##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3203962_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2359674 Sequences flagged as poor quality 0 Sequence length 75 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46522316218257 35.0 31.0 35.0 15.0 35.0 2 31.418861673265035 35.0 31.0 35.0 15.0 35.0 3 31.401691504843466 35.0 31.0 35.0 15.0 35.0 4 31.57766284664746 35.0 31.0 35.0 15.0 35.0 5 31.622128310944646 35.0 31.0 35.0 15.0 35.0 6 35.244344345871504 39.0 34.0 40.0 16.0 40.0 7 35.023658352806365 39.0 34.0 40.0 16.0 40.0 8 34.91226584689241 39.0 34.0 40.0 16.0 40.0 9 34.938291899643765 39.0 34.0 40.0 16.0 40.0 10 35.0490542337628 39.0 34.0 40.0 16.0 40.0 11 35.122439370862246 39.0 34.0 40.0 16.0 40.0 12 34.6967538736283 39.0 34.0 40.0 16.0 40.0 13 34.74737823953648 39.0 34.0 40.0 16.0 40.0 14 34.70784608382344 39.0 34.0 40.0 16.0 40.0 15 34.76615371445378 39.0 34.0 40.0 16.0 40.0 16 34.90419905461517 39.0 34.0 40.0 16.0 40.0 17 34.937741399871335 39.0 34.0 40.0 16.0 40.0 18 34.994567469913214 39.0 34.0 40.0 16.0 40.0 19 35.02983166318737 39.0 34.0 40.0 16.0 40.0 20 34.9880072416783 39.0 34.0 40.0 16.0 40.0 21 35.00179262050605 39.0 34.0 40.0 16.0 40.0 22 35.05089728496394 39.0 34.0 40.0 16.0 40.0 23 35.06237937952446 39.0 34.0 40.0 16.0 40.0 24 35.08500581012462 39.0 34.0 40.0 16.0 40.0 25 35.09945907782177 39.0 34.0 40.0 16.0 40.0 26 35.10207681230543 39.0 34.0 40.0 16.0 40.0 27 35.095750938477096 39.0 34.0 40.0 16.0 40.0 28 34.96374753461707 39.0 34.0 40.0 16.0 40.0 29 35.05722527772904 39.0 34.0 40.0 16.0 40.0 30 35.0697198002775 39.0 34.0 40.0 16.0 40.0 31 35.05764228448506 39.0 34.0 40.0 16.0 40.0 32 34.99431192613895 39.0 34.0 40.0 16.0 40.0 33 34.88547019630678 39.0 34.0 40.0 16.0 40.0 34 34.91760260103726 39.0 34.0 40.0 16.0 40.0 35 34.91056645960417 39.0 34.0 40.0 16.0 40.0 36 34.92214687283074 39.0 34.0 40.0 16.0 40.0 37 34.895424537457295 39.0 34.0 40.0 16.0 40.0 38 34.91234467134019 39.0 34.0 40.0 16.0 40.0 39 34.879713892681785 39.0 34.0 40.0 16.0 40.0 40 34.79848445166578 39.0 34.0 40.0 16.0 40.0 41 34.758866690907304 39.0 34.0 40.0 16.0 40.0 42 34.77517106176531 39.0 34.0 40.0 16.0 40.0 43 34.73369838375979 39.0 34.0 40.0 16.0 40.0 44 34.61406109488006 39.0 34.0 40.0 16.0 40.0 45 34.639075991005534 39.0 34.0 40.0 16.0 40.0 46 34.61009359767493 39.0 34.0 40.0 16.0 40.0 47 34.525083125889424 39.0 34.0 40.0 16.0 40.0 48 34.562078490503346 39.0 34.0 40.0 16.0 40.0 49 34.5104311019234 39.0 34.0 40.0 16.0 40.0 50 34.410415591306254 39.0 34.0 40.0 16.0 40.0 51 34.4511644405117 39.0 34.0 40.0 16.0 40.0 52 34.480655802454066 39.0 34.0 40.0 16.0 40.0 53 34.425886372439585 39.0 34.0 40.0 16.0 40.0 54 34.45559979895528 39.0 34.0 40.0 16.0 40.0 55 34.44556154790874 39.0 34.0 40.0 16.0 40.0 56 34.38632751812327 39.0 34.0 40.0 16.0 40.0 57 34.26743439983659 39.0 34.0 40.0 16.0 40.0 58 34.28810250907541 39.0 34.0 40.0 16.0 40.0 59 34.232076125769915 39.0 34.0 40.0 16.0 40.0 60 34.205289798506065 39.0 34.0 40.0 16.0 40.0 61 34.17036675405162 39.0 34.0 40.0 16.0 40.0 62 34.126543751382606 39.0 34.0 40.0 16.0 40.0 63 34.09653113099522 39.0 34.0 40.0 16.0 40.0 64 34.072952873998695 39.0 34.0 40.0 16.0 40.0 65 33.99528367054093 39.0 34.0 40.0 16.0 40.0 66 33.95357748570353 39.0 34.0 40.0 16.0 40.0 67 33.941613968709234 39.0 34.0 40.0 16.0 40.0 68 33.89926362709425 39.0 34.0 40.0 16.0 40.0 69 33.86439991286932 39.0 34.0 40.0 16.0 40.0 70 33.75322438608045 39.0 34.0 40.0 16.0 40.0 71 33.652165934785906 39.0 34.0 40.0 16.0 40.0 72 33.62165960213148 39.0 34.0 40.0 16.0 40.0 73 33.57339954586947 39.0 34.0 40.0 16.0 40.0 74 33.52047231948142 39.0 34.0 40.0 16.0 40.0 75 33.421635785282206 39.0 34.0 40.