##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224566_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 896063 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10489664231198 34.0 31.0 34.0 30.0 34.0 2 32.27658657929186 34.0 31.0 34.0 31.0 34.0 3 32.42258077836045 34.0 31.0 34.0 31.0 34.0 4 35.71542849107708 37.0 35.0 37.0 35.0 37.0 5 35.731947418875684 37.0 37.0 37.0 35.0 37.0 6 35.829128085860035 37.0 37.0 37.0 35.0 37.0 7 35.79107160992029 37.0 37.0 37.0 35.0 37.0 8 35.821874131617975 37.0 37.0 37.0 35.0 37.0 9 37.54433561033097 39.0 38.0 39.0 35.0 39.0 10-11 37.60820165546396 39.0 38.5 39.0 35.0 39.0 12-13 37.615389208124874 39.0 38.0 39.0 35.0 39.0 14-15 39.09272841306917 41.0 40.0 41.0 36.0 41.0 16-17 38.92766189430877 41.0 39.5 41.0 35.5 41.0 18-19 39.01230717036637 41.0 39.5 41.0 36.0 41.0 20-21 39.082192881527305 41.0 40.0 41.0 36.0 41.0 22-23 39.030853299377384 41.0 39.5 41.0 36.0 41.0 24-25 38.97379202131992 41.0 39.0 41.0 35.5 41.0 26-27 38.811031144015544 41.0 39.0 41.0 35.0 41.0 28-29 38.719367946226996 41.0 39.0 41.0 35.0 41.0 30-31 38.63471374222571 41.0 39.0 41.0 35.0 41.0 32-33 38.43589680636295 40.0 39.0 41.0 34.0 41.0 34-35 38.43317992150105 40.0 38.0 41.0 34.0 41.0 36-37 38.43454031691968 40.0 38.0 41.0 34.0 41.0 38-39 38.33031215439093 40.0 38.0 41.0 34.0 41.0 40-41 38.241230248319596 40.0 38.0 41.0 34.0 41.0 42-43 38.0915744763482 40.0 38.0 41.0 33.0 41.0 44-45 37.92305340137915 40.0 38.0 41.0 33.0 41.0 46-47 37.754057471405474 40.0 37.5 41.0 33.0 41.0 48-49 37.544480689415806 40.0 37.0 41.0 32.0 41.0 50-51 36.2853398700761 38.5 35.5 40.0 30.0 40.5 52-53 36.65609337736298 39.0 36.0 40.0 31.0 40.5 54-55 37.15206520077271 40.0 36.0 41.0 32.0 41.0 56-57 37.01704121250403 39.5 35.5 41.0 31.0 41.0 58-59 36.881033476440834 39.0 35.0 41.0 31.0 41.0 60-61 36.634787955757574 39.0 35.0 41.0 31.0 41.0 62-63 36.33977633269089 38.5 35.0 41.0 30.5 41.0 64-65 36.077304274364636 38.0 35.0 40.5 30.0 41.0 66-67 35.80841190853768 37.0 35.0 40.0 30.0 41.0 68-69 35.470933405352085 37.0 35.0 40.0 29.5 41.0 70-71 35.1410810400608 36.0 35.0 39.0 29.0 41.0 72-73 34.793160748742 36.0 34.5 39.0 29.0 41.0 74-75 34.492629424493586 35.0 34.0 38.5 29.0 40.0 76-77 34.11777687506347 35.0 34.0 37.0 28.0 39.0 78-79 33.85873426310427 35.0 34.0 37.0 28.0 39.0 80-81 33.5341571965364 35.0 34.0 36.0 28.0 39.0 82-83 33.26931700114835 35.0 34.0 36.0 27.0 37.0 84-85 33.04271072458075 35.0 34.0 35.5 27.0 37.0 86-87 32.81339704909142 35.0 33.5 35.0 27.0 36.5 88-89 32.65465430444065 35.0 33.0 35.0 26.5 36.0 90-91 32.48454740347498 35.0 33.0 35.0 26.0 36.0 92-93 32.350643872138455 35.0 33.0 35.0 25.5 36.0 94-95 32.21497037596687 35.0 33.0 35.0 25.0 35.0 96-97 32.08602799133543 35.0 33.0 35.0 25.0 35.0 98-99 32.03329899794992 35.0 33.0 35.0 25.0 35.0 100-101 30.832120062986643 34.0 31.0 35.0 21.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 4.0 7 107.0 8 346.0 9 336.0 10 463.0 11 861.0 12 1611.0 13 1915.0 14 1995.0 15 2087.0 16 2218.0 17 2402.0 18 2843.0 19 3090.0 20 3719.0 21 4529.0 22 5110.0 23 5021.0 24 4849.0 25 5061.0 26 5469.0 27 5942.0 28 6592.0 29 7574.0 30 9448.0 31 11525.0 32 15173.0 33 20934.0 34 33188.0 35 57224.0 36 118882.0 37 221173.0 38 269550.0 39 64807.