##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3203943_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1578583 Sequences flagged as poor quality 0 Sequence length 75 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.55225287488843 35.0 32.0 35.0 27.0 35.0 2 32.69093991256716 35.0 32.0 35.0 27.0 35.0 3 32.64019060131776 35.0 32.0 35.0 27.0 35.0 4 32.792989028768204 35.0 33.0 35.0 30.0 35.0 5 32.831877069498404 35.0 32.0 35.0 30.0 35.0 6 36.31938263619968 39.0 36.0 40.0 27.0 40.0 7 36.12729454200381 39.0 36.0 40.0 27.0 40.0 8 35.98892171016665 39.0 36.0 40.0 27.0 40.0 9 35.98279723017415 39.0 36.0 40.0 27.0 40.0 10 35.931878779893104 39.0 36.0 40.0 27.0 40.0 11 36.015093283026616 39.0 36.0 40.0 27.0 40.0 12 36.00905242233066 39.0 36.0 40.0 27.0 40.0 13 35.99194720835078 39.0 36.0 40.0 27.0 40.0 14 35.92154039413829 39.0 36.0 40.0 27.0 40.0 15 35.87366517946791 39.0 36.0 40.0 27.0 40.0 16 35.87044837046896 39.0 36.0 40.0 27.0 40.0 17 35.56369351500681 39.0 35.0 40.0 27.0 40.0 18 35.52547886300562 39.0 35.0 40.0 27.0 40.0 19 35.74571498616164 39.0 35.0 40.0 27.0 40.0 20 35.726085989776905 39.0 35.0 40.0 27.0 40.0 21 35.49348941424049 39.0 35.0 40.0 27.0 40.0 22 35.486075169946716 39.0 35.0 40.0 27.0 40.0 23 35.284622981496696 39.0 35.0 40.0 16.0 40.0 24 35.321396467591505 39.0 35.0 40.0 27.0 40.0 25 35.075276371277276 39.0 35.0 40.0 16.0 40.0 26 35.11832510549018 39.0 35.0 40.0 16.0 40.0 27 35.21875948239656 39.0 35.0 40.0 16.0 40.0 28 35.191345022719744 39.0 34.0 40.0 16.0 40.0 29 35.17601925270955 39.0 35.0 40.0 16.0 40.0 30 35.10165635889909 39.0 34.0 40.0 16.0 40.0 31 35.12946294239834 39.0 34.0 40.0 16.0 40.0 32 34.919256700471244 39.0 34.0 40.0 16.0 40.0 33 35.13376046745721 39.0 34.0 40.0 16.0 40.0 34 35.15604247606873 39.0 34.0 40.0 16.0 40.0 35 35.202588650707625 39.0 35.0 40.0 16.0 40.0 36 35.19146031599225 39.0 35.0 40.0 16.0 40.0 37 34.99591532405962 39.0 34.0 40.0 16.0 40.0 38 35.03887663809885 39.0 34.0 40.0 16.0 40.0 39 35.075921253427914 39.0 34.0 40.0 16.0 40.0 40 35.150483059807435 39.0 35.0 40.0 16.0 40.0 41 35.278488999311406 39.0 35.0 40.0 27.0 40.0 42 34.99079554258471 39.0 34.0 40.0 16.0 40.0 43 34.9421145419658 39.0 34.0 40.0 16.0 40.0 44 34.99517985433772 39.0 35.0 40.0 16.0 40.0 45 34.827214026756906 39.0 34.0 40.0 16.0 40.0 46 34.75076191749183 39.0 34.0 40.0 16.0 40.0 47 34.84915775730513 39.0 34.0 40.0 16.0 40.0 48 34.7389848997487 39.0 34.0 40.0 16.0 40.0 49 34.768748301483036 39.0 34.0 40.0 16.0 40.0 50 34.688599839222896 39.0 34.0 40.0 16.0 40.0 51 34.34683320420909 39.0 34.0 40.0 16.0 40.0 52 34.6624536055437 39.0 34.0 40.0 16.0 40.0 53 34.67788199923602 39.0 34.0 40.0 16.0 40.0 54 34.621139971734145 39.0 34.0 40.0 16.0 40.0 55 34.53441599206377 39.0 34.0 40.0 16.0 40.0 56 34.563929802867506 39.0 34.0 40.0 16.0 40.0 57 34.5124082800841 39.0 34.0 40.0 16.0 40.0 58 34.55102139070293 39.0 34.0 40.0 16.0 40.0 59 34.51223280625726 39.0 34.0 40.0 16.0 40.0 60 34.18678016930374 39.0 34.0 