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5484.0 3 1528.0 4 1735.0 5 1739.0 6 1658.0 7 1788.0 8 1896.0 9 2072.0 10 2265.0 11 2516.0 12 2737.0 13 3177.0 14 3664.0 15 4272.0 16 4836.0 17 5485.0 18 6600.0 19 11954.0 20 21284.0 21 29566.0 22 34295.0 23 38804.0 24 42216.0 25 45545.0 26 48969.0 27 51842.0 28 56441.0 29 60467.0 30 65321.0 31 71044.0 32 79398.0 33 87891.0 34 99945.0 35 118827.0 36 148117.0 37 204924.0 38 356569.0 39 632803.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.37634663796099 15.28377931665805 12.231371684791362 26.108502360589597 2 16.247837625027863 18.189080356015282 38.329574339506216 27.233507679450636 3 20.02912266694467 22.511626606048125 26.973217486822332 30.486033240184874 4 13.54835456084188 15.211677545288035 35.0220835590001 36.217884334869986 5 15.838289526434584 35.98441988172942 32.682862124174775 15.494428467661212 6 35.33462673233675 33.95028296281605 16.495626090722702 14.219464214124494 7 31.342931269319408 29.845309140160886 19.5016769265585 19.310082663961207 8 27.994163600565162 33.477421033583454 18.806072364233366 19.72234300161802 9 27.745103772809294 15.065089499651224 17.14211369875669 40.04769302878279 10 15.46171208395736 28.019675599256505 32.04976619651698 24.468846120269156 11 37.44101939505203 21.450590208647466 21.724865383947105 19.3835250123534 12 25.466272035882927 22.987031259402784 28.308359544581158 23.23833716013314 13 29.93591487637699 20.064847940859625 23.99395001173891 26.00528717102447 14 23.872789207322707 19.046656444915698 25.060198993589793 32.020355354171805 15 25.42791928037517 26.70936748042314 21.97706123812018 25.885652001081503 16 25.840900056533233 25.87077706496745 23.224987858492316 25.063335020007 17 24.788085133793906 25.707364661389665 24.49198490977991 25.012565295036516 18 24.801264920493253 25.670071374266108 24.782236868313166 24.746426836927473 19 25.776145348891415 25.20127780362881 24.698920274580303 24.323656572899477 20 25.885863894758344 24.768718051730875 24.8476272569855 24.497790796525283 21 26.119370726634273 24.44994520429517 24.86173937586294 24.56894469320762 22 25.788435182148046 24.337048253275665 24.66620389087645 25.20831267369984 23 25.583533996645297 24.429391517641843 24.573394460421227 25.41368002529163 24 25.215771331124554 24.44316460663634 24.783677745315664 25.55738631692344 25 25.60256204882539 24.28305774441724 24.622511414712374 25.491868792045004 26 25.369818034186075 24.81126630204003 24.71926206755679 25.099653596217102 27 25.476654826048005 24.876953341859934 24.49859599249727 25.147795839594796 28 25.590994737569915 24.708606614050847 24.406205646232014 25.29419300214722 29 25.68121698166781 24.868011428697354 24.382774908737392 25.067996680897448 30 25.606588028685316 24.74833388001902 24.49486666378491 25.150211427510747 31 25.589255125919934 24.42650976363684 24.324631283812934 25.65960382663029 32 25.426266509695832 24.75566540123763 24.50804645048426 25.31002163858228 33 25.643569519753857 24.45155034569192 24.436965440983496 25.467914693570727 34 25.768739990668198 24.65091561415501 24.478815496893002 25.10152889828379 