SRR2074788_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074788_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2364536
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	6486	0.27430328825613143	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2798	0.11833188414132836	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2398	0.10141524595100265	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGCGT	1305	46.551193	35
TAGCGTC	1310	46.37352	36
CGTCGTG	1325	46.052307	39
CGTGGTA	1350	45.399487	42
AGCGTCG	1365	45.09839	37
AGTAGCG	1385	44.44715	34
GCGTCGT	1390	43.70454	38
TCGTGGT	1480	41.77655	41
GGTATTC	1215	40.666206	45
GTCGTGG	1535	40.27967	40
GTATTCC	1260	38.785275	46
CTGGGTA	1645	37.422066	22
GGGTAGT	1675	36.913013	24
GTGTAAG	1690	36.58538	12
GAGTAGC	1720	36.575165	33
TGGTGTA	1810	35.353188	10
TATGCCG	515	35.125816	43
GGTAGTC	1755	34.92268	25
TGGTATT	1715	34.792606	44
GTAAGCA	1785	34.638996	14