##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3203959_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2992164 Sequences flagged as poor quality 0 Sequence length 75 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07305916386936 35.0 31.0 35.0 15.0 35.0 2 31.037615919448264 35.0 31.0 35.0 15.0 35.0 3 30.93157326937962 35.0 31.0 35.0 15.0 35.0 4 31.34373750904028 35.0 31.0 35.0 15.0 35.0 5 31.223596367044053 35.0 31.0 35.0 15.0 35.0 6 34.780376677214214 39.0 34.0 40.0 16.0 40.0 7 34.42252396593235 39.0 34.0 40.0 16.0 40.0 8 34.43199804556168 39.0 34.0 40.0 16.0 40.0 9 34.4388506111296 39.0 34.0 40.0 16.0 40.0 10 34.54008069076428 39.0 34.0 40.0 16.0 40.0 11 34.59460143227444 39.0 34.0 40.0 16.0 40.0 12 34.193106728107146 39.0 31.0 40.0 16.0 40.0 13 34.24654297023826 39.0 34.0 40.0 16.0 40.0 14 34.214750261015105 39.0 31.0 40.0 16.0 40.0 15 34.278132147836814 39.0 34.0 40.0 16.0 40.0 16 34.414879665686776 39.0 34.0 40.0 16.0 40.0 17 34.45477320093417 39.0 34.0 40.0 16.0 40.0 18 34.50013735878114 39.0 34.0 40.0 16.0 40.0 19 34.53564477080802 39.0 34.0 40.0 16.0 40.0 20 34.500738595879106 39.0 34.0 40.0 16.0 40.0 21 34.515939300118575 39.0 34.0 40.0 16.0 40.0 22 34.569243530769036 39.0 34.0 40.0 16.0 40.0 23 34.57184933713526 39.0 34.0 40.0 16.0 40.0 24 34.596531139335944 39.0 34.0 40.0 16.0 40.0 25 34.61746949699281 39.0 34.0 40.0 16.0 40.0 26 34.626396146735274 39.0 34.0 40.0 16.0 40.0 27 34.62019361238221 39.0 34.0 40.0 16.0 40.0 28 34.49237575213123 39.0 34.0 40.0 16.0 40.0 29 34.57470312456135 39.0 34.0 40.0 16.0 40.0 30 34.59493363331689 39.0 34.0 40.0 16.0 40.0 31 34.58507053757749 39.0 34.0 40.0 16.0 40.0 32 34.52594543614588 39.0 34.0 40.0 16.0 40.0 33 34.414302157234694 39.0 34.0 40.0 16.0 40.0 34 34.442637836696115 39.0 34.0 40.0 16.0 40.0 35 34.430874109841575 39.0 34.0 40.0 16.0 40.0 36 34.43514827395825 39.0 34.0 40.0 16.0 40.0 37 34.40136336109919 39.0 34.0 40.0 16.0 40.0 38 34.41581076438324 39.0 34.0 40.0 16.0 40.0 39 34.3788909966165 39.0 34.0 40.0 16.0 40.0 40 34.3054588585385 39.0 34.0 40.0 16.0 40.0 41 34.27063957724243 39.0 34.0 40.0 16.0 40.0 42 34.272305929755184 39.0 34.0 40.0 16.0 40.0 43 34.18956213630002 39.0 34.0 40.0 16.0 40.0 44 34.05699186274549 39.0 34.0 40.0 16.0 40.0 45 34.06249390073539 39.0 34.0 40.0 16.0 40.0 46 34.02240151275131 39.0 34.0 40.0 16.0 40.0 47 33.949626424220064 39.0 31.0 40.0 16.0 40.0 48 33.970996910597144 39.0 31.0 40.0 16.0 40.0 49 33.92476816110347 39.0 31.0 40.0 16.0 40.0 50 33.823129347188186 39.0 31.0 40.0 16.0 40.0 51 33.8542279099675 39.0 31.0 40.0 16.0 40.0 52 33.87605960101117 39.0 31.0 40.0 16.0 40.0 53 33.82147368927639 39.0 31.0 40.0 16.0 40.0 54 33.84392366193832 39.0 31.0 40.0 16.0 40.0 55 33.82982015691653 39.0 31.0 40.0 16.0 40.0 56 33.76958415380975 39.0 31.0 40.0 16.0 40.0 57 33.652843226507635 38.0 31.0 40.0 16.0 40.0 58 33.67055415411722 38.0 31.0 40.0 16.0 40.0 59 33.60948664578546 38.0 31.0 40.0 16.0 40.0 60 33.56976188470953 38.0 31.0 40.0 16.0 40.0 61 33.53828232677086 38.0 31.0 40.0 16.0 40.0 62 33.48530695510006 38.0 31.0 40.0 16.0 40.0 63 33.445655050993196 38.0 31.0 40.0 16.0 40.0 64 33.42935246864811 38.0 31.0 40.0 16.0 40.0 65 33.3440316105668 38.0 31.0 40.0 16.0 40.0 66 33.29829247327353 38.0 31.0 39.0 16.0 40.0 67 33.282107865745324 38.0 31.0 39.0 16.0 40.0 68 33.23885288373231 38.0 31.0 39.0 16.0 40.0 69 33.19583117770283 38.0 31.0 39.0 16.0 40.0 70 33.086687093354506 38.0 31.0 39.0 16.0 40.0 71 32.980848309116745 38.0 30.0 39.0 16.0 40.0 72 32.94390414429156 38.0 30.0 39.0 16.0 40.0 73 32.88803922512269 38.0 30.0 39.0 16.0 40.0 74 32.83599862841743 38.0 30.0 39.0 16.0 40.0 75 32.72510631101771 38.0 30.0 39.