##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3203973_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3072142 Sequences flagged as poor quality 0 Sequence length 75 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.76115850113699 35.0 33.0 35.0 27.0 35.0 2 32.81978697599265 35.0 33.0 35.0 27.0 35.0 3 32.74730432382357 35.0 32.0 35.0 30.0 35.0 4 32.8140883461767 35.0 33.0 35.0 30.0 35.0 5 32.89842819765492 35.0 33.0 35.0 30.0 35.0 6 36.42896910364169 39.0 36.0 40.0 27.0 40.0 7 36.26615338744107 39.0 36.0 40.0 27.0 40.0 8 36.08997761171196 39.0 36.0 40.0 27.0 40.0 9 36.07023633673183 39.0 36.0 40.0 27.0 40.0 10 36.03134816033894 39.0 36.0 40.0 27.0 40.0 11 36.112925118695685 39.0 36.0 40.0 27.0 40.0 12 36.10769717024799 39.0 36.0 40.0 27.0 40.0 13 36.09388237913482 39.0 36.0 40.0 27.0 40.0 14 36.031803217429406 39.0 36.0 40.0 27.0 40.0 15 36.017638182089236 39.0 36.0 40.0 27.0 40.0 16 35.998073656751544 39.0 36.0 40.0 27.0 40.0 17 35.73283624259556 39.0 36.0 40.0 27.0 40.0 18 35.68953518424604 39.0 35.0 40.0 27.0 40.0 19 35.895593367754486 39.0 36.0 40.0 27.0 40.0 20 35.881753187189915 39.0 36.0 40.0 27.0 40.0 21 35.67378070414714 39.0 35.0 40.0 27.0 40.0 22 35.67133094759292 39.0 35.0 40.0 27.0 40.0 23 35.476205201452274 39.0 35.0 40.0 27.0 40.0 24 35.52226622337118 39.0 35.0 40.0 27.0 40.0 25 35.29246141617152 39.0 35.0 40.0 16.0 40.0 26 35.336583725622056 39.0 35.0 40.0 27.0 40.0 27 35.42647833335829 39.0 35.0 40.0 27.0 40.0 28 35.41244708089665 39.0 35.0 40.0 27.0 40.0 29 35.3911515157828 39.0 35.0 40.0 27.0 40.0 30 35.304545493014324 39.0 35.0 40.0 16.0 40.0 31 35.35010914209044 39.0 35.0 40.0 27.0 40.0 32 35.12991912483212 39.0 35.0 40.0 16.0 40.0 33 35.33627416961846 39.0 35.0 40.0 27.0 40.0 34 35.358466177670174 39.0 35.0 40.0 27.0 40.0 35 35.4093358965829 39.0 35.0 40.0 27.0 40.0 36 35.39469562279348 39.0 35.0 40.0 27.0 40.0 37 35.19648863887151 39.0 35.0 40.0 16.0 40.0 38 35.246486327780424 39.0 35.0 40.0 16.0 40.0 39 35.2628120705358 39.0 35.0 40.0 27.0 40.0 40 35.31618167389398 39.0 35.0 40.0 27.0 40.0 41 35.43704327469238 39.0 35.0 40.0 27.0 40.0 42 35.16702385501712 39.0 35.0 40.0 16.0 40.0 43 35.12413749104045 39.0 35.0 40.0 16.0 40.0 44 35.166652778419746 39.0 35.0 40.0 16.0 40.0 45 34.99546049629216 39.0 34.0 40.0 16.0 40.0 46 34.91843801490947 39.0 34.0 40.0 16.0 40.0 47 35.00077437826767 39.0 34.0 40.0 16.0 40.0 48 34.88480773349669 39.0 34.0 40.0 16.0 40.0 49 34.893512734762915 39.0 34.0 40.0 16.0 40.0 50 34.81484742567238 39.0 34.0 40.0 16.0 40.0 51 34.49457381852792 39.0 34.0 40.0 16.0 40.0 52 34.78404448752694 39.0 34.0 40.0 16.0 40.0 53 34.79036222935007 39.0 34.0 40.0 16.0 40.0 54 34.729561328870865 39.0 34.0 40.0 16.0 40.0 55 34.65419111486383 39.0 34.0 40.0 16.0 40.0 56 34.67810309549493 39.0 34.0 40.0 16.0 40.0 57 34.61319170793538 39.0 34.0 40.0 16.0 40.0 58 34.669129877460094 39.0 34.0 40.0 16.0 40.0 59 34.62129940608214 39.0 34.0 40.0 16.0 40.0 60 34.31982831522762 39.0 34.0 40.0 16.0 40.0 61 34.55824600555573 39.0 34.0 40.0 16.0 40.0 62 34.29849043436143 39.0 34.0 40.0 16.0 40.0 63 34.45649354749878 39.0 34.0 40.0 16.0 40.0 64 34.43869521656225 39.0 34.0 40.0 16.0 40.0 65 34.39257853315374 39.0 34.0 40.0 16.0 40.0 66 34.40509716022241 39.0 34.0 40.0 16.0 40.0 67 34.385392341890444 39.0 34.0 40.0 16.0 40.0 68 34.316716805408085 39.0 34.0 40.0 16.0 40.0 69 34.205894128591716 39.0 34.0 40.0 16.0 40.0 70 34.125966508058546 39.0 34.0 40.0 16.0 40.0 71 34.09320467608594 39.0 34.0 40.0 16.0 40.0 72 34.09748768123348 39.0 34.0 40.0 16.0 40.0 73 33.94040737700276 39.0 34.0 40.0 16.0 40.0 74 33.87216020613631 39.0 34.0 40.0 16.0 40.0 75 33.80400417689026 39.0 34.0 40.