##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3203954_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 482601 Sequences flagged as poor quality 0 Sequence length 75 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.32661971276479 35.0 27.0 35.0 15.0 35.0 2 30.168143041560214 35.0 27.0 35.0 15.0 35.0 3 30.158172071752855 35.0 27.0 35.0 15.0 35.0 4 30.323664890872585 35.0 30.0 35.0 15.0 35.0 5 30.485521165517685 35.0 31.0 35.0 15.0 35.0 6 33.61477286619796 39.0 30.0 40.0 16.0 40.0 7 33.47485396839211 39.0 30.0 40.0 16.0 40.0 8 33.39288149009223 39.0 30.0 40.0 16.0 40.0 9 33.292144027882244 39.0 27.0 40.0 16.0 40.0 10 33.44034098561752 39.0 28.0 40.0 16.0 40.0 11 33.43429043868537 39.0 30.0 40.0 16.0 40.0 12 33.045366669360405 39.0 27.0 40.0 16.0 40.0 13 33.067683241435475 39.0 27.0 40.0 16.0 40.0 14 33.06335046964262 39.0 27.0 40.0 16.0 40.0 15 33.14208631975483 39.0 27.0 40.0 16.0 40.0 16 33.29855304899907 39.0 27.0 40.0 16.0 40.0 17 33.3330266617765 39.0 30.0 40.0 16.0 40.0 18 33.39992250326875 39.0 30.0 40.0 16.0 40.0 19 33.454746260368296 39.0 30.0 40.0 16.0 40.0 20 33.447371638268464 39.0 30.0 40.0 16.0 40.0 21 33.47941674385258 39.0 30.0 40.0 16.0 40.0 22 33.54133124465138 39.0 31.0 40.0 16.0 40.0 23 33.57276300712183 39.0 31.0 40.0 16.0 40.0 24 33.60380314172578 39.0 31.0 40.0 16.0 40.0 25 33.62995518036639 39.0 31.0 40.0 16.0 40.0 26 33.65171642827097 39.0 31.0 40.0 16.0 40.0 27 33.656453260561 39.0 31.0 40.0 16.0 40.0 28 33.531671090611084 39.0 31.0 40.0 16.0 40.0 29 33.63513751525588 39.0 31.0 40.0 16.0 40.0 30 33.6216667599114 39.0 31.0 40.0 16.0 40.0 31 33.59992623305795 39.0 31.0 40.0 16.0 40.0 32 33.55450983317482 39.0 31.0 40.0 16.0 40.0 33 33.41693655835773 39.0 31.0 40.0 16.0 40.0 34 33.437999506838985 39.0 31.0 40.0 16.0 40.0 35 33.399771239595445 39.0 31.0 40.0 16.0 40.0 36 33.41637501787191 39.0 31.0 40.0 16.0 40.0 37 33.36989355596031 39.0 31.0 40.0 16.0 40.0 38 33.35373113607307 39.0 31.0 40.0 16.0 40.0 39 33.28117844762029 39.0 31.0 40.0 16.0 40.0 40 33.2016158275677 39.0 30.0 40.0 16.0 40.0 41 33.14026286725473 39.0 30.0 40.0 16.0 40.0 42 33.12254015221684 39.0 30.0 40.0 16.0 40.0 43 33.03242430081993 39.0 30.0 40.0 16.0 40.0 44 32.89119997679242 38.0 30.0 40.0 16.0 40.0 45 32.89159160465892 38.0 30.0 40.0 16.0 40.0 46 32.8307877522011 38.0 30.0 40.0 16.0 40.0 47 32.736349489536906 38.0 30.0 40.0 16.0 40.0 48 32.7622715245099 38.0 30.0 40.0 16.0 40.0 49 32.69959448902924 38.0 30.0 40.0 16.0 40.0 50 32.58773603867377 38.0 27.0 40.0 16.0 40.0 51 32.61228012374612 38.0 28.0 40.0 16.0 40.0 52 32.61965889005617 38.0 30.0 40.0 16.0 40.0 53 32.547054398975554 38.0 28.0 40.0 16.0 40.0 54 32.576190268979964 38.0 30.0 40.0 16.0 40.0 55 32.53131054432129 38.0 30.0 40.0 16.0 40.0 56 32.4845742134807 38.0 28.0 40.0 16.0 40.0 57 32.361213507638816 38.0 27.0 40.0 16.0 40.0 58 32.36596691676976 38.0 27.0 40.0 16.0 40.0 59 32.276151520614334 38.0 27.0 40.0 16.0 40.0 60 32.2134475477672 38.0 27.0 40.0 16.0 40.0 61 32.179172857080694 38.0 27.0 40.0 16.0 40.0 62 32.12041210026502 38.0 27.0 40.0 16.0 40.0 63 32.079929382657724 38.0 27.0 40.0 16.0 40.0 64 32.04667002347695 38.0 27.0 39.0 16.0 40.0 65 31.954716214844147 38.0 27.0 39.0 16.0 40.0 66 31.906438237798927 38.0 27.0 39.0 16.0 40.0 67 31.866280840694486 38.0 27.0 39.0 16.0 40.0 68 31.826193895163915 38.0 27.0 39.0 16.0 40.0 69 31.786635336437346 38.0 27.0 39.0 16.0 40.0 70 31.67013951483731 38.0 27.0 39.0 16.0 40.0 71 31.544922202813503 38.0 27.0 39.0 15.0 40.0 72 31.502309361149273 38.0 27.0 39.0 15.0 40.0 73 31.42858386120211 38.0 27.0 39.0 15.0 40.0 74 31.34417251518335 38.0 27.0 39.0 15.0 40.0 75 31.230326916023795 38.0 27.