SRR2074743_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2074743_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2173429
Sequences flagged as poor quality	0
Sequence length	60
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTTCATGTGGTGTAAGCATCTGGGTAGTCTGAGTAGCGTCGTGGTATTCCTGAAAGGC	2759	0.12694226496471703	No Hit
CTTATACACATCTCCGAGCCCACGAGACGTTCATTAATCTCGTATGCCGTCTTCTGCTTG	2203	0.10136056894428114	RNA PCR Primer, Index 45 (96% over 30bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGGTA	650	38.630173	42
GTAGCGT	645	37.67384	35
TAGCGTC	660	37.226704	36
CGTCGTG	670	37.07406	39
AGCGTCG	700	36.642296	37
TATGCCG	555	36.485928	43
GCGTCGT	690	36.390747	38
AGTAGCG	705	35.99945	34
TCGTATG	695	32.63259	40
CTCGTAT	675	31.999508	39
CCGTCTT	575	30.99083	47
TCTCGTA	700	30.85667	38
GTCGTGG	840	30.535246	40
TCGTGGT	835	30.071394	41
GCCGTCT	625	29.37555	46
ATGCCGT	690	28.956078	44
CGTATGC	760	28.775873	41
TGCCGTC	690	28.56478	45
GTGTAAG	960	28.125216	12
ACGTTCA	870	27.930605	27