##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3203956_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1113724 Sequences flagged as poor quality 0 Sequence length 75 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.95775703854815 35.0 31.0 35.0 15.0 35.0 2 31.218917792918173 35.0 31.0 35.0 15.0 35.0 3 31.346371273313675 35.0 31.0 35.0 15.0 35.0 4 31.331410654704396 35.0 31.0 35.0 15.0 35.0 5 31.656416670557515 35.0 31.0 35.0 15.0 35.0 6 35.05690727684777 39.0 34.0 40.0 16.0 40.0 7 34.81394223344383 39.0 34.0 40.0 16.0 40.0 8 34.83818612151664 39.0 34.0 40.0 16.0 40.0 9 34.62978529689582 39.0 34.0 40.0 16.0 40.0 10 34.84873451591238 39.0 34.0 40.0 16.0 40.0 11 34.85455552722218 39.0 34.0 40.0 16.0 40.0 12 34.48161124300096 39.0 34.0 40.0 16.0 40.0 13 34.50292711659262 39.0 34.0 40.0 16.0 40.0 14 34.49650541785936 39.0 34.0 40.0 16.0 40.0 15 34.62630508097159 39.0 34.0 40.0 16.0 40.0 16 34.8058917649256 39.0 34.0 40.0 16.0 40.0 17 34.876868057076976 39.0 34.0 40.0 16.0 40.0 18 34.950345866659966 39.0 34.0 40.0 16.0 40.0 19 35.00806663051169 39.0 34.0 40.0 16.0 40.0 20 34.98238073346718 39.0 34.0 40.0 16.0 40.0 21 35.045153916051014 39.0 34.0 40.0 16.0 40.0 22 35.137086926383915 39.0 34.0 40.0 16.0 40.0 23 35.201801343959545 39.0 34.0 40.0 16.0 40.0 24 35.30166270997123 39.0 35.0 40.0 16.0 40.0 25 35.341794735499995 39.0 35.0 40.0 16.0 40.0 26 35.395822483846985 39.0 35.0 40.0 27.0 40.0 27 35.43423146129562 39.0 35.0 40.0 27.0 40.0 28 35.31982430117336 39.0 35.0 40.0 16.0 40.0 29 35.43256677596963 39.0 35.0 40.0 27.0 40.0 30 35.444378499520525 39.0 35.0 40.0 27.0 40.0 31 35.450211183381164 39.0 35.0 40.0 27.0 40.0 32 35.39071888546893 39.0 35.0 40.0 27.0 40.0 33 35.27481853672903 39.0 35.0 40.0 16.0 40.0 34 35.310077721230755 39.0 35.0 40.0 16.0 40.0 35 35.30146607238418 39.0 35.0 40.0 16.0 40.0 36 35.30256957738183 39.0 35.0 40.0 16.0 40.0 37 35.26153337810804 39.0 35.0 40.0 16.0 40.0 38 35.249136231238616 39.0 35.0 40.0 16.0 40.0 39 35.193635047821545 39.0 35.0 40.0 16.0 40.0 40 35.126465803017624 39.0 35.0 40.0 16.0 40.0 41 35.07028581587539 39.0 34.0 40.0 16.0 40.0 42 35.056728597031224 39.0 34.0 40.0 16.0 40.0 43 34.99526363802881 39.0 34.0 40.0 16.0 40.0 44 34.871744705151364 39.0 34.0 40.0 16.0 40.0 45 34.86450502997152 39.0 34.0 40.0 16.0 40.0 46 34.80826578218661 39.0 34.0 40.0 16.0 40.0 47 34.710237904543675 39.0 34.0 40.0 16.0 40.0 48 34.715933211459934 39.0 34.0 40.0 16.0 40.0 49 34.66362132808487 39.0 34.0 40.0 16.0 40.0 50 34.559106205846334 39.0 34.0 40.0 16.0 40.0 51 34.59613423074298 39.0 34.0 40.0 16.0 40.0 52 34.64069464247875 39.0 34.0 40.0 16.0 40.0 53 34.56818834828018 39.0 34.0 40.0 16.0 40.0 54 34.61633402889765 39.0 34.0 40.0 16.0 40.0 55 34.607875021100384 39.0 34.0 40.0 16.0 40.0 56 34.56922271586138 39.0 34.0 40.0 16.0 40.0 57 34.44454281312066 39.0 34.0 40.0 16.0 40.0 58 34.48291138558566 39.0 34.0 40.0 16.0 40.0 59 34.42596819319688 39.0 34.0 40.0 16.0 40.0 60 34.400377472336054 39.0 34.0 40.0 16.0 40.0 61 34.370651076927494 39.0 34.0 40.0 16.0 40.0 62 34.336894957817194 39.0 34.0 40.0 16.0 40.0 63 34.2895026056725 39.0 34.0 40.0 16.0 40.0 