 40.0 30.0 41.0 20 36.254150688792286 38.0 34.0 40.0 29.0 41.0 21 36.18054748951652 38.0 34.0 40.0 29.0 41.0 22 36.04479818770337 38.0 34.0 40.0 29.0 41.0 23 35.77942206355849 38.0 34.0 40.0 27.0 41.0 24 35.60658345361221 38.0 34.0 40.0 27.0 41.0 25 35.4383887470215 38.0 34.0 40.0 27.0 41.0 26 35.43130118969331 38.0 34.0 40.0 27.0 41.0 27 35.26258124161962 38.0 34.0 40.0 27.0 41.0 28 35.098262859875824 37.0 33.0 40.0 27.0 41.0 29 34.977186157538284 37.0 33.0 40.0 26.0 41.0 30 34.63044350878392 37.0 33.0 40.0 25.0 41.0 31 34.29539709110164 37.0 33.0 39.0 25.0 40.0 32 34.07472307390105 36.0 33.0 39.0 24.0 40.0 33 33.8077658874873 36.0 33.0 39.0 24.0 40.0 34 33.577413335155306 35.0 32.0 39.0 23.0 40.0 35 33.30069541118294 35.0 31.0 39.0 22.0 40.0 36 33.13245266421269 35.0 31.0 39.0 21.0 40.0 37 32.827096268650344 35.0 31.0 39.0 19.0 40.0 38 32.57645039243652 35.0 31.0 39.0 18.0 40.0 39 32.298564553459336 35.0 30.0 39.0 16.0 40.0 40 32.01393277763069 35.0 30.0 39.0 15.0 40.0 41 31.722747226468755 35.0 30.0 39.0 13.0 40.0 42 31.35877195979127 35.0 28.0 39.0 10.0 40.0 43 30.91785949149792 35.0 27.0 38.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 2.0 12 0.0 13 5.0 14 11.0 15 24.0 16 59.0 17 154.0 18 302.0 19 602.0 20 1242.0 21 2202.0 22 3676.0 23 5891.0 24 8962.0 25 12389.0 26 16918.0 27 22281.0 28 28394.0 29 35390.0 30 42397.0 31 50382.0 32 59334.0 33 69644.0 34 81893.0 35 97524.0 36 118722.0 37 129903.0 38 107074.0 39 41332.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.711804695573456 26.014185790296267 18.130439238527956 18.14357027560232 2 23.726182647387883 27.26846672189531 29.50512003689501 19.500230593821794 3 24.193455405717017 24.010581694266754 34.05625208174978 17.739710818266445 4 18.90869338708162 20.273573948022445 30.650509441535927 30.167223223360008 5 10.79734219269103 42.89621569916901 33.08327426145923 13.223167846680731 6 31.234680456746577 38.269073098241506 11.723347197431014 18.7728992475809 7 22.368454765178626 37.02835022931274 20.530002818368935 20.073192187139696 8 28.401152115057776 36.42400225469515 17.4800792559506 17.694766374296474 9 23.787674333199533 14.212479396014995 22.728330586135336 39.27151568465014 10 17.718679807667673 30.988286687904072 30.9672556773053 20.325777827122955 11 32.755852385792004 22.53862446515044 22.80444789860704 21.90107525045051 12 19.133202094133523 31.182156308449127 31.194860319927574 18.489781277489772 13 33.87978375423823 21.075421260750367 27.781965000982154 17.262829984029242 14 18.607320072765162 25.01868236982125 30.9582881397911 25.41570941762249 15 22.270238878118352 31.008463647311018 27.764883977145587 18.956413497425036 16 18.90954743827345 28.63356079563409 30.594248819274227 21.86264294681823 17 20.396770832443696 28.137997591575637 30.01488184201761 21.450349733963055 18 21.332170400293794 24.369283194834697 32.94897471154421 21.3495716933273 19 21.69813133599228 23.631703234291866 36.20088138082997 18.46928404888589 20 21.725033948534875 23.222505957007066 36.25180418314274 18.800655911315324 21 20.686294186473535 23.975885864598723 37.58273620920838 17.75508373971936 22 18.267087429220506 24.38412233429272 36.98853009249375 20.36026014399303 23 20.094329954137454 24.587386517947884 38.01050909991545 17.307774427999213 24 19.45902262381607 24.58268923639283 35.669448026714726 20.28884011307638 25 19.65940438469882 25.836329629597998 35.89790672052883 18.606359265174355 26 19.124875095013195 26.955990742085078 35.449102819222986 18.470031343678738 27 18.20431466662112 26.41580336325359 35.46148656150449 19.918395408620793 28 18.537608144232166 26.996344660898973 35.513903953402966 18.952143241465894 29 18.817523422353936 24.862818027312557 34.79970364423644 21.519954906097073 30 19.392299874454473 26.1285218936023 36.48218449213846 17.996993739804765 31 20.10500559403531 26.03948705685419 35.697738472444044 18.157768876666466 32 19.819966008762567 25.676301787529145 