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 713.0 3 1386.0 4 1276.0 5 1266.0 6 1572.0 7 2227.0 8 3563.0 9 6014.0 10 5699.0 11 4126.0 12 4283.0 13 4840.0 14 2769.0 15 3198.0 16 3752.0 17 4494.0 18 5252.0 19 7480.0 20 13621.0 21 22948.0 22 32330.0 23 40824.0 24 49975.0 25 57308.0 26 62051.0 27 67770.0 28 73680.0 29 80438.0 30 87714.0 31 94638.0 32 102984.0 33 113398.0 34 126364.0 35 144587.0 36 175665.0 37 237619.0 38 406973.0 39 1017345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.191132466346126 17.82156187358632 13.222852678741589 24.76445298132597 2 15.043933516093983 19.542065438381428 40.82366635396411 24.590334691560482 3 18.99821776716478 25.1953927018005 28.490846396148058 27.31554313488666 4 12.04893161565064 16.724739470280937 38.0108129725709 33.21551594149753 5 13.693948532990024 37.97995810635517 34.38765130295094 13.938442057703856 6 31.97888852087748 37.76506998567361 17.062539467594966 13.19350202585394 7 28.111070386720407 31.788764972452444 21.537350812560096 18.562813828267053 8 25.74758850556526 36.30854887758766 19.27011049135593 18.67375212549115 9 26.05317888066083 15.881073265084837 18.826181824337105 39.23956602991723 10 13.488526065081082 29.766869120745593 34.22611035901068 22.518494455162642 11 35.484905241516785 23.063637363832083 23.21688628656507 18.23457110808606 12 23.364283982103416 24.66046785662553 30.950149653575167 21.025098507695887 13 28.22849899791706 21.909989287461578 25.858524833656183 24.002986880965178 14 21.671681202472993 20.75148702714685 27.777370885875285 29.799460884504875 15 23.31911566377463 29.16976860995072 24.0352291781345 23.475886548140153 16 23.236382824893038 28.47569477110502 25.331593265560105 22.956329138441838 17 21.996942123133287 27.928141847963456 26.78557469062937 23.289341338273882 18 22.075258120948103 27.435157371699066 27.920413320200648 22.569171187152186 19 22.966429755133536 27.011333335503846 28.179471067599554 21.842765841763065 20 22.96934644491362 26.516928556429338 28.349858460697003 22.163866537960043 21 23.24381117037438 26.190214830975545 28.183375052843623 22.382598945806453 22 22.63502829288692 26.35077299042093 28.255870937389737 22.758327779302416 23 22.78460818339499 26.286486257118636 27.918875899111967 23.010029660374403 24 22.382028055676027 26.3989074853708 28.260981447116396 22.958083011836777 25 22.802515115832925 26.283688130928912 28.155603773335276 22.758192979902887 26 22.548307228148797 26.606466357880223 28.183665326457618 22.66156108751336 27 22.645015915128948 26.755353800757497 27.9292198088082 22.67041047530535 28 22.58991574069869 26.68473677830776 27.887381557834868 22.83796592315868 29 22.837851556198892 26.656063897834954 27.92865898190422 22.577425564061937 30 22.71581567381064 26.524404867897722 28.05713820127486 22.702641257016772 31 22.801881133384825 26.373734443141917 27.976108795742682 22.848275627730576 32 22.522420580619357 26.626840750721037 28.076218132249846 22.77452053640976 33 22.632993908156156 26.43476541425062 28.117322993436733 22.81491768415649 34 22.826721225027754 26.65192710943713 28.065656918781272 22.455694746753846 35 22.88511329239746 26.500472902444884 28.08161691798287 22.53279688717479 36 