##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224563_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 987148 Sequences flagged as poor quality 0 Sequence length 101 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24302232289383 34.0 31.0 34.0 31.0 34.0 2 32.405117571022785 34.0 31.0 34.0 31.0 34.0 3 32.550241706410795 34.0 31.0 34.0 31.0 34.0 4 35.82955443358038 37.0 37.0 37.0 35.0 37.0 5 35.832335171625736 37.0 37.0 37.0 35.0 37.0 6 35.92521182234072 37.0 37.0 37.0 35.0 37.0 7 35.898199662056754 37.0 37.0 37.0 35.0 37.0 8 35.93652015705852 37.0 37.0 37.0 35.0 37.0 9 37.67573352729276 39.0 39.0 39.0 35.0 39.0 10-11 37.74883806683496 39.0 39.0 39.0 35.0 39.0 12-13 37.73347107019414 39.0 39.0 39.0 35.0 39.0 14-15 39.224191813183026 41.0 40.0 41.0 36.0 41.0 16-17 39.05356744885266 41.0 40.0 41.0 36.0 41.0 18-19 39.1181687041862 41.0 40.0 41.0 36.0 41.0 20-21 39.17709958385166 41.0 40.0 41.0 36.0 41.0 22-23 39.129991146211104 41.0 40.0 41.0 36.0 41.0 24-25 39.057335374229595 41.0 39.5 41.0 35.5 41.0 26-27 38.871415937630424 41.0 39.0 41.0 35.0 41.0 28-29 38.79021788019628 41.0 39.0 41.0 35.0 41.0 30-31 38.722908317699066 41.0 39.0 41.0 35.0 41.0 32-33 38.533586149189375 41.0 39.0 41.0 35.0 41.0 34-35 38.52758198365392 40.0 38.0 41.0 35.0 41.0 36-37 38.49833611575974 40.0 38.0 41.0 35.0 41.0 38-39 38.355152925397206 40.0 38.0 41.0 34.5 41.0 40-41 38.24220684233772 40.0 38.0 41.0 34.0 41.0 42-43 38.065987065769264 40.0 38.0 41.0 33.5 41.0 44-45 37.85932555199423 40.0 37.0 41.0 33.0 41.0 46-47 37.65122453775928 40.0 37.0 41.0 33.0 41.0 48-49 37.395621527876266 40.0 36.0 41.0 32.5 41.0 50-51 36.03205294444197 38.0 34.5 40.0 30.0 40.5 52-53 36.32725589273341 38.5 35.0 40.0 31.0 40.5 54-55 36.70851179357098 39.0 35.0 41.0 31.5 41.0 56-57 36.488161856175566 38.5 35.0 41.0 31.0 41.0 58-59 36.27491014518593 37.0 35.0 41.0 31.0 41.0 60-61 35.97532436878766 37.0 35.0 40.0 31.0 41.0 62-63 35.650742847070546 36.0 35.0 40.0 30.5 41.0 64-65 35.37085725747305 36.0 35.0 39.5 30.0 41.0 66-67 35.10837280731967 35.0 35.0 39.0 30.0 41.0 68-69 34.78999856151256 35.0 34.5 39.0 29.5 41.0 70-71 34.49563793878932 35.0 34.0 37.5 29.0 40.5 72-73 34.19033822689202 35.0 34.0 37.0 29.0 39.5 74-75 33.94035240916256 35.0 34.0 36.5 29.0 39.0 76-77 33.66303127798466 35.0 34.0 36.0 29.0 39.0 78-79 33.482298500326195 35.0 34.0 36.0 29.0 37.5 80-81 33.233466511607176 35.0 34.0 35.0 28.5 37.0 82-83 33.03724669451795 35.0 34.0 35.0 27.5 37.0 84-85 32.871550669200566 35.0 33.5 35.0 27.0 36.0 86-87 32.704988512360856 35.0 33.0 35.0 27.0 36.0 88-89 32.607632290193564 35.0 33.0 35.0 27.0 36.0 90-91 32.468461669374804 35.0 33.0 35.0 27.0 35.0 92-93 32.363414604496995 35.0 33.0 35.0 26.0 35.0 94-95 32.25019247367163 35.0 33.0 35.0 25.0 35.0 96-97 32.132740480657404 35.0 33.0 35.0 25.0 35.0 98-99 32.10723771916673 35.0 33.0 35.0 25.0 35.0 100-101 30.799426732364346 34.0 30.5 35.0 21.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 7.0 7 146.0 8 555.0 9 428.0 10 513.0 11 1083.0 12 1652.0 13 1963.0 14 1888.0 15 2053.0 16 2162.0 17 2242.0 18 2564.0 19 2897.0 20 3253.0 21 4203.0 22 5191.0 23 5306.0 24 5287.0 25 5774.0 26 6018.0 27 6407.0 28 7013.0 29 8043.0 30 10114.0 31 12751.0 32 17190.0 33 24604.0 34 42397.0 35 77777.0 36 173967.0 37 283593.0 38 225918.0 39 42187.