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6876.0 3 958.0 4 1099.0 5 1074.0 6 1081.0 7 1013.0 8 1029.0 9 1109.0 10 1173.0 11 1275.0 12 1351.0 13 1416.0 14 1577.0 15 1798.0 16 1893.0 17 1991.0 18 2553.0 19 4702.0 20 7786.0 21 9022.0 22 9135.0 23 9391.0 24 9739.0 25 9932.0 26 10668.0 27 11067.0 28 12069.0 29 12952.0 30 13666.0 31 14983.0 32 16406.0 33 18193.0 34 20021.0 35 23003.0 36 27972.0 37 38421.0 38 66699.0 39 107508.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.852984326174706 15.475933922932192 11.62875993601167 27.042321814881433 2 16.225411882693987 20.420388685477235 36.80949687215733 26.544702559671446 3 19.937588193973905 23.875209541629626 27.062936048619875 29.124266215776593 4 13.952312572912199 16.07228331478799 34.20092374445971 35.7744803678401 5 15.481526146858377 36.9537153880742 31.50697988607566 16.057778578991755 6 34.28857379077126 34.949782532568314 16.001002898875054 14.760640777785374 7 30.327744865841556 31.22579522214003 19.441526229742582 19.004933682275833 8 27.396544971933334 34.9037817990431 18.056945592736028 19.642727636287532 9 27.889084357471283 16.211114357409123 16.54803864890458 39.35176263621501 10 15.100880437462832 29.178969790779547 31.518376464201275 24.201773307556344 11 36.557114469302796 23.039943970277722 20.94877548948303 19.454166070936445 12 25.2415556536352 24.62096017206761 27.712333791268563 22.42515038302863 13 29.573705814948582 21.606254442075336 23.30102921461 25.51901052836608 14 24.009274742489136 20.49187631190155 24.78299879196272 30.715850153646596 15 24.953118621801444 27.616602535013396 22.354284388138442 25.07599445504671 16 25.437784007907155 27.073710995211364 23.01777244556062 24.470732551320864 17 24.501192496492962 26.66820002445084 24.07081626436746 24.75979121468874 18 24.165925889088502 26.480674511656627 25.120959136015053 24.23244046323982 19 25.310763964434386 25.770149668152364 25.134013398231662 23.78507296918158 20 25.376656907051583 25.47736121557974 25.523983580639083 23.621998296729597 21 25.762690089742872 25.15742818601702 25.153905607323644 23.92597611691646 22 25.472388163306746 25.053822930329613 25.129247556470048 24.344541349893596 23 25.542839737174187 24.99207419793991 24.89219873145725 24.57288733342865 24 24.451876394785753 25.472595373818123 25.21544712920197 24.86008110219415 25 25.34225996216336 24.912090940549234 25.095265032604573 24.650384064682836 26 24.62531159280648 25.806618718154333 25.320088437446252 24.247981251592932 27 24.74383600531288 25.67234630678345 25.025642300782636 24.558175387121036 28 25.258900515415807 25.4789633608844 24.944465761664265 24.31767036203553 29 25.175455500506626 25.68125635877257 24.90090157293499 24.24238656778581 30 25.4415137971119 25.549470473538182 24.848270103045788 24.16074562630413 31 25.228915812441333 25.09940924283207 24.86008110219415 24.811593842532446 32 24.563770070928157 25.66882372809008 25.09940924283207 24.667996958149693 33 24.910480100353517 25.376792212235248 25.095014462103073 24.61771322530816 34 25.20902360334935 25.395927484609437 24.993110250496787 24.401938661544424 35 25.212338971531352 25.193690025507614 25.091949664422575 24.502021338538462 36 25.137121555902286 25.379557854210827 24.947316727482953 24.53600386240393 37 25.026885563850882 24.90939720390136 25.239276338010075 24.824440894237682 