SRR2074804_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074804_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2801595
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	6188	0.22087418060069355	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2896	0.10336968762437113	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGCGT	1190	40.612423	35
TAGCGTC	1230	39.950214	36
CGTCGTG	1210	39.71801	39
AGCGTCG	1275	39.38725	37
AGTAGCG	1270	38.904533	34
CGTGGTA	1240	38.757095	42
GCGTCGT	1320	36.612717	38
TCGTGGT	1370	35.276485	41
TATGCCG	500	35.099117	43
GGTATTC	1220	34.302418	45
GTCGTGG	1515	32.0784	40
GGGTAGT	1580	31.44225	24
CCGTCTT	525	30.856367	47
GTGTAAG	1620	30.666443	12
GTATTCC	1335	30.336317	46
TAAGCAT	1635	29.725615	15
GAGTAGC	1730	28.872107	33
GGTGTAA	1755	28.769022	11
CTGGGTA	1775	28.444355	22
GCCGTCT	610	27.884546	46