40.0 16.0 40.0 61 34.44492560733265 39.0 34.0 40.0 16.0 40.0 62 34.16570747309454 39.0 34.0 40.0 16.0 40.0 63 34.33415981294617 39.0 34.0 40.0 16.0 40.0 64 34.33050273568131 39.0 34.0 40.0 16.0 40.0 65 34.267048359193026 39.0 34.0 40.0 16.0 40.0 66 34.27141556699901 39.0 34.0 40.0 16.0 40.0 67 34.24768035637024 39.0 34.0 40.0 16.0 40.0 68 34.14089217988538 39.0 34.0 40.0 16.0 40.0 69 34.026412928556816 39.0 34.0 40.0 16.0 40.0 70 33.92709981039958 39.0 34.0 40.0 16.0 40.0 71 33.874007258408334 39.0 34.0 40.0 16.0 40.0 72 33.892658795894796 39.0 34.0 40.0 16.0 40.0 73 33.71013180808358 39.0 34.0 40.0 16.0 40.0 74 33.62961909509985 39.0 34.0 40.0 16.0 40.0 75 33.553880917253004 39.0 34.0 40.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 529.0 3 1098.0 4 943.0 5 870.0 6 1072.0 7 1441.0 8 2190.0 9 3691.0 10 3332.0 11 2530.0 12 2529.0 13 2811.0 14 1759.0 15 1967.0 16 2387.0 17 2797.0 18 3262.0 19 4608.0 20 8337.0 21 13266.0 22 17515.0 23 21891.0 24 26270.0 25 29755.0 26 31476.0 27 34437.0 28 37718.0 29 40954.0 30 44552.0 31 48179.0 32 52127.0 33 57868.0 34 64933.0 35 73641.0 36 89882.0 37 121790.0 38 207995.0 39 516181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.18890473926137 15.449548264384214 11.816452686638137 27.545094309716276 2 16.412694169391155 18.165848739027343 36.64362279335328 28.77783429822822 3 19.574904160775407 22.25307892817239 27.132149441378843 31.03986746967336 4 13.39669373299904 15.215115232607367 33.52348635993743 37.864704674456156 5 15.673501605264558 35.844024538882366 32.033009915391034 16.449463940462042 6 35.590042743493406 33.84747215081405 15.711149308143574 14.851335797548968 7 31.25746318058664 29.763465082292157 18.987218283739278 19.991853453381925 8 28.496591889723966 32.85040683168028 18.202882352717552 20.450118925878193 9 27.76151400293065 14.09016586093934 16.39736938633163 41.750950749798385 10 15.321978839236733 27.656973156921843 31.67279241749874 25.348255586342678 11 37.60052604539169 20.750666267149214 21.516802221756258 20.13200546570284 12 25.61774733649318 22.378841955759622 28.05262777801006 23.95078292973714 13 30.37209205092486 19.325955728033318 23.911904576383176 26.390047644658647 14 24.099296566962973 18.27367498150194 24.72132547461458 32.9057029769205 15 25.591329594385627 25.93006482658745 21.95830395452953 26.520301624497396 16 26.106234775750163 25.166472915485414 23.00902447600072 25.71826783276369 17 24.686620829904875 25.212205273974604 24.19216193909027 25.909011957030252 18 24.93605674459019 24.49740696661847 25.018748843105737 25.547787445685604 19 25.82689728104908 24.2665308173327 25.111724038298867 24.79484786331935 20 25.827444063019943 23.78701306600671 25.09538780480696 25.29015506616638 21 25.968374367690917 23.608601948071776 25.205786709550033 25.217236974687278 22 25.63383238389679 23.767275133032438 25.123140487981754 25.475751995089013 23 25.607148004035164 23.35226017197483 25.04645241869626 25.994139405293748 24 25.325881692441175 