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.571788632698066 18.754002787560818 13.141661515901056 24.53254706384006 2 15.679941789742227 19.953753200113386 39.34671931183333 25.019585698311055 3 19.30658816019427 25.570552037693822 28.664422774316954 26.45843702779495 4 12.465418168142195 16.998469973651407 39.168339726113004 31.367772132093393 5 13.770683534528263 38.42877119131132 34.40796015458735 13.392585119573067 6 30.25166757248095 37.29581513799811 19.239830235150876 13.212687054370061 7 27.336805559430534 31.28619304669426 22.598522648519133 18.778478745356075 8 25.73412806912014 34.615423245910165 20.919957636907228 18.73049104806247 9 26.556838079465393 15.490763484263942 19.886213357766138 38.066185078504525 10-11 25.468242746324755 25.26183984831424 28.401909240756506 20.868008164604497 12-13 26.35947472443344 22.776021328857457 28.1553305961746 22.709173350534506 14-15 23.324856066957754 24.5457610504963 25.466798551794124 26.66258433075182 16-17 23.428635246817066 27.132622291713197 26.234755416573595 23.203987044896135 18-19 23.227929172422453 26.813624122678497 27.076897316756664 22.881549388142382 20-21 24.41223640162576 25.366513174824956 26.912447129605805 23.308803293943484 22-23 24.021744956849574 26.1392874372398 26.303558346882983 23.53540925902764 24-25 23.529917334708482 25.960540326955407 26.725746789269362 23.78379554906675 26-27 23.477199705824255 26.608229555287966 26.73126777916285 23.18330295972493 28-29 23.419502869775897 26.640035354656984 26.72870099535412 23.211760780212998 30-31 23.527530988334526 25.98645407744768 26.907873665132918 23.578141269084874 32-33 23.434457175444138 26.07338992905633 26.954912768410257 23.53724012708928 34-35 23.905908401529803 25.954871476670725 26.640704950433175 23.4985151713663 36-37 23.441221137161378 25.900216943953446 27.117826742877043 23.54073517600813 38-39 23.47143308345024 26.205861706057572 26.53755110103692 23.785154109455267 40-41 24.067573019675596 25.908292164639064 26.732726307841947 23.291408507843396 42-43 23.89057967860487 26.06779229736471 26.6862976838971 23.35533034013332 44-45 23.84521071685082 26.04158586355207 26.398300804673458 23.714902614923655 46-47 23.725396540198624 25.905377188880692 26.231526131533162 24.137700139387523 48-49 23.505545927016293 26.123609612270567 26.575642560846724 23.795201899866417 50-51 23.58249364163011 26.277226043258118 26.308139048258884 23.832141266852886 52-53 24.001772196820983 26.27069748444027 25.79673527419389 23.93079504454486 54-55 23.80050286642792 25.78981611783993 26.27426866191328 24.13541235381887 56-57 23.81485666457418 26.281258282764874 26.144549068842853 23.75933598381809 58-59 23.99641488047834 26.227962034789726 26.351242374505468 23.424380710226465 60-61 23.875181867851904 26.312029703826774 26.125125082109115 23.687663346212208 62-63 23.709670307220957 26.116153534009424 26.4280575158087 23.746118642960923 64-65 24.27156552909579 25.774072405490394 25.986770302460876 23.96759176295294 66-67 23.474620161891625 26.13103131125071 25.94356786634342 24.450780660514248 68-69 23.625961567434434 26.186719014176457 26.533792824834862 23.653526593554247 70-71 24.018177293337633 25.705614448984054 26.333862685994173 23.942345571684136 72-73 23.75603054695931 25.914305132563225 26.503270417370207 