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 9111.0 3 2393.0 4 2639.0 5 2574.0 6 2502.0 7 2579.0 8 2740.0 9 3105.0 10 3284.0 11 3671.0 12 4102.0 13 4598.0 14 5215.0 15 5909.0 16 6799.0 17 7611.0 18 9465.0 19 17873.0 20 33288.0 21 45436.0 22 51893.0 23 57193.0 24 61734.0 25 65127.0 26 69167.0 27 73535.0 28 77480.0 29 82231.0 30 88831.0 31 96698.0 32 104865.0 33 115781.0 34 130610.0 35 151905.0 36 188672.0 37 259623.0 38 452984.0 39 688941.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.52514321236873 17.50228939259239 12.830625054310406 25.141942340728463 2 15.231183852222005 20.12931109391063 39.492320608095014 25.147184445772357 3 18.909558433294432 25.415518668094393 28.437746059373755 27.23717683923742 4 12.406706316899742 16.136080776321084 37.44126324626592 34.015949660513265 5 13.939042111328122 38.129895286488306 33.76435917282608 14.166703429357483 6 32.1963969889351 36.88664792437847 17.595158554143424 13.321796532543 7 28.674464367594826 31.899120502753192 21.489530654068425 17.936884475583557 8 27.048617655984096 34.79886129236232 19.712121394415547 18.44039965723804 9 27.214116605907968 15.750339887786899 18.50643881819312 38.529104688112014 10 14.327022181939226 29.483477509922583 33.4634732588187 22.726027049319487 11 35.555370628080546 23.08386171346223 23.4161630178025 17.944604640654724 12 24.08374006237626 24.64694448566322 29.871724945557798 21.397590506402725 13 28.148924992079312 22.053269807403606 25.651635405011223 24.146169795505863 14 22.48382775810417 20.58663896765017 26.853875656548237 30.075657617697427 15 23.667252196069466 28.936214726198163 23.31406299922063 24.08247007851174 16 23.87626480366718 28.050902290115115 24.594206734657593 23.478626171560116 17 22.834878034760127 27.824577797206302 26.213803788829757 23.126740379203813 18 22.95469098618926 27.5616911372505 26.745893607435956 22.737724269124286 19 23.95276462119055 26.96613554604627 26.672669011457927 22.40843082130525 20 24.144866391013327 26.473147862216106 26.55496155959366 22.827024187176907 21 24.21832493138745 26.324359226299094 26.51936859075906 22.937947251554395 22 23.908615971584446 26.21691190723503 26.482572479315973 23.39189964186455 23 23.635569440712477 26.408077899473426 26.484577716996792 23.471774942817305 24 23.302733406323988 26.36456424179958 26.602987002049357 23.72971534982708 25 23.598539384873288 26.265104452830794 26.54904610843523 23.587310053860683 26 23.44991785209634 26.553925520125233 26.55419288514934 23.441963742629078 27 23.544097181838964 26.700341291453277 26.274194863650525 23.481366663057237 28 23.71800254029465 26.509449835871006 26.36400341605069 23.408544207783656 29 23.801536279428532 26.629322456924154 26.25400880433024 23.31513245931707 30 23.707356949685913 26.60151649441675 26.255445891334833 23.435680664562504 31 23.67784653514981 26.23455799882627 26.41452808068007 23.673067385343852 32 23.4629853176497 26.577019174082707 26.345113436295602 23.61488207197199 33 23.477382767568145 26.54846454270658 26.311391541609826 23.662761148115454 34 23.878437144488068 26.481369336707477 26.317975886348478 23.322217632455974 35 23.862462084297515 26.52956188230324 