64 34.28795733952038 39.0 34.0 40.0 16.0 40.0 65 34.19957278463964 39.0 34.0 40.0 16.0 40.0 66 34.16024975667221 39.0 34.0 40.0 16.0 40.0 67 34.14395756937984 39.0 34.0 40.0 16.0 40.0 68 34.11426080429263 39.0 34.0 40.0 16.0 40.0 69 34.080474156972464 39.0 34.0 40.0 16.0 40.0 70 33.95412597735166 39.0 34.0 40.0 16.0 40.0 71 33.848888054850214 39.0 34.0 40.0 16.0 40.0 72 33.82588415083091 39.0 34.0 40.0 16.0 40.0 73 33.77471258588304 39.0 34.0 40.0 16.0 40.0 74 33.748104557322996 39.0 34.0 40.0 16.0 40.0 75 33.65541193329766 39.0 34.0 40.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5854.0 3 900.0 4 953.0 5 941.0 6 851.0 7 912.0 8 1098.0 9 1069.0 10 1120.0 11 1155.0 12 1296.0 13 1476.0 14 1740.0 15 1885.0 16 2221.0 17 2497.0 18 3066.0 19 5593.0 20 9719.0 21 12380.0 22 13575.0 23 15445.0 24 17229.0 25 18867.0 26 20603.0 27 22524.0 28 25254.0 29 27540.0 30 30976.0 31 34952.0 32 38565.0 33 42441.0 34 46714.0 35 53135.0 36 66654.0 37 93377.0 38 167282.0 39 321865.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.72744504875327 20.117916544323315 13.624245624148648 22.530392782774776 2 14.19759294044126 22.178295520254572 41.06951093807801 22.554600601226156 3 17.07613376384095 30.25632921621515 28.78747337760522 23.880063642338676 4 11.085690889304711 18.25111068810585 39.64528015917767 31.017918263411758 5 11.73692943673657 41.73906641142689 33.77596244671032 12.748041705126226 6 27.40274969382001 41.57574048866685 18.557200886395552 12.464308931117584 7 26.652743408600337 35.24643448466586 22.476214932963643 15.62460717377016 8 25.637590641846636 36.50563335260801 20.34058707543341 17.516188930111948 9 27.22945720842866 17.87166299729556 19.137147084915114 35.761732709360665 10 13.291264262959226 32.81998053377677 32.89935387941716 20.98940132384684 11 32.10562042301324 26.885296536664384 24.02157087393286 16.987512166389518 12 22.493274814945174 28.676853511282868 29.862515308999356 18.9673563647726 13 26.55945279081711 25.407372023948483 26.31028872503421 21.722886460200193 14 21.65725080899756 23.700036993007245 28.03019419533026 26.61251800266493 15 21.888187737715985 31.82081018277419 24.671283010871633 21.61971906863819 16 21.437537486845933 31.203422032747792 25.779187662293353 21.579852818112926 17 20.226106288452076 31.151883231393057 26.839504221871845 21.78250625828302 18 20.371564229557773 30.231637281768194 28.902492897701766 20.49430559097227 19 22.16491698122695 29.21379084943846 28.937690127895245 19.68360204143935 20 22.736602605313344 28.366453448071518 28.419967604182006 20.476976342433133 21 23.049606545248196 28.458576810771792 27.93088772442724 20.56092891955278 22 22.123614109061133 28.591105157112533 28.354780897242044 20.93049983658429 23 21.699361780836185 28.882380194734065 28.386745728744284 21.031512295685467 24 21.345593701850728 28.588860435799173 28.800133605812572 21.265412256537527 25 21.789330211075633 28.35181786510841 28.52322478459654 21.33562713921941 26 21.25544569390621 28.67918802144876 28.68511408571603 21.380252198928996 27 21.26711824473568 29.07955651489956 28.21632648663403 21.436998753730727 28 21.258976317799846 28.495933132611334 