22.77375794352774 26.71829014723177 27.879867762901434 22.62808414633906 37 22.722332922619874 26.432568765997928 27.95929134495391 22.885806966428284 38 22.7145397509127 26.514285676741046 27.94710763132504 22.82406694102122 39 22.89774085095378 26.771063512173082 27.74906782684986 22.582127810023277 40 22.96818255732018 26.424689192318873 28.074971625299554 22.53215662506139 41 22.714186263867113 26.59843213684975 27.83840758365677 22.848974015626364 42 22.905429843294662 26.503447136299773 27.878031129511605 22.713091890893956 43 22.706736755236566 26.394285240465432 27.952301841873346 22.946676162424655 44 22.687044449735403 26.819438652893226 27.744285438045164 22.74923145932621 45 22.841647895641813 26.723003694973897 27.56482536414046 22.870523045243832 46 22.933099543875375 26.595358268843068 27.40693607330397 23.064606113977586 47 22.793630074743923 26.700357289149423 27.43613513617688 23.06987749992977 48 22.636882223668152 26.875409934593385 27.51053090939498 22.97717693234348 49 22.974373564075204 26.631038045456112 27.41725264659372 22.97733574387496 50 23.00232254956373 26.864981258473563 27.319432757551542 22.81326343441117 51 22.763555718124763 27.007501800069534 27.103955869050502 23.1249866127552 52 22.951166660242745 26.999118725163108 27.14522481654262 22.90448979805153 53 22.817718646231356 27.019027939916995 27.284420894607802 22.878832519243847 54 22.69837811565084 26.965064468049178 27.416061531848257 22.920495884451725 55 22.785301541381354 26.775498553676336 27.358119690853023 23.08108021408929 56 22.60747370589995 27.164846454043957 27.3734024244835 22.85427741557259 57 22.900845111135272 26.978354972718293 27.012566967293854 23.10823294885258 58 22.83511352585915 26.876600793173523 27.374906618696905 22.913379062270426 59 22.93891677346501 27.078742794977455 27.152440975537345 22.829899456020186 60 22.845279553524794 27.166824324057643 27.238033277769517 22.749862844648046 61 23.01297901456884 26.884873744969134 27.373246928095895 22.728900312366132 62 22.766819532577916 27.24124872388986 27.273390824706734 22.718540918825482 63 22.795695914595363 26.805092872595505 27.522917861576836 22.876293351232302 64 22.759814835138993 26.906360567149047 27.405333615549036 22.928490982162923 65 22.827027269415463 26.86488951063783 27.309053047920894 22.999030172025815 66 22.74099886124583 27.054559281302232 27.285793439499862 22.918648417952078 67 22.92150589758123 26.884935717650553 27.343251240443756 22.850307144324464 68 22.82796872975537 27.04487463710226 27.49480598033337 22.632350652809002 69 22.972046350612835 26.96645620875874 27.215647431661072 22.845850008967357 70 22.704646162548908 26.725844721115017 27.445121280529644 23.124387835806434 71 22.85507490803766 26.73640979290648 27.365576098713078 23.04293920034278 72 22.683261641270793 26.97381796491012 27.279334516069575 23.06358587774951 73 22.922697111930166 26.833176681478864 27.254687916623666 22.989438289967303 74 22.855335828128542 26.90994753044844 27.17889915792448 23.05581748349854 75 22.89969766043508 26.901837033697735 27.262872558108022 22.935592747759163 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 107.0 1 107.0 2 224.5 3 389.5 4 437.0 5 369.0 6 363.5 7 633.5 8 841.0 9 1546.0 10 3036.5 11 3878.5 12 3935.0 13 3858.0 14 3934.5 15 4391.0 16 4694.0 17 5069.5 18 5982.0 19 7289.0 20 8059.0 21 9267.5 22 12341.5 23 16105.0 24 18003.0 25 20705.5 26 26915.0 27 33477.0 28 36532.0 29 40852.5 30 