26.281614243069562 23.326361790329674 36 23.852034848357242 26.49634177805762 26.169454615455567 23.482168758129568 37 23.780113656871748 26.220454493804485 26.42502215787637 23.574409691447393 38 23.791589478141514 26.35430978502627 26.301036752042773 23.553063984789446 39 23.87601837205517 26.610938678603667 26.114573686572847 23.398469262768316 40 23.833954288601827 26.358013798708896 26.480533821007135 23.32749809168214 41 23.57930514731071 26.378066570971658 26.42321812612691 23.61941015559072 42 23.675655659275417 26.481539472905858 26.19836431505066 23.644440552768067 43 23.547637826854178 26.10859713384311 26.62665098123095 23.71711405807176 44 23.63800368430481 26.378238806049957 26.3677112660052 23.616046243640028 45 23.700143509423697 26.55475783536722 26.15490996738787 23.590188687821218 46 23.81878928387257 26.30321275946531 26.152986986337307 23.72501097032481 47 23.71743241174776 26.522227071929926 26.159245388451563 23.60109512787075 48 23.550513942417595 26.665750941459095 26.13950973275529 23.644225383368024 49 23.714683992817235 26.308058752146856 26.169730726568037 23.807526528467868 50 23.830034546937814 26.544694620376376 26.154107349170047 23.47116348351576 51 23.78521889320835 26.539899149238806 25.965494976177617 23.70938698137523 52 23.92096417239441 26.414412053892804 25.88559710336539 23.779026670347395 53 23.810222461663095 26.49698077239288 26.128784729138456 23.56401203680557 54 23.62047010932231 26.501986918755243 26.19781622756152 23.679726744360927 55 23.510436419954026 26.37282353169227 26.268984044078476 23.847756004275233 56 23.54299827381937 26.6981489929499 26.102524768937442 23.656327964293293 57 23.74085067003458 26.457517799020707 26.0594440335557 23.742187497389008 58 23.751599185601783 26.348830338606245 26.230052791506303 23.669517684285672 59 23.7090097024171 26.56121486253489 26.05525608585959 23.674519349188426 60 23.582282698897522 26.66264716764018 26.281775125740246 23.47329500772205 61 23.86380992773262 26.388038032367415 26.224473051048385 23.52367898885158 62 23.770271277425945 26.531239064965344 26.13496259988376 23.56352705772495 63 23.60100730749114 26.518622989938624 26.186986883947416 23.693382818622823 64 23.594582969460774 26.46104650249539 26.173825305744856 23.77054522229898 65 23.670304585917226 26.46419983322722 26.066084131686996 23.79941144916856 66 23.569725983628803 26.646544682569072 26.13165272097976 23.652076612822366 67 23.729737461807733 26.45150660172227 26.06151269109501 23.757243245374983 68 23.705977880695055 26.484042530080576 26.373482769488582 23.436496819735787 69 23.6791374504522 26.469489248210266 26.07113493713361 23.780238364203925 70 23.475165690183587 26.17146218453692 26.426840639966848 23.926531485312648 71 23.633136335942105 26.282090059547063 26.21875633963852 23.866017264872312 72 23.517710538760657 26.56843167694079 26.122330301506107 23.791527482792446 73 23.6194041074144 26.350216399578898 26.125728990859415 23.904650502147284 74 23.50683666075778 26.510776363388437 26.062763861149215 23.91962311470457 75 23.589878474044138 26.43732633539185 26.25498058565872 23.71781460490529 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 196.0 1 271.0 2 420.5 3 501.0 4 507.0 5 476.5 6 442.0 7 465.0 8 492.0 9 610.5 10 856.0 11 1009.0 12 1035.0 13 1104.0 14 1228.0 15 1396.5 16 1510.0 17 1705.5 18 2218.5 19 2997.5 20 3459.0 21 4180.0 22 6587.5 23 9703.5 24 11133.0 25 