23.64543459398765 25.27420507324044 25.75447864033073 25 25.50940002100419 23.58783844295783 25.1600603322915 25.742701203746478 26 25.536999413297394 23.999210897808705 25.140462752070754 25.323326936823147 27 25.417315639465908 24.136412909236807 25.10088140851307 25.34539004278421 28 25.379352727420784 23.98873202161986 24.940008448439073 25.691906802520283 29 25.693376566780508 23.778651917636314 24.88079765582055 25.647173859762624 30 25.53878820729451 23.72351175296472 25.239420539898518 25.49827949984225 31 25.18494956788376 23.771259896368445 24.97724113581205 26.066549399935745 32 25.025044131474644 23.924575530794673 25.105300644870372 25.945079692860308 33 25.300786311537944 23.638550361988845 25.48179666800725 25.578866658465966 34 25.491479620366462 23.920742370718422 24.9163293439877 25.67144866492741 35 25.38356578298691 23.641735977481275 25.301124345986864 25.673573893544948 36 25.623141268403245 23.666339071058367 24.947547354638786 25.762972305899602 37 25.444188688767543 23.70541301126051 25.20382531929965 25.6465729806723 38 25.579143846770595 23.708824205054963 25.10249356755681 25.60953838061763 39 25.721678557885646 23.96798133944305 24.67941507311586 25.630925029555442 40 25.59186240778694 23.486119011710237 25.53133084339153 25.39068773711129 41 25.35093996380718 23.706361094944135 24.95186482076921 25.990834120479477 42 25.725211012649563 23.611277299191656 25.212100426088462 25.451411262070323 43 25.533161666234733 23.426494863391884 25.247127852837803 25.793215617535576 44 25.519827692828244 24.11665979907323 24.59773311741534 25.765779390683186 45 25.384742098611767 23.83769629844933 24.91478972986484 25.862771873074063 46 25.875454828190858 23.648203869879545 24.418605390711807 26.057735911217794 47 25.353597928085957 23.783380165951563 24.8583891020985 26.004632803863974 48 25.23387786643092 24.014641018383955 24.690659195634407 26.06082191955072 49 25.779438101386027 23.57246343300554 24.740313998812827 25.907784466795604 50 25.731018973108235 23.776567102720854 24.983940958474548 25.508472965696367 51 25.23553802316279 24.04709347941378 24.386933402161674 26.330435095261763 52 25.528951370245924 23.87348797214797 24.706148727762802 25.891411929843304 53 25.400824130919663 24.020954981896214 24.814875823860618 25.763345063323502 54 25.22802538696422 23.959249584844653 24.644677266404756 26.168047761786372 55 25.528279750726007 23.701103175700695 24.77662141847072 25.993995655102577 56 25.309095977016955 24.21651447051259 24.723687169594978 25.750702382875478 57 25.59072102839528 23.890159052337705 24.351472280979163 26.167647638287857 58 25.310632484372974 24.03795516817658 24.756722102226327 25.894690245224123 59 25.446001240396903 24.119828168919504 24.65950851648404 25.774662074199554 60 25.542306126961645 24.328514614785593 24.595589766926135 25.533589491326623 61 25.445378215142288 24.308255825297458 24.652053218594833 25.59431274096542 62 25.237826695086714 24.67968508553095 24.33768873680555 