FastQCFastQC Report
Mon 6 Feb 2017
SRR2077277_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2077277_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13113
Sequences flagged as poor quality0
Sequence length75
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCAGG150.002303782669.01
CTATCCT150.002303782669.04
Produced by FastQC (version 0.11.5)