38 24.691565236490824 25.44685224555427 25.162143233084265 24.69943928487064 39 25.18581602607537 25.26911465164805 25.142094608175285 24.402974714101298 40 25.072886297376094 25.04139029964712 25.69265293689818 24.193070466078602 41 24.7469441629835 25.003885197088277 25.544911842287938 24.704258797640286 42 24.693844566284984 25.06185272214141 25.791445468070734 24.452857243502873 43 24.34682066551872 25.197212604200985 25.53786668490119 24.918100045379102 44 24.63639584831299 25.4480427850037 25.426078379772854 24.489482986910456 45 24.686799365103045 25.66898329458473 25.206693769970034 24.43752357034219 46 24.765385898495857 25.60168752240464 24.70011458741279 24.932811991686716 47 24.371478716372323 25.781131825255233 25.01776830135039 24.829621157022054 48 24.20881846494309 25.918926815319487 25.061489719250478 24.810765000486946 49 24.750881162699624 25.490001056773608 24.78610694963334 24.97301083089343 50 24.828480788397822 25.610703710534004 24.96337539033442 24.597440110733757 51 24.527817090379383 25.665821934981214 24.66001794450465 25.146343030134748 52 24.592416079569002 25.874015748031496 24.528802320762537 25.004765851636968 53 24.662038955656858 25.650849564857026 24.731454620803976 24.955656858682136 54 24.50682569811102 25.854766384576493 24.706374795892145 24.932033121420343 55 24.57909667152238 25.356148970250292 24.759580018773583 25.30517433945374 56 24.66659759635309 25.82905097389142 24.7563199336925 24.748031496062993 57 24.82392213825557 25.51414321206633 24.371372505952145 25.290562143725953 58 24.463167142907466 25.418618770449168 24.817913008522606 25.300301078120757 59 25.213012847078325 25.484251968503933 24.35060091172814 24.952134272689598 60 24.6570091153415 25.661582327136944 24.554438211909417 25.126970345612143 61 24.70347377058692 25.353303438958285 24.812676651719478 25.130546138735323 62 24.969850433283465 25.481046179604387 24.490358355056216 25.058745032055928 63 24.534756743203957 25.587187653466557 24.45249348835571 25.425562114973776 64 24.68736725411577 25.339259627638082 24.44575679399911 25.527616324247038 65 24.86805706648432 25.41862224018069 24.47248728229675 25.240833411038246 66 24.584480790071883 26.003079224764758 24.44108755069013 24.971352434473225 67 24.67166746099173 25.473383203133093 24.313392320603413 25.541557015271763 68 24.626695566763786 25.787948991052296 24.730304901550408 24.85505054063351 69 24.784442119004943 25.502657562916376 24.337474227338188 25.375426090740493 70 24.489411082100375 25.24659123875834 24.913589456670397 25.35040822247089 71 24.7540344973352 25.407179623198257 24.6817160807977 25.157069798668847 72 24.232120100705558 25.619204508956784 24.63204135973228 25.516634030605374 73 24.51906340654787 25.396187318690426 24.684210526315788 25.400538748445918 74 24.388252626954802 25.575795753357383 24.58552030385853 25.45043131582928 75 24.675607239211427 25.31817635528001 24.65177768476193 25.35443872074663 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 96.0 1 118.0 2 172.5 3 204.5 4 204.0 5 181.0 6 168.0 7 193.0 8 208.0 9 245.5 10 351.0 11 414.5 12 410.0 13 438.0 14 474.5 15 538.5 16 594.0 17 690.5 18 802.5 19 956.0 20 1094.0 21 1161.5 22 1446.5 23 1854.0 24 2044.0 25 2253.5 26 2688.5 27 3148.0 28 3382.0 29 3646.0 30 4235.0 31 4978.5 32 5397.0 33 5645.0 34 6404.5 35 7337.0 36 7758.0 37 8338.0 38 9146.5 39 9927.5 40 10480.0 41 11272.5 42 12711.5 43 14317.5 44 15277.0 45 16197.5 46 18434.0 47 21130.0 48 22510.0 49 24032.5 50 26727.0 51 28605.0 