SRR2074846_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074846_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1908862
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	3046	0.15957151433681427	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2103	0.11017035280706515	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1976	0.10351717410687625	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGCGT	915	45.442295	35
CGTCGTG	920	44.901848	39
CGTGGTA	915	44.852135	42
AGTAGCG	935	44.759033	34
AGCGTCG	965	43.36756	37
TAGCGTC	970	42.86567	36
GCGTCGT	970	42.58732	38
TCGTGGT	1030	40.106506	41
GGTATTC	770	39.973736	45
GTCGTGG	1080	38.49972	40
GTATTCC	820	36.87778	46
GGGTAGT	1125	35.999737	24
GGTAGTC	1175	35.157192	25
GAGTAGC	1205	34.730038	33
GTTTCAT	1225	33.94439	2
TAAGCAT	1215	33.55531	15
GTGTAAG	1215	33.333088	12
TGGTATT	1205	33.161583	44
GTAGTCT	1240	32.661053	26
CTGGGTA	1210	32.578278	22