28.69249090010336 21.55259964948546 29 21.36453914973548 28.914614392793908 28.644888679780628 21.075957777689986 30 21.655544820799406 28.818091376319448 28.289773768007155 21.236590034873988 31 21.73635478808035 28.24927899551415 28.830212871411586 21.184153344993913 32 21.30626618444067 28.929698920019682 28.199087026947428 21.564947868592217 33 21.117871241673868 28.710709735845803 28.441901708979373 21.729517313500953 34 21.852471395490618 28.339632026994146 28.65631759423124 21.151578983283994 35 21.64369269226487 28.68349788637041 28.41978802647694 21.25302139488778 36 21.53711332430656 28.617054135494968 28.15087041313647 21.694962127062002 37 21.694802028870733 28.26411953421093 28.568593806538967 21.47248463037937 38 21.519489708327797 28.54892988876877 28.480959239159713 21.45062116374372 39 21.86373427456248 28.72469855556284 28.10982283713785 21.301744332736835 40 21.782596047135556 28.28447622570763 28.88408618293222 21.0488415442246 41 21.28208627693236 28.4716211314195 28.741707939905687 21.504584651742455 42 21.579405769904195 28.60511264153146 28.09492596816047 21.720555620403875 43 20.99371118876849 28.060453038634346 28.89360380130086 22.052231971296298 44 21.02930995935233 28.6922979536094 28.402996452420137 21.87539563461813 45 21.388781639744636 28.478239398047968 28.40874195257293 21.724237009634464 46 21.41347407436672 28.260682179786016 28.330358329352695 21.99548541649457 47 21.436549809468055 28.89153865769257 28.15850246560189 21.513409067237486 48 21.133262040920407 29.14863031471919 27.91690572970119 21.80120191465921 49 21.490872065251352 28.68349788637041 27.774026599049673 22.051603449328557 50 21.697226330065913 28.611961861252755 27.86563624886978 21.82517555981155 51 21.988988176476504 28.858897093683105 27.43707529415145 21.71503943568894 52 21.8036849477427 28.774647128542185 27.467496318643825 21.954171605071295 53 21.553224233695662 28.77190178518517 27.935427332853262 21.739446648265908 54 21.480631452104586 29.041912135097203 27.827657142446665 21.649799270351544 55 21.326851658968632 28.547262109142107 27.955183783123704 22.17070244876556 56 21.605539637915847 29.049966822870044 27.72440804188489 21.62008549732922 57 21.436216349201505 28.792477090250852 27.57331748252251 22.197989078025138 58 21.204385690029657 28.321659170719926 28.290232761941365 22.183722377309056 59 21.34542620457317 29.189630371890807 27.516579660487345 21.948363763048683 60 21.262039941132578 29.334131880623765 27.688789240084084 21.715038938159577 61 22.014233840119818 28.775218104956164 27.781758559878746 21.428789495045272 62 21.971115943876864 28.95876246078366 27.83466553649387 21.23545605884561 63 21.308566795395915 28.87617658863597 28.103352138399057 21.711904477569057 64 21.62237149401591 28.601700812514647 27.648035427757673 22.127892265711775 65 21.32757594287146 28.88168167521027 27.696980961642236 22.093761420276035 66 21.39437365873807 29.184692329104152 27.759250778942075 21.661683233215705 67 21.59878315197042 28.998731252755462 27.406915884661625 21.995569710612493 68 21.45754877082963 28.853582453815196 28.187950197453844 21.50091857790133 