##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3203976_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2682104 Sequences flagged as poor quality 0 Sequence length 75 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.63050388799241 35.0 32.0 35.0 27.0 35.0 2 32.63812626206888 35.0 32.0 35.0 27.0 35.0 3 32.655847797102574 35.0 32.0 35.0 27.0 35.0 4 32.77858725836135 35.0 32.0 35.0 30.0 35.0 5 32.86072874131652 35.0 33.0 35.0 30.0 35.0 6 36.38306046297981 39.0 36.0 40.0 27.0 40.0 7 36.18303540802295 39.0 36.0 40.0 27.0 40.0 8 36.0319577466049 39.0 36.0 40.0 27.0 40.0 9 36.011390684328425 39.0 36.0 40.0 27.0 40.0 10 35.946651211138715 39.0 36.0 40.0 27.0 40.0 11 36.01701611868891 39.0 36.0 40.0 27.0 40.0 12 36.036434828776216 39.0 36.0 40.0 27.0 40.0 13 36.02795305476596 39.0 36.0 40.0 27.0 40.0 14 35.96767947849897 39.0 36.0 40.0 27.0 40.0 15 35.94834801335071 39.0 36.0 40.0 27.0 40.0 16 35.943001091680266 39.0 36.0 40.0 27.0 40.0 17 35.68353016885251 39.0 35.0 40.0 27.0 40.0 18 35.64096843373709 39.0 35.0 40.0 27.0 40.0 19 35.82375478355798 39.0 36.0 40.0 27.0 40.0 20 35.803015468453125 39.0 36.0 40.0 27.0 40.0 21 35.60505185481249 39.0 35.0 40.0 27.0 40.0 22 35.61237446422659 39.0 35.0 40.0 27.0 40.0 23 35.410378195625526 39.0 35.0 40.0 27.0 40.0 24 35.469597002949925 39.0 35.0 40.0 27.0 40.0 25 35.245449840871196 39.0 35.0 40.0 16.0 40.0 26 35.294620566540296 39.0 35.0 40.0 27.0 40.0 27 35.38783469992215 39.0 35.0 40.0 27.0 40.0 28 35.371807357209114 39.0 35.0 40.0 27.0 40.0 29 35.33714501749373 39.0 35.0 40.0 27.0 40.0 30 35.26221913840776 39.0 35.0 40.0 16.0 40.0 31 35.29915320211297 39.0 35.0 40.0 16.0 40.0 32 35.08394342650397 39.0 34.0 40.0 16.0 40.0 33 35.301329851489726 39.0 35.0 40.0 27.0 40.0 34 35.31849510682658 39.0 35.0 40.0 27.0 40.0 35 35.36158329430924 39.0 35.0 40.0 27.0 40.0 36 35.34158145992848 39.0 35.0 40.0 27.0 40.0 37 35.156989810984214 39.0 35.0 40.0 16.0 40.0 38 35.19752589757891 39.0 35.0 40.0 16.0 40.0 39 35.21107123362852 39.0 35.0 40.0 16.0 40.0 40 35.26721969021335 39.0 35.0 40.0 27.0 40.0 41 35.376325079116995 39.0 35.0 40.0 27.0 40.0 42 35.13236846893334 39.0 35.0 40.0 16.0 40.0 43 35.118996877078594 39.0 35.0 40.0 16.0 40.0 44 35.161154451878076 39.0 35.0 40.0 16.0 40.0 45 34.97745762282149 39.0 34.0 40.0 16.0 40.0 46 34.9129325335632 39.0 34.0 40.0 16.0 40.0 47 34.98940645105484 39.0 34.0 40.0 16.0 40.0 48 34.882827809809015 39.0 34.0 40.0 16.0 40.0 49 34.89409321935317 39.0 34.0 40.0 16.0 40.0 50 34.81110799581224 39.0 34.0 40.0 16.0 40.0 51 34.54550681107071 39.0 34.0 40.0 16.0 40.0 52 34.79519101421869 39.0 34.0 40.0 16.0 40.0 53 34.79137162466481 39.0 34.0 40.0 16.0 40.0 54 34.73647479739786 39.0 34.0 40.0 16.0 40.0 55 34.656873111557196 39.0 34.0 40.0 16.0 40.0 56 34.67523742554353 39.0 34.0 40.0 16.0 40.0 57 34.628003612089614 39.0 34.0 40.0 16.0 40.0 58 34.66834544820037 39.0 34.0 40.0 16.0 40.0 59 34.620238066831114 39.0 34.0 40.0 16.0 40.0 60 34.359195989417266 39.0 34.0 40.0 16.0 40.0 61 34.563662333749924 39.0 34.0 40.0 16.0 40.0 62 34.307976499047015 39.0 34.0 40.0 16.0 40.0 63 34.46001534616107 39.0 34.0 40.0 16.0 40.0 64 34.43560316825895 39.0 34.0 40.0 16.0 40.0 65 34.39685672143958 39.0 34.0 40.0 16.0 40.0 66 34.39802185150166 39.0 34.0 40.0 16.0 40.0 67 34.37258771471949 39.0 34.0 40.0 16.0 40.0 68 34.293437912922094 39.0 34.0 40.0 16.0 40.0 69 34.181240921306554 39.0 34.0 40.0 16.0 40.0 70 34.10498437047929 39.0 34.0 40.0 16.0 40.0 71 34.05397963688209 39.0 34.0 40.0 16.0 40.0 72 34.05642585075001 39.0 34.0 40.0 16.0 40.0 73 33.90973877224746 39.0 34.0 40.0 16.0 40.0 74 33.83093720452302 39.0 34.0 40.0 16.0 40.0 75 33.7655929822259 39.0 34.0 40.