25.74479948257679 63 25.022013873491495 24.41804187387159 24.63849735516772 25.921446897469195 64 25.411319204309052 24.33889051776389 24.4278037726441 25.82198650528296 65 25.46789701709479 24.370025278641748 24.404817661786176 25.75726004247729 66 25.25902517584062 24.48806336471074 24.489773938209016 25.76313752123962 67 25.470570234377526 24.31575739490139 24.349463459015137 25.864208911705948 68 25.376119552388115 24.49644296420283 24.479590679546202 25.64784680386285 69 25.398593267580654 24.349395797103845 24.371340212218396 25.880670723097097 70 25.33550951943336 24.032984387288046 24.542956307604456 26.088549785674136 71 25.432456887374922 23.99657329399718 24.463816823301602 26.1071529953263 72 25.15989718141184 24.322727484214237 24.518396381846262 25.99897895252767 73 25.3969279779815 23.948542395690577 24.464601038199742 26.18992858812818 74 25.411196262579395 24.212853783018414 24.41073228485033 25.96521766955186 75 25.311967139334545 24.27835214919148 24.43080180277262 25.978878908701358 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 85.0 1 74.0 2 123.0 3 206.5 4 230.0 5 184.5 6 175.5 7 305.0 8 398.0 9 701.5 10 1325.5 11 1552.0 12 1458.0 13 1395.0 14 1389.0 15 1461.0 16 1476.0 17 1601.0 18 1810.5 19 2041.5 20 2188.0 21 2421.0 22 2887.0 23 3326.5 24 3533.0 25 3813.0 26 4514.5 27 5218.0 28 5500.0 29 5896.5 30 6727.0 31 7656.5 32 8152.0 33 8837.5 34 10357.0 35 12173.0 36 13155.0 37 14544.5 38 17801.5 39 22724.0 40 25779.0 41 29645.0 42 38870.0 43 50063.5 44 55898.0 45 61843.5 46 72802.0 47 83074.0 48 88333.0 49 93286.0 50 101201.0 51 105887.0 52 107611.0 53 107023.0 54 106476.0 55 103485.5 56 100454.0 57 97746.0 58 88591.5 59 74388.5 60 66632.0 61 61155.5 62 48227.0 63 35360.0 64 29945.0 65 25097.5 66 16774.5 67 11400.0 68 9501.0 69 7921.5 70 5252.0 71 3413.5 72 2665.0 73 2285.0 74 1632.5 75 1056.5 76 753.0 77 617.0 78 363.0 79 185.5 80 126.0 81 95.0 82 46.5 83 21.0 84 13.0 85 8.0 86 2.5 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.08444281992141053 2 0.0 3 0.04307660731174731 4 0.046307352860128354 5 0.001710394702084084 6 0.05061501359130308 7 0.0 8 0.018307558107492607 9 0.005828011577471695 10 6.334795192904017E-5 11 7.601754231484819E-4 12 0.0015836987982260039 13 0.0013936549424388835 14 0.002470570125232566 15 0.004054268923458571 16 0.006208099289045936 17 0.06974609507387321 18 0.4108748162117545 19 0.023058654502170615 20 0.018307558107492607 21 0.4160060003180067 22 0.41796978682780694 23 1.096426351987827 24 0.7058862283452945 25 1.6794809015427126 26 1.0968697876513305 27 1.00450847373879 28 0.42411453816492384 29 1.0074858274794547 30 1.0107799209797648 31 0.4224041434628398 32 1.0983901384976273 33 0.608900513941934 34 0.4210104885204009 35 0.4154358687506453 36 1.0577841013111127 37 1.0893947293237036 38 1.0010243363826925 39 0.6016788474220235 40 0.998490418305531 41 0.4084675940384509 42 0.998490418305531 43 0.7592252038695463 44 1.1474848012426333 45 0.39883870534523685 46 