SRR2074849_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074849_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1586129
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	2471	0.1557880853322775	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1759	0.11089892436239424	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCGTG	675	43.99841	39
GTAGCGT	690	43.04192	35
CGTGGTA	685	42.567802	42
GCGTCGT	715	41.91457	38
AGCGTCG	735	41.508705	37
TAGCGTC	725	40.96403	36
AGTAGCG	750	40.678524	34
TCGTGGT	725	40.21923	41
GTCGTGG	860	35.16152	40
GTGTAAG	885	33.559166	12
GGGTAGT	915	33.049026	24
GGTATTC	590	32.950035	45
GTATTCC	585	32.77011	46
CTGGGTA	925	32.10897	22
TATGCCG	295	32.032738	43
TAAGCAT	940	31.595596	15
TGTAAGC	940	30.733898	13
GGTAGTC	990	30.545313	25
GAGTAGC	1035	30.520636	33
CTGAGTA	1010	30.474146	31