35.41942454030695 19.084307663401347 33 19.083667125007473 25.955256258060107 35.73414240449573 19.226934212436696 34 18.124781149382095 26.311715874249504 36.45869808436318 19.104804892005227 35 17.538902031787785 28.34190231362468 35.31629785889366 18.802897795693873 36 20.879950294220638 25.396279753008393 34.464381795044794 19.259388157726175 37 19.63570446412558 27.030720221370068 34.194821887623945 19.138753426880406 38 19.938785880825698 24.680584854256164 35.52041609374066 19.86021317117748 39 18.631019993338402 24.877870679568534 36.56566799613969 19.92544133095338 40 17.432679414804124 25.280128790919726 35.424335334659965 21.86285645961619 41 19.39934579678706 24.571586570899058 35.35974771327793 20.669319919035946 42 18.863962455909608 26.785500772916325 33.588445541425756 20.76209122974831 43 19.205155907045068 26.811869603464032 32.402808974369925 21.580165515120978 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 129.0 1 150.0 2 171.0 3 262.5 4 354.0 5 354.0 6 789.5 7 1225.0 8 1550.5 9 1876.0 10 3362.5 11 4849.0 12 4849.0 13 11173.0 14 17497.0 15 30460.0 16 43423.0 17 37514.5 18 31606.0 19 31606.0 20 38079.5 21 44553.0 22 33789.0 23 23025.0 24 23779.5 25 24534.0 26 24534.0 27 24482.5 28 24431.0 29 24804.0 30 25177.0 31 26585.5 32 27994.0 33 27994.0 34 30705.5 35 33417.0 36 36155.0 37 38893.0 38 40133.5 39 41374.0 40 41374.0 41 43435.5 42 45497.0 43 47655.5 44 49814.0 45 54883.0 46 59952.0 47 59952.0 48 86531.5 49 113111.0 50 99483.0 51 85855.0 52 73092.0 53 60329.0 54 60329.0 55 50808.5 56 41288.0 57 34634.0 58 27980.0 59 24525.0 60 21070.0 61 21070.0 62 18282.0 63 15494.0 64 13369.0 65 11244.0 66 9381.5 67 7519.0 68 7519.0 69 6316.0 70 5113.0 71 4072.0 72 3031.0 73 2563.5 74 2096.0 75 2096.0 76 1631.0 77 1166.0 78 940.0 79 714.0 80 566.5 81 419.0 82 419.0 83 327.5 84 236.0 85 173.5 86 111.0 87 92.5 88 74.0 89 74.0 90 59.0 91 44.0 92 31.0 93 18.0 94 11.0 95 4.0 96 4.0 97 3.0 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 936712.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.28178442878544 #Duplication Level Percentage of deduplicated Percentage of total 1 80.7330733865042 37.364706987475024 2 10.650637570220326 9.858610241081205 3 3.44788121361929 4.787222851943613 4 1.5109091144754787 2.797102797105649 5 0.8186830781081678 1.894505686824837 6 0.5151865164304532 1.4306250776430698 7 0.34094581029247983 1.1045706345697892 8 0.2519603115442706 0.9328938258801243 9 0.1929465410291588 0.80369191963722 >10 1.308592763590571 11.868316061917232 >50 0.13473267898154 4.378889008765544 >100 0.07963516968427738 7.226674873216683 >500 0.007407922759906394 2.446248194045843 >1k 0.006018937242423945 4.828318801010683 >5k 6.944927587412244E-4 2.0498257028944056 >10k+ 6.944927587412244E-4 6.227797335989082 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23643 2.5240415410499706 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22841 2.43842290906917 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11643 1.2429647533073134 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7604 0.8117756578329305 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5783 0.6173722552929823 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5745 0.6133155121317971 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3755 0.4008702781644732 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3253 0.3472785658772387 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2772 0.29592873796855385 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2754 0.29400712278693986 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2424 0.25877751112401676 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2238 0.23892082091400557 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2076 0.22162628427947972 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1865 0.19910068409500467 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1686 