0.3982052258259464 47 0.4001690123357467 48 0.3983319217298045 49 0.0026606139810196865 50 0.0020904824136583253 51 1.3356915664238118 52 0.39744505040279793 53 0.39655817907579144 54 0.3978251381143722 55 0.5945838768059709 56 0.0017737426540131245 57 0.0029140057887358474 58 0.3995355328164563 59 0.003547485308026249 60 1.1623082219940288 61 0.0023438742213744857 62 0.5871088184783442 63 0.0020904824136583253 64 0.3968115708835075 65 0.5874889061899184 66 0.010452412068291625 67 0.014696724847537316 68 0.010262368212504506 69 0.4072639829517992 70 0.6003485404315135 71 0.0247690492042547 72 0.6085204262303597 73 0.017357338828557004 74 1.0140740144800748 75 0.06417147530411768 >>END_MODULE >>Sequence Length Distribution pass #Length Count 75 1578583.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.36835339861241 #Duplication Level Percentage of deduplicated Percentage of total 1 80.34780602466908 52.52203779023728 2 11.075097707434306 14.479218017274556 3 3.8368534668522534 7.524263800796679 4 1.7035059624441307 4.454215190787652 5 0.8941701014112177 2.922521359376079 6 0.5418093013825782 2.1250309132459004 7 0.3536500881571988 1.6182266759477142 8 0.2395975576715067 1.2529678258652377 9 0.17257640511475184 1.015293189402288 >10 0.7792281033318001 8.721134252561793 >50 0.042570951562882535 1.8756408241154783 >100 0.012936847177652479 1.4061863051096009 >500 1.9748279065335143E-4 0.08326385527974242 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 6.334795192904015E-5 0.0 6 0.0 0.0 0.0 6.334795192904015E-5 6.334795192904015E-5 7 0.0 0.0 0.0 6.334795192904015E-5 6.334795192904015E-5 8 0.0 0.0 0.0 6.334795192904015E-5 6.334795192904015E-5 9 0.0 0.0 0.0 6.334795192904015E-5 6.334795192904015E-5 10 0.0 0.0 0.0 6.334795192904015E-5 6.334795192904015E-5 11 0.0 0.0 0.0 6.334795192904015E-5 6.334795192904015E-5 12 0.0 0.0 0.0 6.334795192904015E-5 6.334795192904015E-5 13 0.0 0.0 0.0 6.334795192904015E-5 6.334795192904015E-5 14 0.0 0.0 0.0 6.334795192904015E-5 1.266959038580803E-4 15 0.0 0.0 0.0 6.334795192904015E-5 3.8008771157424097E-4 16 0.0 0.0 0.0 6.334795192904015E-5 3.8008771157424097E-4 17 0.0 0.0 0.0 6.334795192904015E-5 3.8008771157424097E-4 18 0.0 0.0 0.0 6.334795192904015E-5 3.8008771157424097E-4 19 0.0 0.0 0.0 6.334795192904015E-5 3.8008771157424097E-4 20 0.0 0.0 0.0 6.334795192904015E-5 3.8008771157424097E-4 21 0.0 0.0 0.0 6.334795192904015E-5 3.8008771157424097E-4 22 0.0 0.0 0.0 1.266959038580803E-4 3.8008771157424097E-4 23 0.0 0.0 0.0 3.1673975964520076E-4 6.968274712194417E-4 24 0.0 0.0 0.0 6.968274712194417E-4 7.601754231484819E-4 25 0.0 0.0 0.0 7.601754231484819E-4 7.601754231484819E-4 26 0.0 0.0 0.0 0.0010135672308646424 7.601754231484819E-4 27 0.0 0.0 0.0 0.0010769151827936827 7.601754231484819E-4 28 0.0 0.0 0.0 0.0022171783175164057 7.601754231484819E-4 29 0.0 0.0 0.0 0.0031673975964520078 7.601754231484819E-4 30 0.0 0.0 0.0 0.005891359529400735 7.601754231484819E-4 31 0.0 0.0 0.0 0.012542894481949951 