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 739.0 3 1401.0 4 1217.0 5 1148.0 6 1527.0 7 2171.0 8 3120.0 9 4774.0 10 4375.0 11 3461.0 12 3735.0 13 4323.0 14 2548.0 15 3016.0 16 3529.0 17 4111.0 18 4847.0 19 6941.0 20 12777.0 21 21223.0 22 29096.0 23 37088.0 24 44235.0 25 50377.0 26 54188.0 27 59072.0 28 64531.0 29 69652.0 30 75805.0 31 82190.0 32 89234.0 33 98057.0 34 109913.0 35 126167.0 36 153758.0 37 208343.0 38 357614.0 39 881801.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.86561340779954 18.819324647100814 13.42843485493529 24.88662709016435 2 15.069288886635269 20.263009935483485 39.93226959133575 24.735431586545488 3 17.994042641438774 26.203836252458924 29.38083306043071 26.42128804567159 4 12.106761345472574 17.324266828012565 38.453951699932446 32.11502012658242 5 13.434520331793331 38.27733534772715 34.708547365783616 13.5795969546959 6 30.955921875460433 38.50950744507719 17.4772716167226 13.057299062739775 7 27.536926234031196 32.36585904200583 22.15238484413729 17.94482987982569 8 25.90563557544399 35.477742040740225 20.14502400596653 18.47159837784925 9 26.489705718407336 15.41590060935346 18.99991163386742 39.09448203837178 10 13.576963143087026 29.405369370739816 34.4975321594779 22.520135326695257 11 34.52889083761357 23.145853093998127 24.276312257279383 18.048943811108924 12 23.283749703586935 24.628197346226866 31.013344926377705 21.074708023808494 13 27.861568530072578 22.036831143613274 26.405533321551424 23.696067004762725 14 21.98723137548503 20.812678991350996 27.66969060525875 29.53039902790522 15 23.16331959855317 29.043821418277933 24.21757055092116 23.57528843224774 16 23.332821263524796 28.256223326072384 25.4590544258119 22.951900984590925 17 21.897574662990117 27.940491215712814 26.88632452261985 23.275609598677217 18 22.20418514936865 27.422196893036293 27.730858951087495 22.642759006507557 19 22.94149191259773 27.15904590506038 27.967748840421574 21.931713341920318 20 23.169532500687076 26.478538780773487 28.004837318502666 22.347091400036767 21 23.42223211163737 26.395775640749957 27.834585819451274 22.3474064281614 22 22.935991165159976 26.541169853389672 27.82828756910633 22.69455141234402 23 22.99294971277026 26.20718191066323 27.642314072487768 23.157554304078744 24 22.579263325061287 26.46687365548001 27.910263967051986 23.043599052406712 25 22.91144262334799 26.49377354605032 27.7430391515548 22.85174467904689 26 22.693021592214002 26.78861467216355 27.85245006682856 22.665913668793884 27 22.840418599561787 26.95455695731318 27.505312210582762 22.699712232542275 28 22.8344197979662 26.52686615728118 27.695423384608482 22.94329066014414 29 22.878178135794496 26.731800573224508 27.534104300988744 22.855916989992263 30 22.951301746266086 26.487830889182533 27.65939124738556 22.90147611716581 31 22.91533585756964 