0.17999128867784336 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 1642 0.17529400712278695 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1553 0.16579268761369556 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1534 0.163764316033103 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1531 0.16344404683616737 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1457 0.1555440733117543 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1449 0.15469002211992586 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 1449 0.15469002211992586 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 1377 0.14700356139346993 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1303 0.13910358786905688 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1296 0.138356293076207 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1289 0.1376089982833571 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC 1115 0.11903338486108858 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1107 0.11817933366926013 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1082 0.11551042369479626 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 1030 0.10995909094791141 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTC 1018 0.10867801416016877 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC 1010 0.10782396296834032 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 978 0.10440775820102657 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 965 0.10301992501430535 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 958 0.10227263022145547 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.0675639897855478E-4 0.0 5 2.1351279795710955E-4 0.0 0.0 1.0675639897855478E-4 0.0 6 2.1351279795710955E-4 0.0 0.0 1.0675639897855478E-4 0.0 7 2.1351279795710955E-4 0.0 0.0 1.0675639897855478E-4 0.0 8 2.1351279795710955E-4 0.0 0.0 1.0675639897855478E-4 0.0 9 2.1351279795710955E-4 0.0 0.0 1.0675639897855478E-4 0.0 10 3.202691969356643E-4 0.0 0.0 1.0675639897855478E-4 0.0 11 3.202691969356643E-4 0.0 0.0 1.0675639897855478E-4 0.0 12 3.202691969356643E-4 0.0 0.0 3.202691969356643E-4 0.0 13 3.202691969356643E-4 0.0 0.0 4.270255959142191E-4 0.0 14 3.202691969356643E-4 0.0 0.0 5.337819948927738E-4 0.0 15 3.202691969356643E-4 0.0 0.0 8.540511918284382E-4 0.0 16 3.202691969356643E-4 0.0 0.0 0.0012810767877426573 0.0 17 3.202691969356643E-4 0.0 0.0 0.001921615181613986 0.0 18 3.202691969356643E-4 0.0 0.0 0.0021351279795710954 0.0 19 3.202691969356643E-4 0.0 0.0 0.002882422772420979 0.0 20 3.202691969356643E-4 0.0 0.0 0.005658089145863403 0.0 21 3.202691969356643E-4 0.0 0.0 0.011743203887641026 0.0 22 3.202691969356643E-4 0.0 0.0 0.0167607546396331 0.0 23 3.202691969356643E-4 0.0 0.0 0.020283715805925407 0.0 24 3.202691969356643E-4 0.0 0.0 0.027329638138510023 0.0 25 3.202691969356643E-4 0.0 0.0 0.03085259930480233 0.0 26 3.202691969356643E-4 0.0 0.0 0.03864581643023683 0.0 27 3.202691969356643E-4 0.0 0.0 0.08689970876854358 0.0 28 3.202691969356643E-4 0.0 0.0 0.18180614746047877 0.0 29 3.202691969356643E-4 0.0 0.0 0.300198993927696 0.0 30 3.202691969356643E-4 0.0 0.0 0.4987658960278079 0.0 31 3.202691969356643E-4 0.0 0.0 0.7302137690133147 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5145 0.0 31.462585 1 GCTCGGT 25 0.0054958304 29.6 12 CAATCGT 70 1.9221261E-7 23.785715 14 GTATCAA 7470 0.0 21.670013 2 CCGAATT 125 1.8189894E-11 20.72 14 TGTACCC 45 0.0038252876 20.555555 3 TCACGTA 45 0.0038252876 20.555555 25 CGAATTA 130 3.274181E-11 19.923077 15 CGGGATA 75 9.262769E-6 19.733334 24 CCCGAAT 150 0.0 19.733334 13 TCGTTTC 85 1.2448036E-6 19.588236 17 GCCCCGA 135 5.638867E-11 19.185184 11 GATACTG 280 0.0 19.160715 36 AGCCGTC 80 1.6161503E-5 18.5 12 ATCTCGT 50 0.007033934 18.5 7 CGAGTAG 50 0.007033934 18.5 3 CGACTAT 50 0.007033934 18.5 36 TATACCG 110 3.8493454E-8 18.5 5 TACGTTA 60 9.2350744E-4 18.5 19 CCGACCG 175 0.0 17.97143 9 >>END_MODULE