69 21.477912396660077 29.487311873529087 27.15656845464447 21.878207275166364 70 21.748351839779613 28.908667410157086 27.804745767582023 21.53823498248128 71 21.620012660557872 28.987828804116027 27.636561176982926 21.755597358343174 72 21.683862898251167 29.782268861008177 26.934138328276674 21.59972991246398 73 21.484163854763953 29.291616010516126 27.374254524035706 21.84996561068421 74 21.489725643017163 29.40302326938704 27.250818222224215 21.856432865371577 75 21.6442100310496 29.394218561159093 27.56168167068031 21.399889737111007 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 936.0 1 1118.5 2 1408.0 3 1517.0 4 1519.0 5 1339.5 6 1124.0 7 1035.5 8 983.0 9 1310.0 10 1941.5 11 2137.5 12 2029.0 13 1878.5 14 1819.5 15 2029.0 16 2147.0 17 2365.5 18 2794.5 19 3367.5 20 3730.0 21 4249.5 22 5767.5 23 7402.0 24 8038.0 25 9255.0 26 12171.0 27 15321.0 28 16772.0 29 19198.5 30 23709.5 31 27780.5 32 29767.0 33 33385.5 34 39836.0 35 45331.5 36 47995.0 37 49315.5 38 49394.5 39 48218.0 40 48283.0 41 49982.5 42 51375.0 43 50188.5 44 49309.0 45 50481.5 46 51279.5 47 51039.5 48 51174.0 49 50473.0 50 48480.0 51 44870.5 52 42553.0 53 40621.5 54 37406.0 55 33662.5 56 31203.0 57 29957.0 58 26130.0 59 21051.0 60 18553.0 61 16837.0 62 12906.5 63 9117.0 64 7542.0 65 6324.5 66 4297.0 67 2983.0 68 2479.0 69 2163.5 70 1441.0 71 842.0 72 650.0 73 587.5 74 485.0 75 333.0 76 221.0 77 185.0 78 107.5 79 55.0 80 44.0 81 37.0 82 19.5 83 6.0 84 3.0 85 2.5 86 1.0 87 1.0 88 2.0 89 1.5 90 0.5 91 0.5 92 1.0 93 0.5 94 1.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0049383868893909085 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.09643322762192429 29 0.0 30 0.0 31 0.0 32 0.0 33 0.059440220377759666 34 8.978885253438016E-5 35 0.0 36 0.0 37 8.978885253438016E-5 38 7.183108202750412E-4 39 2.693665576031404E-4 40 0.0 41 7.183108202750412E-4 42 0.001257043935481322 43 0.0 44 6.28521967740661E-4 45 0.001257043935481322 46 0.0 47 0.0 48 8.978885253438016E-5 49 0.0 50 8.978885253438016E-5 51 0.0010774662304125617 52 3.591554101375206E-4 53 1.795777050687603E-4 54 0.0033221875437720655 55 0.001795777050687603 56 4.489442626719007E-4 57 5.387331152062808E-4 58 9.876773778781816E-4 59 8.978885253438015E-4 60 0.0031426098387033054 61 0.003591554101375206 62 0.0026936655760314045 63 0.0015264104930844628 64 0.0018855659032219834 65 0.002244721313359504 66 0.0030528209861689255 67 0.002424299018428264 68 0.004130287216581487 69 0.004040498364047107 70 0.005207753446994049 71 0.0026038767234970246 72 9.876773778781816E-4 73 5.387331152062808E-4 74 0.0026038767234970246 75 0.0019753547557563632 >>END_MODULE >>Sequence Length Distribution pass #Length Count 75 1113724.