SRR2074752_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074752_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2141578
Sequences flagged as poor quality	0
Sequence length	60
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	2384	0.11131978382295671	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2231	0.10417551917324515	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGCGT	630	42.428295	35
CGTCGTG	615	42.146065	39
AGTAGCG	665	41.413265	34
CGTGGTA	645	41.02299	42
TAGCGTC	660	40.09065	36
GCGTCGT	685	38.627487	38
AGCGTCG	715	37.76199	37
TCGTGGT	720	35.999767	41
CCGTCTT	440	31.908884	47
GGTATTC	585	31.38441	45
TATGCCG	500	31.319798	43
CTCGTAT	485	31.175056	39
TCGTATG	505	31.009699	40
GGGTAGT	865	30.901533	24
GCCGTCT	490	30.856943	46
TCTCGTA	530	30.56584	38
GTCGTGG	885	29.89811	40
GAGTAGC	950	29.273495	33
CGTATGC	550	28.96345	41
TGAGTAG	905	28.939041	32