7.601754231484819E-4 32 0.0 6.334795192904015E-5 0.0 0.02071478028079613 8.868713270065622E-4 33 0.0 6.334795192904015E-5 0.0 0.02818983860842287 8.868713270065622E-4 34 0.0 6.334795192904015E-5 0.0 0.03604498464762385 8.868713270065622E-4 35 0.0 6.334795192904015E-5 0.0 0.04504039382154755 8.868713270065622E-4 36 0.0 6.334795192904015E-5 0.0 0.05751994035156846 8.868713270065622E-4 37 0.0 6.334795192904015E-5 0.0 0.07462388737240931 8.868713270065622E-4 38 0.0 6.334795192904015E-5 0.0 0.09717575825914761 8.868713270065622E-4 39 0.0 6.334795192904015E-5 0.0 0.11979097709781494 9.502192789356023E-4 40 0.0 6.334795192904015E-5 0.0 0.1446867222059277 9.502192789356023E-4 41 0.0 6.334795192904015E-5 0.0 0.16844220417931777 9.502192789356023E-4 42 0.0 6.334795192904015E-5 0.0 0.19327460133550153 9.502192789356023E-4 43 0.0 6.334795192904015E-5 0.0 0.21791695463589814 9.502192789356023E-4 44 0.0 6.334795192904015E-5 0.0 0.24585340143660486 9.502192789356023E-4 45 0.0 6.334795192904015E-5 0.0 0.2773373335453378 9.502192789356023E-4 46 0.0 6.334795192904015E-5 0.0 0.3078710463751352 9.502192789356023E-4 47 0.0 6.334795192904015E-5 0.0 0.3387214989645777 9.502192789356023E-4 48 0.0 6.334795192904015E-5 0.0 0.37330948071783365 9.502192789356023E-4 49 0.0 6.334795192904015E-5 0.0 0.40606037186514743 9.502192789356023E-4 50 0.0 6.334795192904015E-5 0.0 0.44128183313769376 9.502192789356023E-4 51 0.0 6.334795192904015E-5 0.0 0.47662999031409814 9.502192789356023E-4 52 0.0 6.334795192904015E-5 0.0 0.5150821971350256 9.502192789356023E-4 53 0.0 1.266959038580803E-4 0.0 0.5574619769755534 0.001203611086651763 54 0.0 1.266959038580803E-4 0.0 0.5946472247579 0.001203611086651763 55 0.0 1.266959038580803E-4 0.0 0.6321492122998917 0.001266959038580803 56 0.0 1.266959038580803E-4 0.0 0.6762393868425037 0.001266959038580803 57 0.0 1.266959038580803E-4 0.0 0.7203295613851156 0.001266959038580803 58 0.0 1.266959038580803E-4 0.0 0.7654333031585923 0.001266959038580803 59 0.0 1.266959038580803E-4 0.0 0.8131976589130885 0.001266959038580803 60 0.0 1.266959038580803E-4 0.0 0.8642561081678949 0.001266959038580803 61 0.0 1.266959038580803E-4 0.0 0.9155679492304174 0.001266959038580803 62 0.0 1.266959038580803E-4 0.0 0.9711241030721857 0.001266959038580803 63 0.0 1.266959038580803E-4 0.0 1.0230694236539986 0.001266959038580803 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2790 0.0 40.024452 1 GGTATCA 1305 0.0 38.205353 1 TATCTCG 905 0.0 30.265226 36 TATCAAC 3755 0.0 29.444218 2 TCAACGC 3695 0.0 29.268442 4 ATCAACG 3750 0.0 29.029404 3 CAACGCA 3785 0.0 28.742735 5 AACGCAG 3885 0.0 28.091572 6 ATCTCGT 1105 0.0 26.23176 37 CCGTCTT 1230 0.0 25.938572 47 TCTCGTA 1130 0.0 25.782211 38 ACGGACT 1265 0.0 25.753412 27 CTCGTAT 1200 0.0 25.723385 39 TATGCCG 1260 0.0 25.445305 43 TCGTATG 1310 0.0 24.887194 40 CCTAATA 140 1.5601472E-8 24.374565 2 ACGCAGA 4490 0.0 24.14301 7 CCTATCT 1135 0.0 24.131405 34 ACTCCTA 1340 0.0 23.80468 31 CGGACTC 1390 0.0 23.687557 28 >>END_MODULE