35 25.738470653149548 24.51817496823714 24.464862519144596 25.278491859468723 36 25.58883133856626 24.767573825875946 24.38561428400703 25.257980551550762 37 25.71517324646254 24.35807842866363 24.490342517798016 25.43640580707581 38 25.63632156551633 24.661137047095 24.508275782571697 25.194265604816973 39 25.719550377425975 24.769798124142888 24.404873905990165 25.10577759244097 40 25.81297246992593 24.434137936003026 24.64264131401202 25.11024828005903 41 25.46147401307049 24.50837342726749 24.69683222251275 25.333320337149267 42 25.525245162438658 24.53730622208284 24.634396480848935 25.303052134629567 43 25.376281110256 24.373684139151543 24.64728148657949 25.60275326401296 44 25.546943203681888 24.66774874346304 24.46043074002187 25.324877312833205 45 25.51215266005777 24.663254858351756 24.39804581022254 25.426546671367934 46 25.579667674010487 24.515451518453208 24.246473343105883 25.65840746443042 47 25.44887594547039 24.686439471248548 24.414325380815637 25.450359202465428 48 25.30591141981718 24.744943148830135 24.59250657930982 25.356638852042874 49 25.74475361628497 24.366977966862358 24.339770807226255 25.54849760962642 50 25.769885522079576 24.46186308333923 24.453472075956416 25.314779318624776 51 25.422359040252786 24.751288637402883 24.39276286486672 25.433589457477613 52 25.63755710012116 24.69293388781741 24.193372720180058 25.476136291881367 53 25.40946438227751 24.7245798985281 24.412968265027114 25.452987454167282 54 25.25699271062892 24.760764536362096 24.4568994744872 25.525343278521785 55 25.50036297955999 24.42833368013809 24.35010130795542 25.7212020323465 56 25.23404845017992 24.849967855552133 24.51644537075453 25.399538323513422 57 25.62442179243392 24.525324167052666 24.331906717188005 25.518347323325408 58 25.465161762505918 24.492861904432964 24.445906046753286 25.59607028630783 59 25.573312799327702 24.70242572774163 24.4414986377292 25.282762835201467 60 25.525467746392206 24.72037775702107 24.570225952402343 25.18392854418438 61 25.67515680623835 24.441430750974742 24.486862180030514 25.3965502627564 62 25.34254325574063 24.913747033961695 24.39718277746205 25.346526932835626 63 25.22563718109161 24.625548439154773 24.54329051202911 25.605523867724507 64 25.481768405349968 24.529970673492567 24.460171890627382 25.528089030530083 65 25.573956266890885 24.554983385114028 24.388982853675003 25.482077494320087 66 25.377159784879705 24.612118104262994 24.556303795966283 25.45441831489102 67 25.560311965089337 24.468061211473188 24.32219045161028 25.649436371827193 68 25.43965227886855 24.808568599995255 24.523349799456856 25.22842932167934 69 25.490476119842597 24.622318660617605 24.377742790606018 25.509462428933777 70 25.36495994615977 24.416992219782045 24.64919515132816 25.56885268273002 71 25.494870334394527 24.474870402202402 24.530133818837704 25.50012544456537 72 25.229059200254955 24.7525058779854 24.463014037663182 25.55542088409647 73 25.425230032750424 24.49035116864096 24.479629303155026 25.604789495453588 74 25.445738955535656 24.69570325064915 24.41277645859229 25.4457813352229 75 25.356695604635444 24.716895973758763 24.43401443861259 25.492393982993207 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 121.0 1 151.0 2 218.0 3 260.0 4 265.0 5 254.5 6 243.0 7 266.0 8 290.0 9 378.0 10 537.0 11 613.5 12 619.0 13 641.5 14 723.0 15 878.0 16 974.0 17 1037.0 18 1249.5 19 1530.5 20 1662.0 21 