52 29311.0 53 29642.5 54 29919.0 55 29437.0 56 29010.0 57 28157.5 58 25531.0 59 21558.0 60 19359.0 61 18020.0 62 14369.0 63 10646.0 64 9235.0 65 7670.5 66 5166.0 67 3674.5 68 3123.0 69 2626.0 70 1745.5 71 1054.5 72 747.0 73 659.5 74 460.5 75 289.0 76 229.0 77 168.5 78 86.0 79 45.5 80 27.0 81 21.0 82 10.5 83 4.0 84 2.0 85 2.0 86 1.5 87 0.5 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0026937366478726734 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.09656009830066659 29 0.0 30 0.0 31 0.0 32 0.0 33 0.06340641648069523 34 0.0 35 0.0 36 0.0 37 0.0 38 6.216315341244631E-4 39 0.0 40 0.0 41 0.0 42 6.216315341244631E-4 43 0.0 44 4.1442102274964206E-4 45 6.216315341244631E-4 46 0.0 47 0.0 48 0.0 49 0.0 50 4.1442102274964206E-4 51 4.1442102274964206E-4 52 2.0721051137482103E-4 53 2.0721051137482103E-4 54 0.0026937366478726734 55 0.0016576840909985683 56 2.0721051137482103E-4 57 4.1442102274964206E-4 58 4.1442102274964206E-4 59 2.0721051137482103E-4 60 0.0016576840909985683 61 0.0026937366478726734 62 0.001450473579623747 63 8.288420454992841E-4 64 0.0012432630682489261 65 0.0012432630682489261 66 0.0024865261364978523 67 0.002279315625123031 68 0.0039369997161216 69 0.0033153681819971365 70 0.004351420738871242 71 0.0026937366478726734 72 0.0012432630682489261 73 2.0721051137482103E-4 74 0.0016576840909985683 75 0.001450473579623747 >>END_MODULE >>Sequence Length Distribution pass #Length Count 75 482601.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.82223515005639 #Duplication Level Percentage of deduplicated Percentage of total 1 91.89236859668134 77.9451609760336 2 5.335013402727516 9.050555227497117 3 1.3061486436318257 3.3237134217319775 4 0.5331699719027544 1.8089867492673755 5 0.2710744476158881 1.1496570269423252 6 0.1590777065594583 0.8095995979750824 7 0.10861842400964807 0.644928025208243 8 0.07558978847742709 0.5129355850540274 9 0.05532541217865201 0.4223542609432273 >10 0.2520391381092576 3.5978689144951876 >50 0.010096877132005183 0.5650412466042529 >100 0.0014775909742359664 0.16919896824752131 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.0721051137482103E-4 0.0 0.0 0.0 0.0 3 2.0721051137482103E-4 0.0 0.0 0.0 0.0 4 2.0721051137482103E-4 0.0 0.0 0.0 0.0 5 2.0721051137482103E-4 0.0 0.0 0.0 0.0 6 2.0721051137482103E-4 0.0 0.0 0.0 0.0 7 2.0721051137482103E-4 0.0 0.0 0.0 0.0 8 2.0721051137482103E-4 0.0 0.0 0.0 0.0 9 2.0721051137482103E-4 0.0 0.0 0.0 0.0 10 2.0721051137482103E-4 0.0 0.0 0.0 0.0 11 2.0721051137482103E-4 0.0 0.0 0.0 0.0 12 2.0721051137482103E-4 0.0 0.0 0.0 0.0 13 2.0721051137482103E-4 0.0 0.0 0.0 0.0 14 2.0721051137482103E-4 0.0 0.0 0.0 0.0 15 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0 0.0 16 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0 0.0 17 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0 0.0 18 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0 0.0 19 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0 0.0 20 2.0721051137482103E-4 2.0721051137482103E-4 0.0 2.0721051137482103E-4 0.0 21 2.0721051137482103E-4 2.0721051137482103E-4 0.0 4.1442102274964206E-4 0.0 22 2.0721051137482103E-4 2.0721051137482103E-4 0.0 6.216315341244631E-4 0.0 23 2.0721051137482103E-4 2.0721051137482103E-4 0.0 8.288420454992841E-4 0.0 24 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0016576840909985683 0.0 25 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0018648946023733892 0.0 26 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0024865261364978523 0.0 27 