13289.5 26 18708.5 27 24403.5 28 26836.0 29 31291.5 30 39498.5 31 47835.0 32 52420.0 33 56738.5 34 66248.5 35 76782.0 36 82124.0 37 86359.0 38 93448.0 39 100495.0 40 104688.0 41 109775.0 42 119295.5 43 127267.0 44 130805.0 45 135190.5 46 143077.5 47 149357.0 48 152135.0 49 154251.0 50 156430.0 51 155327.0 52 154161.0 53 151542.0 54 146826.0 55 139682.0 56 134635.0 57 129425.5 58 114807.0 59 94727.5 60 84057.0 61 76403.0 62 60158.0 63 44385.0 64 37203.0 65 30856.5 66 20562.5 67 14158.5 68 11702.0 69 9863.0 70 6530.5 71 3970.0 72 2903.0 73 2636.0 74 1973.5 75 1166.0 76 754.0 77 578.0 78 297.0 79 141.5 80 91.0 81 68.0 82 30.5 83 13.0 84 10.0 85 9.0 86 6.5 87 3.5 88 2.0 89 2.0 90 1.5 91 0.5 92 0.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.003475745313425334 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.091806465153648 29 0.0 30 0.0 31 0.0 32 0.0 33 0.050933037092886616 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0010360394684248591 39 3.6762690815075644E-4 40 0.0 41 6.349919322603975E-4 42 7.686744443152181E-4 43 1.336825120548205E-4 44 4.0104753616446154E-4 45 8.689363283563335E-4 46 3.342062801370513E-5 47 6.684125602741026E-5 48 0.0 49 3.342062801370513E-5 50 1.0026188404111539E-4 51 6.684125602741027E-4 52 6.684125602741026E-5 53 2.67365024109641E-4 54 0.003141539033288282 55 0.0015373488886304362 56 3.007856521233462E-4 57 1.6710314006852567E-4 58 5.34730048219282E-4 59 7.686744443152181E-4 60 0.002773912125137526 61 0.0027070708691101157 62 0.0020386583088360132 63 9.691982123974489E-4 64 0.0015039282606167307 65 0.002306023332945654 66 0.0026736502410964107 67 0.0022057614489045386 68 0.0039102134776035 69 0.003475745313425334 70 0.004478364153836487 71 0.0025733883570552953 72 6.349919322603975E-4 73 4.678887921918718E-4 74 0.002005237680822308 75 0.0015373488886304362 >>END_MODULE >>Sequence Length Distribution pass #Length Count 75 2992164.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.774582577154156 #Duplication Level Percentage of deduplicated Percentage of total 1 76.99058263348383 44.48098774021422 2 11.408148029300552 13.182019807424464 3 4.592505564116508 7.959902758502674 4 2.298693091325471 5.312241352972687 5 1.2985414119433776 3.7511344017088506 6 0.8100082053657972 2.8078731569447215 7 0.5572312526181713 2.253566211327171 8 0.3717503148765036 1.7182175411932492 9 0.2739976407916479 1.4247089391476235 >10 1.3273621781308453 13.074950815668018 >50 0.05289534933897118 2.057022418567116 >100 0.017635642860346433 1.7434467778047131 >500 6.48685848060292E-4 0.23392807852446548 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 3.342062801370513E-5 13 0.0 0.0 0.0 0.0 6.684125602741026E-5 14 0.0 0.0 0.0 3.342062801370513E-5 6.684125602741026E-5 15 0.0 0.0 0.0 3.342062801370513E-5 1.002618840411154E-4 16 0.0 0.0 0.0 3.342062801370513E-5 1.002618840411154E-4 17 0.0 0.0 0.0 3.342062801370513E-5 1.002618840411154E-4 18 0.0 0.0 0.0 3.342062801370513E-5 1.002618840411154E-4 19 0.0 0.0 0.0 3.342062801370513E-5 1.002618840411154E-4 20 0.0 0.0 0.0 3.342062801370513E-5 1.336825120548205E-4 21 0.0 0.0 0.0 3.342062801370513E-5 1.6710314006852567E-4 22 0.0 0.0 0.0 3.342062801370513E-5 1.6710314006852567E-4 23 0.0 0.0 0.0 1.6710314006852567E-4 1.6710314006852567E-4 24 0.0 0.0 0.0 3.3420628013705134E-4 1.6710314006852567E-4 25 0.0 3.342062801370513E-5 0.0 3.6762690815075644E-4 1.6710314006852567E-4 26 0.0 3.342062801370513E-5 