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.064343288638945 17.019981619101525 12.65289519438916 25.262779897870374 2 17.385336342676073 18.535315879685722 36.34379039414556 27.735557383492647 3 21.40651655070972 24.062248011443067 26.516591230494313 28.0146442073529 4 13.91199698525449 15.29973215769064 35.72189783092302 35.06637302613185 5 15.252322853310748 37.70093238298614 32.26648891554255 14.780255848160559 6 32.81544408741141 34.14634887575115 18.113190727226314 14.925016309611122 7 29.789251459760845 29.36854453435554 20.164250953251184 20.677953052632432 8 28.04108401171861 32.65184146652781 19.112939498433875 20.194135023319703 9 27.978985927135547 14.589808215181513 18.255216036501114 39.17598982118183 10-11 28.079224189280634 23.316260580986842 25.62356404510772 22.9809511846248 12-13 28.212537532365968 21.137863825890342 25.81644292446523 24.833155717278462 14-15 25.243224646291246 22.806240616704507 23.21579945550918 28.734735281495066 16-17 25.44872103543795 25.4268748558583 24.236688909895914 24.887715198807836 18-19 25.404020267001176 25.15769949980976 24.65715462530315 24.78112560788591 20-21 26.4933896240507 23.325668688727603 24.415777750303512 25.765163936918185 22-23 26.556040992995513 24.29797974678412 23.651812956787058 25.494166303433314 24-25 25.77656915932402 23.937737687129143 24.437846351339505 25.847846802207325 26-27 25.585677122376786 25.275237350427698 24.52747713615385 24.611608391041667 28-29 25.21126518009458 25.29777703039463 24.624929595156956 24.866028194353834 30-31 25.432052741838103 24.323252440363554 24.655320174887656 25.58937464291069 32-33 25.144456555653257 24.58684006856115 25.00167148188519 25.26703189390041 34-35 26.081144873919616 23.77399336269739 24.495567027436614 25.64929473594638 36-37 24.944905632848098 24.296033306888038 25.450912565365986 25.308148494897882 38-39 25.216567639714114 24.60305641243839 24.30004913357748 25.88032681427001 40-41 25.955155097149095 24.045300787870623 24.82349651653191 25.17604759844837 42-43 25.64400894523702 24.52560105559875 24.87738288501622 24.95300711414801 44-45 25.705526538010115 23.855563035784026 24.663832960250605 25.775077465955253 46-47 25.478195772062545 23.859137636909562 24.584459473148907 26.078207117878982 48-49 24.808995206392556 24.544293256938168 24.977966829695244 25.668744706974028 50-51 25.217039390243407 24.55756381008724 24.629893389846305 25.595503409823046 52-53 25.460822490649832 24.554271497283082 23.91130813211393 26.07359787995316 54-55 25.592109795086447 23.729217908560823 24.40500309983913 26.273669196513595 56-57 25.47081363220795 24.23903216084729 24.45055070290914 25.83960350403562 58-59 25.808437076531455 24.548220007345396 24.723699041298868 24.919643874824278 60-61 25.4287989576505 24.864159205512458 24.21152562155459 25.495516215282453 62-63 25.05351507263104 24.15709644062069 25.038163529902324 25.751224956845952 64-65 26.084537389549705 23.4837962317808 24.25900692156021 26.172659457109283 66-67 25.009764452529566 24.412701741694644 23.96594321065331 26.611590595122486 68-69 25.21293666197976 24.4483603269216 25.178595306884073 25.160107704214568 70-71 25.7694894787813 24.033123705867812 24.755305182201656 25.442081633149233 72-73 25.280606352846785 24.287847414977286 25.219825193385386 25.211721038790536 74-75 25.460721188717393 24.110417080316225 25.132452276659627 25.29640945430675 76-77 25.28754553521863 23.52534776953405 24.507470004497804 26.679636690749515 78-79 25.454982043881923 23.0430516231429 25.173570742140623 26.328395590834553 80-81 25.24609870706956 24.353788176720766 24.33169199956213 26.068421116647546 82-83 24.775774356968135 24.73579152576815 24.877834460943767 25.61059965631995 84-85 25.260252929317907 23.581876759655337 25.369283795895438 25.78858651513133 86-87 25.1380515473531 25.01520391490673 24.466443946206525 25.38030059153365 88-89 25.50727516209954 24.00446283579571 24.003753484057068 26.484508518047683 90-91 25.008914570054337 23.910497716654444 24.53345395016755 26.547133763123664 92-93 24.984550985799064 24.155572079528486 25.10424285647714 25.75563407819531 94-95 25.335106792497175 23.886235903836102 25.01838630073707 25.760271002929652 96-97 25.743708136976423 24.398469125197032 24.77708509767532 25.080737640151224 98-99 24.31414341307705 