26.12169441980214 27.951217213476493 23.011752509151727 32 22.695732123305927 26.81504110649436 27.63408367682871 22.855143093371 33 22.94339766958709 26.415920626332685 27.639243052610702 23.001438651469527 34 23.0595062315712 26.662014119209935 27.69926292278716 22.579216726431707 35 23.02208396784414 26.592796644397705 27.721864369762482 22.663255017995674 36 23.212699592679133 26.56069126041486 27.298473609543056 22.92813553736295 37 22.983404614179868 26.461018914523223 27.670321064996084 22.885255406300825 38 22.981446100891127 26.458718204314362 27.58312743166703 22.976708263127477 39 23.221058598922895 26.68303371241491 27.24974392122222 22.84616376743998 40 23.095601835053493 26.26938257391031 27.99212345288153 22.642892138154664 41 22.918865959527402 26.483319029749588 27.517178323619984 23.08063668710303 42 23.17770657935355 26.30331406062762 27.59872263960742 22.92025672041141 43 22.96107261959845 26.23764232464906 27.68974182647998 23.111543229272513 44 23.01798311068297 26.712516511245692 27.383644833282013 22.885855544789326 45 23.060712456205295 26.505808757819484 27.291552155428672 23.14192663054655 46 23.36820205712508 26.38490255054195 26.9938962284046 23.25299916392837 47 23.00852163313229 26.513347068655424 27.190515897201955 23.28761540101033 48 22.86923835387789 26.67976851898591 27.104120465250364 23.346872661885836 49 23.180173912265357 26.335978332926928 27.226419273076264 23.257428481731456 50 23.298760199310674 26.53644011805921 27.24515332336084 22.919646359269276 51 23.014023447807894 26.78614242092962 26.6080597127455 23.591774418516984 52 23.07705538355693 26.746982545878762 27.0490644770494 23.126897593514904 53 23.050513729682354 26.77694683152979 27.08792538010463 23.084614058683226 54 22.79073263097439 26.65565117767767 27.164734282175996 23.388881909171946 55 23.016324386781083 26.513491434786246 27.165372190245108 23.304811988187566 56 22.9840178519829 26.903736127708044 27.03113843675838 23.081107583550672 57 23.22010155774321 26.727456645566903 26.666905292687865 23.38553650400202 58 22.939217132096807 26.736594609874764 27.18892510092089 23.135263157107538 59 22.992878448918717 26.910402684563756 27.01905294556301 23.077665920954512 60 23.07867609978102 27.03585328054941 26.938603903588486 22.946866716081082 61 23.126638446822323 26.84530452040744 27.06961164219584 22.958445390574404 62 22.86030146910802 27.169932413308608 26.96731104385806 23.002455073725315 63 22.829006533822714 26.949893439481233 27.1273700207752 23.093730005920857 64 22.969407202145636 26.97366526912232 27.024703743157946 23.032223785574097 65 23.120131986724854 26.84798471701091 26.961460011298794 23.07042328496544 66 22.945442233589304 27.002988271389032 26.920842503107966 23.130726991913694 67 22.940590810443965 26.903838552581533 26.903875841804204 23.251694795170298 68 22.94295136346077 26.939480627566326 27.159813442352526 22.95775456662038 69 23.12911484046217 26.847775116092443 26.801928978124735 23.22118106532065 70 22.86906558437298 26.658543215199604 27.079512967840508 23.392878232586913 71 23.142027960761848 26.641486467134467 26.879378192276484 23.3371073798272 72 22.888728323157572 26.893739273832107 26.893289323157948 23.324243079852373 73 23.08203472703631 