49506.0 31 58215.0 32 62591.0 33 66934.5 34 76797.0 35 87808.0 36 93300.0 37 97179.0 38 105361.0 39 113888.5 40 118113.0 41 123450.5 42 132507.5 43 139805.0 44 143383.0 45 145641.5 46 149506.0 47 151880.5 48 152649.0 49 153581.5 50 152998.5 51 148924.5 52 146366.0 53 143018.0 54 135223.5 55 123992.5 56 117208.0 57 111207.5 58 96947.5 59 79743.5 60 70799.0 61 63685.5 62 49553.5 63 36814.5 64 31094.0 65 25673.5 66 16822.0 67 11496.0 68 9601.0 69 8013.5 70 5375.5 71 3503.0 72 2681.0 73 2334.5 74 1656.5 75 1024.0 76 723.0 77 586.5 78 349.0 79 187.5 80 127.0 81 94.5 82 42.0 83 13.5 84 5.0 85 3.0 86 2.0 87 2.0 88 1.0 89 1.0 90 1.5 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.08414324598277033 2 0.0 3 0.04150198786384223 4 0.05113695916399698 5 0.0025063945611889034 6 0.05159266726603132 7 0.0 8 0.016242738779652766 9 0.004329226969326288 10 1.6275289358369502E-4 11 5.208092594678241E-4 12 0.0015298771996867333 13 0.0013345737273862991 14 0.0023761922463219473 15 0.0046547327564936776 16 0.007519183683566711 17 0.06633807942471409 18 0.36056276044531793 19 0.021873988897648612 20 0.018130672345223628 21 0.3653476955166786 22 0.3678866406565842 23 1.0435390030799356 24 0.7019532300264766 25 1.5891843541086317 26 1.0438645088671032 27 0.9173729599738554 28 0.37338768845971315 29 0.9206280178455293 30 0.9232646147215852 31 0.37218331704719376 32 1.0441574640755538 33 0.5717834657382374 34 0.3725088228343612 35 0.36642186461433096 36 0.9676636040912172 37 1.038493663378841 38 0.9162662402974862 39 0.5680726997645291 40 0.9132715870555462 41 0.35913053498178144 42 0.9120997662217436 43 0.6820973770092659 44 1.0192888219359653 45 0.347835484167073 46 0.3482260911116739 47 0.35011402467724473 48 0.34757507953733907 49 0.0026040462973391204 50 0.0028319003483562935 51 1.2218510732902321 52 0.34724957375017174 53 0.34646835986096997 54 0.34838884400525755 55 0.5584051778856576 56 0.0021157876165880355 57 0.0039060694460086804 58 0.35053718220056235 59 0.004980238543661067 60 1.03491309972 61 0.003450361343974334 62 0.5520252644571768 63 0.0027342486122060765 64 0.34679386564813736 65 0.5520903656146102 66 0.011848410652892999 67 0.014940715630983202 68 0.011067196763691261 69 0.3593258384540819 70 0.5665753731435591 71 0.02525924908418947 72 0.5742898602994263 73 0.018716582762124928 74 0.9267800772229929 75 0.06783540604568408 >>END_MODULE >>Sequence Length Distribution pass #Length Count 75 3072142.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.06565813628075 #Duplication Level Percentage of deduplicated Percentage of total 1 79.23183934972035 52.34503611987341 2 12.153465719585437 16.058534228022776 3 4.026954913441664 7.981302799249589 4 1.747479064496228 4.617934179012619 5 0.8655185625233781 2.859052673113731 6 0.5154060921567863 2.0430385611471995 7 0.3349282181086001 1.5489077210429512 8 0.21578493607249793 1.1404779054019876 9 0.16498336582178055 0.9809761180099229 >10 0.7037855023547493 7.882127512997863 >50 0.030155895162218192 1.3235208391292024 >100 0.009399778572112378 1.060779466898693 >500 2.4883498687792587E-4 0.10659337543261105 >1k 4.976699723463892E-5 0.05171850066740747 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.2550578716739005E-5 0.0 10 0.0 0.0 0.0 3.2550578716739005E-5 0.0 11 0.0 0.0 0.0 3.2550578716739005E-5 0.0 12 0.0 0.0 0.0 3.2550578716739005E-5 0.0 13 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 14 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 