1917.5 22 2466.0 23 3071.0 24 3383.0 25 3739.5 26 4701.5 27 5698.5 28 6090.0 29 6755.5 30 8147.5 31 9779.0 32 10684.0 33 11698.5 34 14321.0 35 17994.0 36 20059.0 37 23071.5 38 30665.5 39 41446.0 40 47645.0 41 55877.0 42 72372.5 43 89632.5 44 98629.0 45 107589.5 46 123346.5 47 136452.5 48 142762.0 49 148431.0 50 156745.5 51 160623.0 52 161855.0 53 160685.5 54 156748.5 55 148697.5 56 143414.0 57 136954.0 58 121359.0 59 101619.0 60 91014.0 61 82199.0 62 63840.0 63 46687.0 64 39078.0 65 32292.0 66 21127.0 67 14338.5 68 11929.0 69 9889.5 70 6454.0 71 4139.5 72 3221.0 73 2802.5 74 1956.5 75 1127.0 76 725.0 77 550.5 78 309.0 79 175.0 80 108.0 81 76.5 82 31.5 83 15.0 84 12.0 85 7.5 86 3.0 87 2.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.003983601124562122 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.09357224769184218 29 0.0 30 0.0 31 0.0 32 0.0 33 0.045387625578787574 34 4.2378735367682146E-5 35 0.0 36 0.0 37 4.2378735367682146E-5 38 7.628172366182786E-4 39 2.542724122060929E-4 40 0.0 41 2.96651147573775E-4 42 5.9330229514755E-4 43 8.475747073536429E-5 44 5.9330229514755E-4 45 0.0011018471195597358 46 1.2713620610304644E-4 47 8.475747073536429E-5 48 1.6951494147072858E-4 49 4.2378735367682146E-5 50 2.118936768384107E-4 51 4.661660890445036E-4 52 1.2713620610304644E-4 53 2.542724122060929E-4 54 0.003136026417208479 55 0.0015680132086042394 56 5.509235597798679E-4 57 4.661660890445036E-4 58 4.661660890445036E-4 59 4.661660890445036E-4 60 0.002627481592796293 61 0.003136026417208479 62 0.0019070430915456966 63 9.747109134566895E-4 64 0.001440877002501193 65 0.001822285620810332 66 0.0027122390635316573 67 0.0021613155037517894 68 0.003475056300149936 69 0.0033479200940468895 70 0.004237873536768215 71 0.0027969965342670216 72 9.323321780890072E-4 73 4.237873536768214E-4 74 0.0022460729744871537 75 0.0012289833256627822 >>END_MODULE >>Sequence Length Distribution pass #Length Count 75 2359674.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.38707958997188 #Duplication Level Percentage of deduplicated Percentage of total 1 80.30647644547082 52.510059669302024 2 11.09431683309964 14.508499555245017 3 3.8214930383347103 7.496288083503456 4 1.7279491242804634 4.519421876669956 5 0.8938412142251941 2.922283330766994 6 0.5345459041812842 2.097143734871707 7 0.3521004656005348 1.611597481752183 8 0.2487962915930569 1.301445033606805 9 0.17797676010002306 1.0473642520042983 >10 0.7918993688767415 8.901909003678174 >50 0.03830227399390367 1.7058910733057941 >100 0.011908540996035962 1.2229376025542644 >500 3.9373924767341335E-4 0.15515930273923667 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 4.2378735367682146E-5 3 0.0 0.0 0.0 0.0 4.2378735367682146E-5 4 0.0 0.0 0.0 0.0 4.2378735367682146E-5 5 0.0 0.0 0.0 0.0 4.2378735367682146E-5 6 0.0 0.0 0.0 0.0 1.2713620610304644E-4 7 0.0 0.0 0.0 0.0 1.2713620610304644E-4 8 0.0 0.0 0.0 0.0 1.2713620610304644E-4 9 0.0 0.0 0.0 0.0 2.1189367683841073E-4 10 0.0 0.0 0.0 0.0 2.1189367683841073E-4 11 0.0 0.0 0.0 0.0 2.1189367683841073E-4 12 0.0 0.0 0.0 0.0 2.1189367683841073E-4 13 0.0 0.0 0.0 0.0 2.1189367683841073E-4 14 0.0 0.0 0.0 0.0 2.96651147573775E-4 15 0.0 0.0 0.0 0.0 3.814086183091393E-4 16 0.0 0.0 0.0 0.0 3.814086183091393E-4 17 0.0 0.0 0.0 0.0 3.814086183091393E-4 18 0.0 0.0 0.0 0.0 4.2378735367682146E-4 19 0.0 0.0 0.0 0.0 4.2378735367682146E-4 20 0.0 0.0 0.0 0.0 4.2378735367682146E-4 