23.82639390310726 74-75 23.846593375688986 25.812135977046257 26.497969450808707 23.84330119645605 76-77 23.782814378006904 25.616669810046837 26.072720333280134 24.52779547866612 78-79 23.827188880939122 25.265960712264608 26.53546198639808 24.37138842039819 80-81 23.695873560369026 26.057962663950995 26.143832450069343 24.102331325610635 82-83 23.630557602554656 26.226915432884486 26.236182756079586 23.906344208481276 84-85 23.616393519484973 25.61663241396171 26.67731272738233 24.08966133917099 86-87 23.57027405023184 26.47296765386537 26.092418325102802 23.864339970799985 88-89 23.77095848325275 25.81899819036147 25.949502042402028 24.46054128398375 90-91 23.51397167386668 25.857389491587085 26.24424845128077 24.384390383265462 92-93 23.554725972551218 25.852801098174456 26.55975090189251 24.03272202738182 94-95 23.79793608261919 25.704944853207866 26.469511630320635 24.027607433852307 96-97 23.82611490486718 26.04777789061707 26.379395198775086 23.746712005740665 98-99 23.17848792763837 26.30681152384619 26.296153695922687 24.218546852592755 100-101 23.750773884057793 25.79941036873447 26.057995108550326 24.391820638657414 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1.0 1 0.5 2 1.0 3 3.5 4 4.5 5 4.5 6 8.0 7 10.5 8 25.0 9 35.5 10 34.5 11 41.0 12 50.0 13 54.5 14 56.5 15 75.5 16 93.5 17 112.0 18 141.0 19 163.5 20 186.0 21 224.5 22 293.0 23 411.0 24 556.5 25 738.5 26 1063.5 27 1529.0 28 2065.0 29 2896.5 30 4242.5 31 6014.5 32 8214.5 33 10680.5 34 13451.0 35 16167.5 36 18527.0 37 20743.5 38 22627.5 39 24496.5 40 25817.0 41 26972.5 42 28716.5 43 30267.0 44 31752.5 45 33567.0 46 35772.0 47 36927.0 48 37863.5 49 40021.5 50 42226.0 51 41429.0 52 39394.5 53 39000.0 54 39073.5 55 37339.0 56 31621.0 57 26633.5 58 24292.0 59 22296.5 60 18388.0 61 13821.5 62 10951.5 63 7974.5 64 5112.0 65 3276.5 66 2423.5 67 2014.0 68 1562.5 69 1054.0 70 653.5 71 460.0 72 335.0 73 258.5 74 195.0 75 143.0 76 111.0 77 74.5 78 46.5 79 31.5 80 28.0 81 20.0 82 15.0 83 11.0 84 7.0 85 8.0 86 10.0 87 9.0 88 7.0 89 4.5 90 3.5 91 4.0 92 3.0 93 2.0 94 2.0 95 3.5 96 4.5 97 4.0 98 2.5 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15333743274747424 2 1.1159929603164062E-4 3 1.1159929603164062E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03727416487456797 16-17 0.07399033326897773 18-19 0.025165641255134964 20-21 0.04000834762734317 22-23 0.06595518395469961 24-25 0.017967486661094142 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.023380052518628715 38-39 0.004910369025392188 40-41 0.006082161633724415 42-43 0.0035711774730125 44-45 0.012220122915464648 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 5.579964801582031E-5 58-59 0.015344903204350587 60-61 0.016907293348793557 62-63 0.030634006760685353 64-65 0.04759709975749473 66-67 0.0172978908849043 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.017855887365062502 80-81 0.05814323323248476 82-83 0.049438488142016804 84-85 0.03013180992854297 86-87 0.05752943710431074 88-89 0.033926185993618754 90-91 0.0 92-93 0.003403778528965039 94-95 0.0 96-97 0.0 98-99 8.92794368253125E-4 100-101 0.0467043053892416 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 896063.