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.415085901943236 #Duplication Level Percentage of deduplicated Percentage of total 1 80.69244712555926 48.75041124728675 2 9.910776925876425 11.97520878663642 3 3.823106763099876 6.929199705149373 4 1.8521077877873289 4.47581004395318 5 1.0367603564538845 3.131798299744536 6 0.6700415226067138 2.428836968769207 7 0.4298916376722127 1.8180358152945653 8 0.30375663390939633 1.468118650473704 9 0.22176273239193647 1.205803307457764 >10 0.9523568408659138 10.102884756381576 >50 0.0659407633970908 2.747299604282253 >100 0.03983907638467344 4.5002256546484505 >500 0.0012118339954308023 0.46636715992223543 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.795777050687603E-4 0.0 8 0.0 0.0 0.0 1.795777050687603E-4 0.0 9 0.0 0.0 0.0 1.795777050687603E-4 0.0 10 0.0 0.0 0.0 2.6936655760314047E-4 0.0 11 0.0 0.0 0.0 3.591554101375206E-4 0.0 12 0.0 0.0 0.0 3.591554101375206E-4 0.0 13 0.0 0.0 0.0 3.591554101375206E-4 0.0 14 0.0 0.0 0.0 3.591554101375206E-4 0.0 15 0.0 0.0 0.0 3.591554101375206E-4 0.0 16 0.0 0.0 0.0 3.591554101375206E-4 0.0 17 0.0 0.0 0.0 3.591554101375206E-4 0.0 18 0.0 0.0 0.0 3.591554101375206E-4 0.0 19 0.0 0.0 0.0 4.489442626719008E-4 0.0 20 0.0 0.0 0.0 4.489442626719008E-4 0.0 21 0.0 0.0 0.0 6.285219677406611E-4 0.0 22 0.0 0.0 0.0 7.183108202750412E-4 0.0 23 0.0 0.0 0.0 9.876773778781816E-4 0.0 24 0.0 0.0 0.0 0.002334510165893884 0.0 25 0.0 0.0 0.0 0.002424299018428264 0.0 26 0.0 0.0 0.0 0.002963032133634545 0.0 27 0.0 0.0 0.0 0.002963032133634545 0.0 28 0.0 0.0 0.0 0.005387331152062809 0.0 29 0.0 0.0 0.0 0.009248251811041155 0.0 30 0.0 0.0 0.0 0.015982415751119666 0.0 31 0.0 0.0 0.0 0.032503564617445614 0.0 32 0.0 0.0 0.0 0.04624125905520578 0.0 33 0.0 0.0 0.0 0.06303177447913487 0.0 34 0.0 0.0 0.0 0.08152827810121718 0.0 35 0.0 0.0 0.0 0.100383937133437 0.0 36 0.0 0.0 0.0 0.12310051682463519 0.0 37 0.0 0.0 0.0 0.15775901390290592 0.0 38 0.0 0.0 0.0 0.202653440170096 0.0 39 0.0 0.0 0.0 0.2590408395616867 0.0 40 0.0 0.0 0.0 0.3171342271514307 0.0 41 0.0 0.0 0.0 0.3755867701513122 0.0 42 0.0 0.0 0.0 0.43089670331249036 0.0 43 0.0 0.0 0.0 0.48503938139072156 0.0 44 0.0 0.0 0.0 0.5457366457039625 0.0 45 0.0 0.0 0.0 0.607960320510288 0.0 46 0.0 0.0 0.0 0.6778160477820357 0.0 47 0.0 0.0 0.0 0.744708742920149 0.0 48 0.0 0.0 0.0 0.8115116492057278 0.0 49 0.0 0.0 0.0 0.8907952059935855 0.0 50 0.0 0.0 0.0 0.96837277458329 0.0 51 0.0 0.0 0.0 1.0533130290808135 0.0 52 0.0 0.0 0.0 1.132327219311068 0.0 53 0.0 0.0 0.0 1.213586130854682 0.0 54 0.0 0.0 0.0 1.2973591302692589 0.0 55 0.0 0.0 0.0 1.3849930503428138 0.0 56 0.0 0.0 0.0 1.4755900025500035 0.0 57 0.0 0.0 0.0 1.5604404681949926 0.0 58 0.0 0.0 0.0 1.6547187633560918 0.0 59 0.0 0.0 0.0 1.753755867701513 0.0 60 0.0 0.0 0.0 1.8565641038533784 0.0 61 0.0 0.0 0.0 1.9696980580466974 0.0 62 0.0 0.0 0.0 2.0828320122400164 0.0 63 0.0 0.0 0.0 2.1954272333181293 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1300 0.0 42.988533 1 GTATCAA 3420 0.0 40.95254 1 GACGCGT 40 0.0025991353 34.492325 20 ATCAACG 4640 0.0 29.660425 3 TATCAAC 4765 0.0 29.316666 2 TCAACGC 4680 0.0 29.185812 4 CAACGCA 4820 0.0 28.409653 5 AACGCAG 4965 0.0 27.441023 6 ACGCAGA 5640 0.0 23.91223 7 GTACATG 7285 0.0 23.818771 1 CGCAGAG 5585 0.0 23.653643 8 GAGTACT 2335 0.0 23.04412 12 ACACCGT 90 2.1295034E-4 22.994883 34 AACCGTT 165 3.1523086E-9 22.99488 34 TACATGG 7550 0.0 22.522802 2 ACGAAAT 155 4.0958184E-8 22.25311 12 CGTATAG 110 3.2690084E-5 21.952616 1 TCGCTAA 110 3.2724092E-5 21.94966 46 GTACTTT 2420 0.0 21.807129 14 AGTACTT 2585 0.0 21.61608 13 >>END_MODULE