SRR2079275_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2079275_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1651268
Sequences flagged as poor quality	0
Sequence length	75
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4284	0.25943699024022754	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3181	0.192639837991168	No Hit
GATATAGGCTTACTAGGAGGGTGAATACGTAGGCTTGAATTAATGCTACTGCAAATTCTAGAATTGTGAGTAGAA	2864	0.17344246966573565	No Hit
CTATTAACCCTTGGCCTACTCACCAATATCCTCACAATATATCAATGATGACGAGACGTAATTCGTGAAGGAACC	1976	0.1196656145459126	No Hit
CATTTACACCTACTACCCAACTATCCATAAATCTAAGTATAGCCATTCCACTATGAGCTGGAGCCGTAATTACAG	1777	0.10761426976117748	No Hit
GTGTAAATGTATGTGGTAAAAGGCCTAGGAGATTTGTTGATCCAATAAATATGATTAGGGAAACAATTATTAGGG	1714	0.10379901990470353	No Hit
GTATTGGAATTAGTGAAATTGGAGTTCCTTGTGGAAGGAAGTGGGCAAGTGAGCTTTTTAGTTTGTGTCGGAAGC	1714	0.10379901990470353	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAACGCG	80	3.45608E-11	43.124413	34
GTATCAA	9530	0.0	32.905693	1
CGCGGCA	105	6.4392225E-10	32.856693	37
ACGCGGC	105	6.4392225E-10	32.856693	36
CGATTAC	45	0.004620154	30.670893	25
GTCACCG	45	0.0046249474	30.664392	60
AACGCGG	115	1.7043931E-9	29.999592	35
TGTTTCG	370	0.0	29.835623	66
GTCGGAA	595	0.0	29.569235	67
GTGTCGG	610	0.0	28.842125	65
TTAGTCG	480	0.0	27.31213	39
TGTGTCG	645	0.0	27.277046	64
TAGTCGG	490	0.0	26.754738	40
AGTCGGC	510	0.0	25.705532	41
CCCAACG	135	9.416908E-9	25.559853	32
TCGGCCT	540	0.0	25.555208	43
TATCAAC	12375	0.0	24.894665	2
TGGTCGG	515	0.0	24.785318	10
GTACTTT	5890	0.0	24.718578	14
ATCAACG	12130	0.0	24.572706	3