26.577821100908878 26.9406191768746 23.39952499518022 74 23.031341418424727 26.75642775295557 26.843185354023287 23.36904547459642 75 23.100955664124072 26.791128720850192 26.914881908418163 23.19303370660757 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 90.0 1 93.5 2 168.5 3 264.5 4 289.0 5 256.0 6 264.5 7 416.5 8 527.0 9 994.0 10 1957.5 11 2463.0 12 2472.0 13 2372.5 14 2441.0 15 2821.0 16 3033.0 17 3360.0 18 4029.5 19 4843.5 20 5315.0 21 6238.5 22 8606.5 23 11766.5 24 13482.0 25 16120.5 26 22013.5 27 28063.5 28 30859.0 29 35334.5 30 44020.5 31 52634.5 32 57038.0 33 61059.0 34 69566.0 35 78323.0 36 82594.0 37 85780.5 38 92657.5 39 99814.0 40 103280.0 41 107267.0 42 114164.0 43 120200.0 44 123326.0 45 125792.5 46 129903.0 47 133254.0 48 134961.0 49 135588.0 50 134097.5 51 130300.5 52 128621.0 53 124922.0 54 117452.0 55 108635.0 56 103589.0 57 99325.5 58 87191.5 59 71350.0 60 63379.0 61 57894.5 62 45472.5 63 33220.0 64 27905.0 65 23031.5 66 15112.5 67 10382.5 68 8698.0 69 7052.0 70 4335.5 71 2615.5 72 1966.0 73 1812.0 74 1351.5 75 772.5 76 500.0 77 415.0 78 218.0 79 91.5 80 77.0 81 56.0 82 26.0 83 9.0 84 1.0 85 1.0 86 0.5 87 1.0 88 2.0 89 1.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.08318096539134948 2 0.0 3 0.03914837008557461 4 0.049252377983851486 5 0.002721743824997092 6 0.04492741519344515 7 0.0 8 0.017859113591419274 9 0.003020017120887184 10 7.456832397252307E-5 11 2.9827329589009226E-4 12 0.0013422298315054152 13 9.693882116427998E-4 14 0.002274333881161953 15 0.003914837008557461 16 0.006636580833554553 17 0.06312208624274078 18 0.29760218097433955 19 0.019611469204773566 20 0.016889725379776475 21 0.3015915863068695 22 0.3036794993781002 23 0.9709541464462228 24 0.690278975013646 25 1.5089646039079767 26 0.971401556390058 27 0.8450455314186176 28 0.3092348395140531 29 0.848662095131285 30 0.8511974181463507 31 0.3091602711900806 32 0.9722218079537557 33 0.560119965519607 34 0.3094585444859707 35 0.30304566862433374 36 0.8949317401562357 37 0.9673002985715692 38 0.8449709630946451 39 0.5576219266665274 40 0.841242546896019 41 0.2963718036287929 42 0.8410188419241014 43 0.564407644148027 44 0.8408697052761563 45 0.28686434232229624 46 0.28678977399832367 47 0.28835570880174666 48 0.2860813749205847 49 0.002311618043148215 50 0.002237049719175692 51 1.0963034990440341 52 0.2857458174627084 53 0.28496285006099686 54 0.28664063735037865 55 0.5497549684874263 56 0.001826923937326815 57 0.003094585444859707 58 0.28828114047777414 59 0.0038775528465711992 60 0.856081643366551 61 0.0024980388530795226 62 0.5431183876538718 63 0.002237049719175692 64 0.28526112335688697 65 0.5429692510059267 66 0.010663270328070799 67 0.013571434962999198 68 0.009395608820537905 69 0.29611081449488913 70 0.5566152542928984 71 0.023563590375317287 72 0.564668633281931 73 0.016666020407858907 74 0.8564544849864136 75 0.06595568255369666 >>END_MODULE >>Sequence Length Distribution pass #Length Count 75 2682104.