21 0.0 0.0 0.0 0.0 4.661660890445036E-4 22 0.0 0.0 0.0 4.2378735367682146E-5 4.661660890445036E-4 23 0.0 0.0 0.0 4.2378735367682146E-5 5.9330229514755E-4 24 0.0 0.0 0.0 4.2378735367682146E-5 5.9330229514755E-4 25 0.0 0.0 0.0 4.2378735367682146E-5 5.9330229514755E-4 26 0.0 0.0 0.0 1.2713620610304644E-4 5.9330229514755E-4 27 0.0 0.0 0.0 2.542724122060929E-4 5.9330229514755E-4 28 0.0 0.0 0.0 7.204385012505965E-4 5.9330229514755E-4 29 0.0 0.0 0.0 0.001483255737868875 5.9330229514755E-4 30 0.0 0.0 0.0 0.0028393752696347038 5.9330229514755E-4 31 0.0 0.0 0.0 0.006483946511255369 6.780597658829143E-4 32 0.0 0.0 0.0 0.01084895625412663 6.780597658829143E-4 33 0.0 0.0 0.0 0.015425859673836301 6.780597658829143E-4 34 0.0 0.0 0.0 0.01957897573986915 6.780597658829143E-4 35 0.0 0.0 0.0 0.024537287777887964 7.204385012505965E-4 36 0.0 0.0 0.0 0.03140264290745247 7.204385012505965E-4 37 0.0 0.0 0.0 0.040429313540768765 7.204385012505965E-4 38 0.0 0.0 0.0 0.05348196403401487 7.204385012505965E-4 39 0.0 0.0 0.0 0.06920447485542494 7.628172366182786E-4 40 0.0 0.0 0.0 0.0847574707353643 7.628172366182786E-4 41 0.0 0.0 0.0 0.10094614764581887 7.628172366182786E-4 42 0.0 0.0 0.0 0.12027085097348193 7.628172366182786E-4 43 0.0 0.0 0.0 0.13895987327062975 7.628172366182786E-4 44 4.2378735367682146E-5 0.0 0.0 0.15896263636417574 7.628172366182786E-4 45 4.2378735367682146E-5 0.0 0.0 0.17930442934066315 8.051959719859608E-4 46 4.2378735367682146E-5 0.0 0.0 0.2005785544952396 8.051959719859608E-4 47 4.2378735367682146E-5 0.0 0.0 0.2247768123901861 8.051959719859608E-4 48 4.2378735367682146E-5 0.0 0.0 0.24889031281439725 9.747109134566894E-4 49 4.2378735367682146E-5 0.0 0.0 0.2745718264472126 9.747109134566894E-4 50 4.2378735367682146E-5 0.0 0.0 0.3036012601740749 9.747109134566894E-4 51 4.2378735367682146E-5 0.0 0.0 0.33144408931064206 9.747109134566894E-4 52 4.2378735367682146E-5 0.0 0.0 0.3596683270655184 9.747109134566894E-4 53 4.2378735367682146E-5 0.0 0.0 0.3914947573266477 0.0012713620610304644 54 4.2378735367682146E-5 0.0 0.0 0.42378735367682147 0.0012713620610304644 55 4.2378735367682146E-5 0.0 0.0 0.4555290264672154 0.0012713620610304644 56 4.2378735367682146E-5 0.0 0.0 0.4914661940590098 0.0012713620610304644 57 4.2378735367682146E-5 0.0 0.0 0.5274881191215397 0.0013561195317658287 58 4.2378735367682146E-5 0.0 0.0 0.5661799045122334 0.0013561195317658287 59 4.2378735367682146E-5 0.0 0.0 0.6079229588494004 0.0013984982671335108 60 4.2378735367682146E-5 0.0 0.0 0.648776059743846 0.0013984982671335108 61 4.2378735367682146E-5 0.0 0.0 0.6921718847603525 0.0013984982671335108 62 4.2378735367682146E-5 0.0 0.0 0.7367119356317864 0.001483255737868875 63 4.2378735367682146E-5 0.0 0.0 0.7850236939509441 0.001483255737868875 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2330 0.0 41.45453 1 TCAACGC 3085 0.0 30.302242 4 CAACGCA 3125 0.0 30.02476 5 TATCAAC 3235 0.0 29.323723 2 ATCAACG 3145 0.0 29.285408 3 AACGCAG 3385 0.0 27.718576 6 GGTATCA 1215 0.0 25.552658 1 ACGCAGA 3935 0.0 23.230675 7 GTATATA 450 0.0 21.464233 1 CGCAGAG 4095 0.0 21.396389 8 GTACATG 6065 0.0 21.215237 1 TACATGG 6205 0.0 20.235796 2 AGAGTAC 4110 0.0 19.303972 11 ACATGGG 6545 0.0 18.710241 3 GTACTAA 375 0.0 18.397915 1 CTAATAC 325 0.0 18.043726 3 CGTGCCG 440 0.0 18.031666 10 CATGGGG 5340 0.0 17.958258 4 CAGAGTA 4635 0.0 17.638405 10 CGGTATG 350 1.8189894E-12 16.754889 59 >>END_MODULE