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0035225786933719572 0.0 28 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.006837946875369093 0.0 29 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.012018209659739619 0.0 30 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.021549893182981388 0.0 31 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.04496468096833616 0.0 32 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.0690011002878154 0.0 33 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.09448799318691839 0.0 34 2.0721051137482103E-4 2.0721051137482103E-4 0.0 0.12681283296139045 0.0 35 4.1442102274964206E-4 2.0721051137482103E-4 0.0 0.15250693637186827 0.0 36 4.1442102274964206E-4 2.0721051137482103E-4 0.0 0.1893904073965864 0.0 37 4.1442102274964206E-4 2.0721051137482103E-4 0.0 0.24098582472891686 0.0 38 4.1442102274964206E-4 2.0721051137482103E-4 0.0 0.31102297757360636 0.0 39 4.1442102274964206E-4 2.0721051137482103E-4 0.0 0.38893412985053905 0.0 40 4.1442102274964206E-4 2.0721051137482103E-4 0.0 0.46953901877534443 0.0 41 4.1442102274964206E-4 2.0721051137482103E-4 0.0 0.5416482767337821 0.0 42 4.1442102274964206E-4 4.1442102274964206E-4 0.0 0.6232892182154617 0.0 43 4.1442102274964206E-4 4.1442102274964206E-4 0.0 0.6962273182193986 0.0 44 4.1442102274964206E-4 4.1442102274964206E-4 0.0 0.771030312825709 0.0 45 4.1442102274964206E-4 4.1442102274964206E-4 0.0 0.8566082540235102 0.0 46 4.1442102274964206E-4 4.1442102274964206E-4 0.0 0.9457087739146831 0.0 47 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.044133766817723 0.0 48 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.140486654607015 0.0 49 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.2277222798958145 0.0 50 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.3224174835941078 0.0 51 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.4206352659857728 0.0 52 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.518853048377438 0.0 53 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.6108545154278586 0.0 54 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.7061713506602763 0.0 55 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.8023170279381933 0.0 56 4.1442102274964206E-4 4.1442102274964206E-4 0.0 1.9026069154436067 0.0 57 4.1442102274964206E-4 4.1442102274964206E-4 0.0 2.0026895924376453 0.0 58 4.1442102274964206E-4 4.1442102274964206E-4 0.0 2.1044299535226823 0.0 59 4.1442102274964206E-4 4.1442102274964206E-4 0.0 2.1997467887551 0.0 60 4.1442102274964206E-4 4.1442102274964206E-4 0.0 2.3091539387610056 0.0 61 4.1442102274964206E-4 4.1442102274964206E-4 0.0 2.415245720584914 0.0 62 4.1442102274964206E-4 4.1442102274964206E-4 0.0 2.535220606670935 0.0 63 4.1442102274964206E-4 4.1442102274964206E-4 0.0 2.6429700725858423 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 820 0.0 38.697033 1 TCAACGC 1055 0.0 27.78882 4 GGTATCA 375 0.0 27.592665 1 TATCAAC 1115 0.0 27.530798 2 ATCAACG 1080 0.0 27.464922 3 CAACGCA 1080 0.0 26.826202 5 TGCGATA 65 8.6632214E-4 26.531408 13 GCGATAC 65 8.6632214E-4 26.531408 14 AACGCAG 1085 0.0 26.384691 6 TAATACC 70 0.0013347921 24.636309 4 TGCGTAT 85 1.4442089E-4 24.34647 10 GCACCGT 115 1.6981685E-6 23.993622 6 GTACATG 1400 0.0 21.926315 1 AGTATAC 80 0.0029014933 21.556768 3 GTATAGC 160 5.7170837E-8 21.556768 1 CTCCTAA 145 5.2933683E-7 21.4081 1 TACATGG 1410 0.0 21.036959 2 TTAATAC 115 4.6049514E-5 20.99442 3 ACGCAGA 1315 0.0 20.983015 7 CTCTATA 135 6.825525E-6 20.439013 2 >>END_MODULE