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.13486289001837 #Duplication Level Percentage of deduplicated Percentage of total 1 75.92014574979395 45.6544755525407 2 12.991731552082522 15.625119911768163 3 4.837414881776887 8.726918419733625 4 2.2497765290773866 5.411600124370003 5 1.2056275153127838 3.6250122664883886 6 0.7520254540999005 2.7133768543260794 7 0.47459245290319885 1.9977686458779953 8 0.3100551025822326 1.4916096865706514 9 0.23392428758850628 1.2660304464702046 >10 0.9617257632141172 9.745142724722642 >50 0.04552217224276387 1.859053996306002 >100 0.01708055954285573 1.7349356611176452 >500 3.149831523945466E-4 0.10739812742534846 >1k 6.299663047048632E-5 0.041557582282558056 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 3.728416198626153E-5 0.0 11 0.0 0.0 0.0 7.456832397252307E-5 0.0 12 0.0 0.0 0.0 7.456832397252307E-5 0.0 13 0.0 0.0 0.0 7.456832397252307E-5 0.0 14 0.0 0.0 0.0 7.456832397252307E-5 0.0 15 0.0 0.0 0.0 7.456832397252307E-5 0.0 16 0.0 0.0 0.0 7.456832397252307E-5 0.0 17 0.0 0.0 0.0 7.456832397252307E-5 0.0 18 0.0 0.0 0.0 7.456832397252307E-5 0.0 19 0.0 0.0 0.0 7.456832397252307E-5 0.0 20 0.0 0.0 0.0 1.1185248595878459E-4 0.0 21 0.0 0.0 0.0 1.1185248595878459E-4 0.0 22 0.0 0.0 0.0 1.1185248595878459E-4 0.0 23 0.0 0.0 0.0 1.1185248595878459E-4 0.0 24 0.0 0.0 0.0 1.4913664794504613E-4 0.0 25 0.0 0.0 0.0 1.8642080993130767E-4 0.0 26 0.0 0.0 0.0 2.609891339038307E-4 0.0 27 0.0 0.0 0.0 2.9827329589009226E-4 0.0 28 0.0 0.0 0.0 4.4740994383513837E-4 0.0 29 0.0 0.0 0.0 0.0010066723736290614 0.0 30 0.0 0.0 0.0 0.0017896397753405535 0.0 31 0.0 0.0 0.0 0.004287678628420076 0.0 32 0.0 0.0 0.0 0.007494116559238568 0.0 33 0.0 0.0 0.0 0.010588702004098276 0.0 34 0.0 0.0 0.0 0.014428970688683212 0.0 35 0.0 0.0 0.0 0.018269239373268152 0.0 36 0.0 0.0 0.0 0.022817907135592057 0.0 37 0.0 0.0 0.0 0.029118930511270257 0.0 38 0.0 0.0 0.0 0.03881281262769826 0.0 39 0.0 0.0 0.0 0.05048275532939812 0.0 40 0.0 0.0 0.0 0.06066133155164751 0.0 41 0.0 0.0 0.0 0.07180929598553971 0.0 42 0.0 0.0 0.0 0.08336738620128079 0.0 43 0.0 0.0 0.0 0.09582029630469213 0.0 44 0.0 0.0 0.0 0.10905617380981499 0.0 45 0.0 0.0 0.0 0.12158365223719886 0.0 46 0.0 0.0 0.0 0.13687015865156607 0.0 47 0.0 0.0 0.0 0.15234308587586462 0.0 48 0.0 0.0 0.0 0.16900910628372354 0.0 49 0.0 0.0 0.0 0.18664451490322523 0.0 50 0.0 0.0 0.0 0.2038325135788918 0.0 51 0.0 0.0 0.0 0.22120693306448966 0.0 52 0.0 0.0 0.0 0.24033370816344182 0.0 53 0.0 0.0 0.0 0.26001974569218794 0.0 54 0.0 0.0 0.0 0.281980117102096 0.0 55 0.0 0.0 0.0 0.30308295278631997 0.0 56 0.0 0.0 0.0 0.32675839564759607 0.0 57 0.0 0.0 0.0 0.3480476521417514 0.0 58 0.0 0.0 0.0 0.3740347130461757 0.0 59 0.0 0.0 0.0 0.4003946155704626 0.0 60 0.0 0.0 0.0 0.42925255694782904 0.0 61 0.0 0.0 0.0 0.4571783942755389 0.0 62 0.0 0.0 0.0 0.4878259754282459 0.0 63 0.0 0.0 0.0 0.5198903547364307 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4555 0.0 41.976357 1 GGTATCA 1800 0.0 35.72454 1 TATCAAC 6160 0.0 30.57856 2 ATCAACG 6090 0.0 30.42483 3 TCAACGC 6080 0.0 30.240364 4 CAACGCA 6185 0.0 29.936274 5 AACGCAG 6330 0.0 29.305042 6 ACGCAGA 7460 0.0 24.580765 7 CGCAGAG 7785 0.0 23.423878 8 CGTACTA 1425 0.0 23.355268 29 GCGATAC 260 0.0 22.404972 14 ACCGTAC 1515 0.0 21.967825 27 TATGCCG 1490 0.0 21.954123 43 GAGTACT 5175 0.0 21.651196 12 AGAGTAC 7980 0.0 21.490927 11 GACCGTA 1550 0.0 21.471779 26 CCGTACT 1585 0.0 20.997639 28 CAGAGTA 8460 0.0 20.622326 10 GTACATG 6635 0.0 20.620556 1 TCGTATG 1685 0.0 20.549181 40 >>END_MODULE