Basic Statistics
Measure | Value |
---|---|
Filename | SRR2079153_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2620573 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 2290 | 0.0 | 39.269928 | 1 |
GTATCAA | 5545 | 0.0 | 39.23479 | 1 |
GTATACG | 90 | 1.952867E-7 | 30.744661 | 1 |
TATCAAC | 7745 | 0.0 | 28.028318 | 2 |
TCAACGC | 8025 | 0.0 | 26.96437 | 4 |
ATCAACG | 8095 | 0.0 | 26.94437 | 3 |
CAACGCA | 8265 | 0.0 | 26.097864 | 5 |
AACGCAG | 8610 | 0.0 | 25.015867 | 6 |
ACGCAGA | 10035 | 0.0 | 21.147106 | 7 |
CGCAGAG | 10200 | 0.0 | 20.4986 | 8 |
GTACATG | 7005 | 0.0 | 19.84907 | 1 |
AGAGTAC | 9845 | 0.0 | 19.590605 | 11 |
TACATGG | 6910 | 0.0 | 19.428503 | 2 |
GAGTACT | 6675 | 0.0 | 19.33179 | 12 |
CAGAGTA | 10460 | 0.0 | 18.801605 | 10 |
GCAGAGT | 10855 | 0.0 | 18.37172 | 9 |
AGTACTT | 6900 | 0.0 | 18.24824 | 13 |
GTACTTT | 7100 | 0.0 | 17.882694 | 14 |
ACATGGG | 7585 | 0.0 | 17.836035 | 3 |
TACTTTT | 7830 | 0.0 | 16.083279 | 15 |