Basic Statistics
Measure | Value |
---|---|
Filename | SRR2049435_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7068222 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 6280 | 0.0 | 36.765022 | 1 |
TACCTGG | 6155 | 0.0 | 33.601074 | 2 |
GTATCAA | 9970 | 0.0 | 32.779522 | 1 |
TATAACG | 885 | 0.0 | 30.804436 | 2 |
GTACCTG | 7050 | 0.0 | 30.281662 | 1 |
TCAACGC | 10430 | 0.0 | 30.01235 | 4 |
ATCAACG | 10565 | 0.0 | 29.6299 | 3 |
CAACGCA | 11570 | 0.0 | 27.177853 | 5 |
ATAACGC | 980 | 0.0 | 26.85885 | 3 |
TAACGCA | 970 | 0.0 | 26.165684 | 4 |
AACGCAG | 12250 | 0.0 | 25.745396 | 6 |
TATCAAC | 12475 | 0.0 | 24.98052 | 2 |
GTACATG | 22480 | 0.0 | 24.055506 | 1 |
ACCTGGG | 8595 | 0.0 | 23.89797 | 3 |
ACGCAGA | 14125 | 0.0 | 22.328024 | 7 |
TACATGG | 23190 | 0.0 | 22.295666 | 2 |
ACATGGG | 23230 | 0.0 | 21.02286 | 3 |
CGCAGAG | 14965 | 0.0 | 20.885397 | 8 |
GTATAAC | 2210 | 0.0 | 19.575302 | 1 |
TATCACG | 1190 | 0.0 | 18.959322 | 2 |