Basic Statistics
Measure | Value |
---|---|
Filename | SRR2074777_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 882506 |
Sequences flagged as poor quality | 0 |
Sequence length | 60 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCGACGG | 280 | 0.0 | 42.427635 | 29 |
CTCGACG | 315 | 0.0 | 39.427704 | 28 |
ATCGCGT | 35 | 9.6532356E-5 | 38.572765 | 37 |
CGACGGC | 305 | 0.0 | 37.17951 | 30 |
GACGGCA | 310 | 0.0 | 36.579838 | 31 |
AGACTCG | 330 | 0.0 | 35.18104 | 25 |
ACGGCAT | 295 | 0.0 | 34.778893 | 32 |
ACTCGAC | 320 | 0.0 | 34.592987 | 27 |
TAGCGGA | 150 | 0.0 | 34.199245 | 34 |
ATTGGCG | 145 | 0.0 | 33.516502 | 21 |
ATTTACG | 130 | 0.0 | 33.230038 | 54 |
GACTCGA | 345 | 0.0 | 32.868843 | 26 |
GGTAGCG | 160 | 0.0 | 32.061794 | 32 |
GCGTCGT | 145 | 0.0 | 31.65627 | 38 |
CGGCATC | 320 | 0.0 | 31.218061 | 33 |
CTCGTAT | 130 | 0.0 | 31.154924 | 39 |
CGTCGTG | 150 | 0.0 | 30.601063 | 39 |
TAACGCA | 125 | 0.0 | 30.24276 | 4 |
CGTATGA | 45 | 4.2246876E-4 | 30.001038 | 41 |
CATTCCG | 45 | 4.22609E-4 | 29.99934 | 9 |