SRR2049418_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2049418_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8081789
Sequences flagged as poor quality	0
Sequence length	101
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	63749	0.7887981237817518	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	45038	0.557277602768397	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30927	0.38267517253914946	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16716	0.20683539251024743	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	16230	0.2008218724839265	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10860	0.1343761882424795	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9452	0.116954303063344	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9325	0.11538286881778279	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	22790	57.985043	1
TATAACG	820	49.235237	2
GTATCAA	46640	47.949173	1
TACCTGG	7480	41.274586	2
GTACCTG	8220	38.312893	1
ATCAACG	61635	35.997715	3
TATCAAC	62130	35.71679	2
TCAACGC	62265	35.604073	4
GTGGTAT	8485	34.933006	1
CAACGCA	64450	34.411118	5
AACGCAG	67945	32.780876	6
TGGTATC	8970	32.406338	2
ACCTGGG	10190	29.553404	3
CGCAGAG	75430	29.06973	8
ACGCAGA	75880	29.059923	7
ATAACGC	1560	28.926205	3
GTACACG	850	28.50063	1
GTACATG	53005	27.754126	1
GCAGAGT	78765	27.17548	9
TACATGG	51435	27.121655	2