SRR2074814_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074814_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2459786
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	3939	0.16013588173930576	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2772	0.11269273018059295	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2623	0.10663529266367075	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCGTG	765	42.705353	39
CGTGGTA	790	41.353916	42
GTAGCGT	805	40.583347	35
AGCGTCG	865	39.953262	37
TATCTCG	520	38.4226	36
GCGTCGT	865	38.080452	38
AGTAGCG	880	37.738163	34
TAGCGTC	875	37.336678	36
TATGCCG	450	37.19954	43
TCTCGTA	535	35.831333	38
CTCGTAT	540	34.499573	39
GGTATTC	755	33.61616	45
TCGTGGT	980	33.611828	41
GTCGTGG	1085	30.856758	40
GTATTCC	780	30.115622	46
CTGGGTA	1105	29.809582	22
GGGTAGT	1125	29.75963	24
TGGTGTA	1175	29.64279	10
GACCCTA	740	29.553686	26
TAAGCAT	1240	28.959318	15