15 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 16 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 17 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 18 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 19 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 20 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 21 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 22 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 23 3.2550578716739005E-5 0.0 0.0 3.2550578716739005E-5 0.0 24 6.510115743347801E-5 0.0 0.0 6.510115743347801E-5 0.0 25 6.510115743347801E-5 0.0 0.0 6.510115743347801E-5 0.0 26 6.510115743347801E-5 0.0 0.0 6.510115743347801E-5 0.0 27 6.510115743347801E-5 0.0 0.0 1.3020231486695602E-4 0.0 28 6.510115743347801E-5 0.0 0.0 2.6040462973391204E-4 0.0 29 6.510115743347801E-5 0.0 0.0 4.5570810203434607E-4 0.0 30 6.510115743347801E-5 0.0 0.0 8.788656253519531E-4 0.0 31 6.510115743347801E-5 0.0 0.0 0.002148338195304774 0.0 32 6.510115743347801E-5 0.0 0.0 0.0030597543993734666 0.0 33 6.510115743347801E-5 0.0 0.0 0.004329226969326288 0.0 34 6.510115743347801E-5 0.0 0.0 0.0055335983818456305 0.0 35 6.510115743347801E-5 0.0 0.0 0.007747037734583883 0.0 36 6.510115743347801E-5 0.0 0.0 0.0105138369255067 0.0 37 6.510115743347801E-5 0.0 0.0 0.014224602899214945 0.0 38 6.510115743347801E-5 0.0 0.0 0.019432695493893187 0.0 39 6.510115743347801E-5 0.0 0.0 0.024998844454455556 0.0 40 6.510115743347801E-5 0.0 0.0 0.030923049780902056 0.0 41 6.510115743347801E-5 0.0 0.0 0.03567543427354595 0.0 42 6.510115743347801E-5 0.0 0.0 0.04215299943817701 0.0 43 6.510115743347801E-5 0.0 0.0 0.04872821633895829 0.0 44 6.510115743347801E-5 0.0 0.0 0.05517323092487261 0.0 45 6.510115743347801E-5 0.0 0.0 0.061618245510786936 0.0 46 6.510115743347801E-5 0.0 0.0 0.06991864308355539 0.0 47 6.510115743347801E-5 0.0 0.0 0.0778609842904397 0.0 48 6.510115743347801E-5 0.0 0.0 0.08827716947979618 0.0 49 6.510115743347801E-5 0.0 0.0 0.0978144890438007 0.0 50 6.510115743347801E-5 0.0 0.0 0.10800282018214002 0.0 51 6.510115743347801E-5 0.0 0.0 0.11793074669074541 0.0 52 6.510115743347801E-5 0.0 0.0 0.1293559998203208 0.0 53 6.510115743347801E-5 0.0 0.0 0.13850271243972448 0.0 54 6.510115743347801E-5 0.0 0.0 0.15152294392642007 0.0 55 6.510115743347801E-5 0.0 0.0 0.16451062483439893 0.0 56 6.510115743347801E-5 0.0 0.0 0.17704259764034344 0.0 57 6.510115743347801E-5 0.0 0.0 0.1908765935949575 0.0 58 6.510115743347801E-5 0.0 0.0 0.20542670228133986 0.0 59 6.510115743347801E-5 0.0 0.0 0.22026976617617286 0.0 60 6.510115743347801E-5 0.0 0.0 0.2389212477808643 0.0 61 6.510115743347801E-5 0.0 0.0 0.25649856028790335 0.0 62 6.510115743347801E-5 0.0 0.0 0.2744664797395433 0.0 63 6.510115743347801E-5 0.0 0.0 0.29455018680777123 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5610 0.0 40.02728 1 GGTATCA 2575 0.0 35.970425 1 ATCAACG 7455 0.0 29.0052 3 TATCAAC 7600 0.0 28.94482 2 TCAACGC 7480 0.0 28.84989 4 CAACGCA 7645 0.0 28.392933 5 AACGCAG 7935 0.0 27.355257 6 ACGCAGA 8915 0.0 24.108263 7 CGCAGAG 9185 0.0 23.288158 8 AGAGTAC 9455 0.0 21.765326 11 GAGTACT 7020 0.0 21.369337 12 GTACATG 7135 0.0 21.316679 1 TCGATCG 185 1.1184966E-8 20.606375 41 CAGAGTA 10350 0.0 20.299631 10 GCGATAC 305 0.0 20.215784 14 TACATGG 7155 0.0 20.194324 2 AGTACTT 7410 0.0 20.154829 13 GCAGAGT 10560 0.0 20.154661 9 ACATGGG 7115 0.0 19.588676 3 TATACCG 160 1.5118458E-6 19.197874 5 >>END_MODULE