SRR2074866_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074866_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	351461
Sequences flagged as poor quality	0
Sequence length	60
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	550	0.15648962473787986	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	50	9.742507E-9	43.2	43
CGTCGTG	35	9.643353E-5	38.57143	39
TAGCGGA	30	0.002105123	36.0	34
TCTCGTA	60	4.8625225E-8	36.0	38
AGACGGC	85	9.1858965E-10	31.764708	25
CCACGAG	85	9.1858965E-10	31.764708	20
TCGTATG	60	1.9764466E-6	31.5	40
CCGTCTT	70	1.8834544E-7	30.857143	47
TAGCGTC	45	4.2204242E-4	30.000002	36
CGGCATA	90	1.6952981E-9	30.000002	28
GTAGCGT	45	4.2204242E-4	30.000002	35
GACGGCA	90	1.6952981E-9	30.000002	26
AGTAGCG	45	4.2204242E-4	30.000002	34
CTCGTAT	65	3.688585E-6	29.076923	39
TGCCGTC	85	3.2245225E-8	28.588236	45
ATCTCGT	90	5.615766E-8	27.000002	37
GCCGTCT	90	5.615766E-8	27.000002	46
CGTGGTA	40	0.008602369	27.0	42
CCCACGA	100	5.2223186E-9	27.0	19
GTAGCGG	40	0.008602369	27.0	33