SRR2074907_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074907_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1738709
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	3606	0.207395257055666	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1981	0.11393510932536727	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1885	0.10841377136714654	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGCGTC	835	45.268524	36
GTAGCGT	845	44.7328	35
CGTCGTG	850	44.46966	39
GCGTCGT	865	43.07425	38
AGCGTCG	895	42.837097	37
AGTAGCG	895	42.535427	34
CGTGGTA	895	42.23376	42
GGTATTC	765	39.881527	45
GTCGTGG	950	39.788647	40
TCGTGGT	960	39.374184	41
GGGTAGT	965	37.771236	24
GTGTAAG	1025	36.3536	12
TAAGCAT	1065	35.74779	15
GTATTCC	870	34.44756	46
GGTGTAA	1100	33.875923	11
TGGTGTA	1085	33.845535	10
TGAGTAG	1125	33.5993	32
GTAGTCT	1085	33.593773	26
GAGTAGC	1145	33.012413	33
TGGTATT	1160	32.12002	44