SRR2049545_2.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	SRR2049545_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	69743960
Sequences flagged as poor quality	0
Sequence length	100
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	47455	0.0	10.399072	94
AGATCGG	56265	0.0	9.7480955	94
ATCGGAA	45710	0.0	9.438842	94
TAGATCG	18385	0.0	9.228494	94
AGCGTCG	17545	0.0	9.000635	94
GCGTCGT	15785	0.0	8.545246	94
TCGGAAG	49345	0.0	7.6101093	94
AAGAGCG	35455	0.0	7.0654035	94
AGAGCGT	28310	0.0	6.8896236	94
AAGATCG	25600	0.0	6.7928033	94
CGTCGTG	15680	0.0	6.77407	94
GAGCGTC	25990	0.0	6.654705	94
CGGAAGA	54660	0.0	6.629366	94
GTCGTGT	16230	0.0	6.3128467	94
CAGATCG	26835	0.0	6.1474185	94
TCGTGTA	14115	0.0	5.9601803	94
GAGATCG	33970	0.0	5.1329336	94