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.78060194376187 #Duplication Level Percentage of deduplicated Percentage of total 1 79.28096401264474 50.56587607408204 2 13.448717683258288 17.155346184198567 3 3.774506597677734 7.222209085217596 4 1.4550224759860306 3.7120883744036735 5 0.7051737084051833 2.24882017984987 6 0.3599065791577027 1.3773034957319077 7 0.21223019337431437 0.9475318638838328 8 0.1350594687615298 0.689133937265206 9 0.09487192367626622 0.5445889559671404 >10 0.4302709319537785 5.216091279689348 >50 0.04776427408894157 2.10165200706162 >100 0.05198757010897772 6.334411469717654 >500 0.002643435679950517 1.161990640830409 >1k 8.811452266501722E-4 0.7229564521011018 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1588 0.17721968209824532 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1317 0.1469762728736707 No Hit GTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTC 1267 0.1413963080720887 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1244 0.13882952426336095 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1016 0.11338488476814688 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 0.0 14-15 0.0 0.0 0.0 0.0 0.0 16-17 0.0 0.0 0.0 0.0 0.0 18-19 0.0 0.0 0.0 5.579964801582032E-5 0.0 20-21 0.0 0.0 0.0 1.6739894404746094E-4 0.0 22-23 0.0 0.0 0.0 2.2319859206328127E-4 0.0 24-25 0.0 0.0 0.0 3.347978880949219E-4 0.0 26-27 0.0 0.0 0.0 6.137961281740235E-4 0.0 28-29 0.0 0.0 0.0 9.485940162689455E-4 0.0 30-31 0.0 0.0 0.0 0.0029573813448384766 0.0 32-33 0.0 0.0 0.0 0.007700351426183204 0.0 34-35 0.0 0.0 0.0 0.014284709892050001 0.0 36-37 0.0 0.0 0.0 0.022822056038470512 0.0 38-39 0.0 0.0 0.0 0.04034314551543809 0.0 40-41 0.0 0.0 0.0 0.06087741598525996 0.0 42-43 0.0 0.0 0.0 0.08252767941539824 0.0 44-45 0.0 0.0 0.0 0.10813971785465978 0.0 46-47 0.0 0.0 0.0 0.13693233623082307 0.0 48-49 0.0 0.0 0.0 0.16929613207999883 0.0 50-51 0.0 0.0 0.0 0.20154832863314298 0.0 52-53 0.0 0.0 0.0 0.23497231779461936 0.0 54-55 0.0 0.0 0.0 0.2724696812612506 0.0 56-57 0.0 0.0 0.0 0.3185601905223182 0.0 58-59 0.0 0.0 0.0 0.3674406821841768 0.0 60-61 0.0 0.0 0.0 0.4244679224563451 0.0 62-63 0.0 0.0 0.0 0.4871867268261272 0.0 64-65 0.0 0.0 0.0 0.5492917350677352 0.0 66-67 0.0 0.0 0.0 0.6174231052950518 0.0 68-69 0.0 0.0 0.0 0.6950962153330736 0.0 70-71 0.0 0.0 0.0 0.7841524535663229 0.0 72-73 0.0 0.0 0.0 0.8874376020436063 0.0 74-75 0.0 0.0 0.0 0.9866493762157348 0.0 76-77 0.0 0.0 0.0 1.088985930676749 0.0 78-79 0.0 0.0 0.0 1.2138655429361551 0.0 80-81 0.0 0.0 0.0 1.3528066664955478 0.0 82-83 0.0 0.0 0.0 1.5036331150823101 0.0 84-85 0.0 0.0 0.0 1.6552407587412938 0.0 86-87 0.0 0.0 0.0 1.810196381281227 0.0 88-89 0.0 0.0 0.0 1.9952838137497029 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1460 0.0 44.933983 1 CCGTGCG 245 0.0 40.722565 9 GGTATCA 755 0.0 40.297836 1 AAACCGT 300 0.0 39.56929 6 ATCAACG 1790 0.0 36.34185 3 ACCGTGC 330 0.0 35.976097 8 TCAACGC 1845 0.0 35.515854 4 AACCGTG 335 0.0 34.01778 7 ACGCAGA 2140 0.0 31.285625 7 TATCAAC 2180 0.0 30.05814 2 CAACGCA 2205 0.0 29.932686 5 CGCAGAG 2220 0.0 29.733759 8 AACGCAG 2315 0.0 29.125732 6 GTCTAAT 515 0.0 28.615623 1 TACATGG 2980 0.0 26.609686 2 GTACCGT 90 8.9645525E-4 26.379528 6 TCGCACC 830 0.0 26.346834 1 GTACATG 3115 0.0 26.09677 1 TGTACCG 110 9.497225E-5 25.899899 5 AATGCGG 185 8.996722E-9 25.666565 7 >>END_MODULE