SRR2074905_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074905_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1743685
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	3763	0.2158073275849709	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2072	0.11882880222058456	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1867	0.10707209157617345	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCGTG	790	46.137524	39
CGTGGTA	785	44.711716	42
TAGCGTC	805	44.607037	36
GTAGCGT	815	44.05971	35
AGCGTCG	855	42.629997	37
GCGTCGT	850	42.563126	38
AGTAGCG	900	40.498493	34
TCGTGGT	910	39.756763	41
GGTATTC	745	38.77819	45
GTCGTGG	980	38.018993	40
GGGTAGT	975	37.107376	24
GTATTCC	855	33.78919	46
GGTAGTC	1105	32.9852	25
TGGTGTA	1050	32.657803	10
GTAAGCA	1140	32.447094	14
AAGCATC	1165	32.213394	16
CTGGGTA	1125	32.159725	22
TGTAAGC	1100	32.155193	13
TAAGCAT	1125	31.918814	15
GTAGTCT	1145	31.597076	26