SRR2074778_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074778_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2578380
Sequences flagged as poor quality	0
Sequence length	60
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	4221	0.1637074442091546	No Hit
ATAAAGAATATTGAGGCGCCATTGGCGTGAAGGTAGCGGATGATTCAGCCATAATTTACG	2736	0.1061131408093454	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGGTA	870	41.27509	42
AGCGTCG	920	41.08619	37
GTAGCGT	910	40.94429	35
TAGCGGA	615	40.828506	34
GCGTCGT	900	40.79924	38
CGTCGTG	925	39.40467	39
TAGCGTC	935	39.27199	36
ATTGGCG	640	39.233643	21
AGTAGCG	1015	37.240685	34
GGTAGCG	685	37.050404	32
ATTTACG	650	36.969257	54
GTAGCGG	730	35.13633	33
GGGTAGT	1090	34.43055	24
AGCGGAT	750	33.11938	35
TCGTGGT	1120	32.7851	41
GGTATTC	925	32.691917	45
GTCGTGG	1125	32.639393	40
GCGTGAA	780	32.537853	25
GTAGTCT	1190	31.764112	26
TTGGCGT	825	31.090328	22