SRR2074761_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074761_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2378483
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	4014	0.1687630308898571	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2479	0.1042260970542989	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCGTG	855	40.73586	39
TAGCGTC	875	40.113316	36
GTAGCGT	900	39.299053	35
CGTGGTA	885	39.049904	42
AGCGTCG	940	37.91398	37
AGTAGCG	960	37.686592	34
GCGTCGT	970	36.184692	38
GGTATTC	840	35.35629	45
TCGTGGT	1015	34.58045	41
TATGCCG	430	33.90616	43
GTCGTGG	1095	32.79373	40
CTCGTAT	495	32.726486	39
GTGTAAG	1200	31.050554	12
GTATTCC	940	31.020529	46
TCTCGTA	545	30.714857	38
CTGGGTA	1200	30.600546	22
TCGTATG	540	30.499266	40
TAAGCAT	1290	29.722088	15
GGGTAGT	1300	28.868534	24
ATCTGGG	1325	28.12185	20