SRR2074779_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074779_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2438854
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	4152	0.17024389323838163	No Hit
ATAAAGAATATTGAGGCGCCATTGGCGTGAAGGTAGCGGATGATTCAGCCATAATTTACG	3202	0.13129117200127602	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCGTG	835	43.005566	39
ATTTACG	635	41.243687	54
TAGCGTC	885	41.18603	36
AGCGTCG	920	40.4996	37
GTAGCGT	915	39.540592	35
CGTGGTA	920	39.3257	42
GCGTCGT	935	38.98357	38
TAGCGGA	705	38.68047	34
ATTGGCG	730	37.725655	21
GGTAGCG	735	37.469017	32
AGCGGAT	800	35.43715	35
TATGCCG	395	34.860416	43
AGTAGCG	1055	34.805344	34
TCGTGGT	1085	33.096447	41
GTAGCGG	860	32.33689	33
GGGTAGT	1120	32.303253	24
GCGTGAA	840	31.821115	25
GTCGTGG	1130	31.778448	40
GGTATTC	975	31.292	45
TTGGCGT	885	30.508171	22