0.0 4.010475361644616E-4 1.6710314006852567E-4 27 0.0 3.342062801370513E-5 0.0 4.010475361644616E-4 1.6710314006852567E-4 28 0.0 3.342062801370513E-5 0.0 7.352538163015129E-4 1.6710314006852567E-4 29 0.0 3.342062801370513E-5 0.0 0.0014705076326030258 1.6710314006852567E-4 30 0.0 3.342062801370513E-5 0.0 0.002306023332945654 1.6710314006852567E-4 31 0.0 3.342062801370513E-5 0.0 0.005614665506302462 1.6710314006852567E-4 32 0.0 3.342062801370513E-5 0.0 0.009458037727878552 1.6710314006852567E-4 33 0.0 3.342062801370513E-5 0.0 0.013067465553358706 1.6710314006852567E-4 34 0.0 3.342062801370513E-5 0.0 0.01701109965897591 1.6710314006852567E-4 35 0.0 3.342062801370513E-5 0.0 0.022358400141168733 1.6710314006852567E-4 36 0.0 6.684125602741026E-5 0.0 0.028908843231854938 1.6710314006852567E-4 37 0.0 6.684125602741026E-5 0.0 0.03796583342356903 2.005237680822308E-4 38 0.0 6.684125602741026E-5 0.0 0.04983015636843435 2.005237680822308E-4 39 0.0 6.684125602741026E-5 0.0 0.06453523269446461 2.005237680822308E-4 40 0.0 6.684125602741026E-5 0.0 0.07756927761980961 2.005237680822308E-4 41 0.0 6.684125602741026E-5 0.0 0.0918733064096754 2.005237680822308E-4 42 0.0 6.684125602741026E-5 0.0 0.10667864461974678 2.005237680822308E-4 43 0.0 6.684125602741026E-5 0.0 0.12335553799858565 2.005237680822308E-4 44 0.0 6.684125602741026E-5 0.0 0.1407008439376986 2.005237680822308E-4 45 0.0 6.684125602741026E-5 0.0 0.15704353103640042 2.005237680822308E-4 46 0.0 6.684125602741026E-5 0.0 0.17682854282051386 2.005237680822308E-4 47 0.0 6.684125602741026E-5 0.0 0.1966803958606547 2.005237680822308E-4 48 0.0 6.684125602741026E-5 0.0 0.21850406595360414 2.005237680822308E-4 49 0.0 6.684125602741026E-5 0.0 0.2395924822302521 2.005237680822308E-4 50 0.0 6.684125602741026E-5 0.0 0.26235192990758527 2.3394439609593593E-4 51 0.0 6.684125602741026E-5 0.0 0.2880523928501245 2.3394439609593593E-4 52 0.0 6.684125602741026E-5 0.0 0.31308444323238965 2.3394439609593593E-4 53 0.0 6.684125602741026E-5 0.0 0.33774886670650406 2.3394439609593593E-4 54 0.0 6.684125602741026E-5 0.0 0.36381695655719404 2.3394439609593593E-4 55 0.0 6.684125602741026E-5 0.0 0.3905534589681582 2.3394439609593593E-4 56 0.0 6.684125602741026E-5 0.0 0.42029781790035575 2.3394439609593593E-4 57 0.0 6.684125602741026E-5 0.0 0.45061032750878627 2.3394439609593593E-4 58 0.0 6.684125602741026E-5 0.0 0.4839975348944777 2.3394439609593593E-4 59 0.0 6.684125602741026E-5 0.0 0.5179528929564021 2.3394439609593593E-4 60 0.0 6.684125602741026E-5 0.0 0.5527771873466829 2.3394439609593593E-4 61 0.0 6.684125602741026E-5 0.0 0.5881362117851829 2.3394439609593593E-4 62 0.0 6.684125602741026E-5 0.0 0.6293104254980676 2.3394439609593593E-4 63 0.0 6.684125602741026E-5 0.0 0.6681451952499929 2.3394439609593593E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3735 0.0 41.00714 1 GGTATCA 1475 0.0 32.97571 1 TCAACGC 4890 0.0 29.838491 4 ATCAACG 4905 0.0 29.817566 3 TATCAAC 5080 0.0 29.537306 2 CAACGCA 5040 0.0 28.74512 5 AACGCAG 5300 0.0 27.269897 6 GTACATG 9600 0.0 22.889448 1 ACGCAGA 6230 0.0 22.534697 7 TACATGG 9720 0.0 21.64756 2 CGCAGAG 6500 0.0 21.492504 8 ACATGGG 9760 0.0 20.145145 3 AGAGTAC 6560 0.0 19.876198 11 CAGAGTA 7390 0.0 18.157269 10 CATGGGG 6165 0.0 18.128307 4 GCAGAGT 7500 0.0 17.844969 9 ATACCGT 295 2.910383E-11 17.539394 6 GAGTACT 2715 0.0 16.643583 12 GAGTACA 6560 0.0 15.775552 1 GGACCGT 350 2.1827873E-11 15.768751 6 >>END_MODULE