24.576314540519267 24.994035809455887 26.115506236947795 100-101 25.323931014982158 23.96030432539751 24.315830332611405 26.39993432700893 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1.0 1 1.0 2 2.0 3 4.5 4 3.5 5 1.5 6 2.0 7 2.5 8 7.5 9 13.5 10 14.5 11 17.5 12 20.0 13 19.0 14 23.0 15 28.0 16 29.0 17 33.0 18 40.0 19 50.5 20 64.0 21 80.5 22 93.5 23 113.5 24 155.0 25 195.0 26 264.0 27 365.0 28 439.5 29 513.5 30 601.5 31 773.0 32 1078.5 33 1581.5 34 2426.0 35 4124.5 36 7071.5 37 10763.5 38 14257.0 39 17362.0 40 19757.5 41 21519.0 42 22732.0 43 23878.5 44 25491.0 45 28331.0 46 33143.5 47 35597.0 48 38228.0 49 43852.0 50 49272.5 51 51100.0 52 51513.5 53 53981.0 54 57449.0 55 57920.0 56 50138.0 57 43581.0 58 41819.0 59 39832.5 60 34117.5 61 26579.0 62 21639.0 63 15941.0 64 10255.0 65 6695.5 66 5072.5 67 4404.0 68 3340.5 69 2129.5 70 1365.0 71 942.5 72 716.0 73 577.0 74 425.5 75 303.0 76 249.5 77 171.0 78 101.5 79 73.5 80 58.5 81 40.5 82 23.0 83 21.0 84 21.5 85 17.0 86 12.5 87 11.0 88 11.0 89 6.5 90 4.5 91 5.5 92 6.5 93 5.5 94 6.5 95 6.0 96 5.0 97 7.5 98 6.0 99 2.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.13594719332865993 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.035911535048442585 16-17 0.07146851333336035 18-19 0.02264098189937071 20-21 0.03707650727145271 22-23 0.06463063289395309 24-25 0.01646156402079526 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.020766896149310942 38-39 0.004355983094733515 40-41 0.0057742101488327995 42-43 0.003089708939287726 44-45 0.01028214614221981 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 5.065096621783157E-5 58-59 0.013726411845032356 60-61 0.014891384068042482 62-63 0.028009984318460857 64-65 0.045433916697394924 66-67 0.015144638899131639 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01605635629105261 80-81 0.05591866670448606 82-83 0.04806776694072216 84-85 0.027503474656282546 86-87 0.056729082163971364 88-89 0.03358159060242233 90-91 0.0 92-93 0.0030390579730698946 94-95 0.0 96-97 0.0 98-99 6.584625608318104E-4 100-101 0.044674152204127446 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 987148.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.476149637546236 #Duplication Level Percentage of deduplicated Percentage of total 1 74.30141881827113 35.275452780982334 2 14.480244046701241 13.749324662987522 3 5.0176799572723 7.146603734543289 4 2.267481505918935 4.306051651015041 5 1.1588906469869382 2.7509832884952323 6 0.6886222062488581 1.9615878544564802 7 0.41999423025826177 1.3957796245853098 8 0.2872508224837322 1.0910050425396718 9 0.20348020865157088 0.8694411150798997 >10 0.9461967973703918 8.116572268055744 >50 0.0969845347789304 3.292312651878867 >100 0.11188479443652811 11.545295285363606 >500 0.014903572965886193 4.781083488475199 >1k 0.004967857655295397 3.7185065515418594 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 4208 0.42627853168927043 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 2648 0.268247517089636 No Hit GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 2360 0.23907256054816503 No Hit GTCTTGTTCCGGGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCA 2002 0.2028064687361976 No Hit GAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGA 1954 0.19794397597928579 No Hit GTGTAAGATCGTCGTGATCGCCACAGAAGCAGATCTTGGTGACGCTGCCG 1620 0.1641091305457743 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1589 0.16096877064026874 No Hit CGCCTAATGCTTCGTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGA 1559 0.15792971266719882 No Hit GTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCGCC 1555 0.15752450493745618 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1480 0.14992686000478145 No Hit GGTCAGCACCGTCAATGCAGCGCCTTTATTGCAGCCCACCGGCAGCACTT 1466 0.14850863295068217 No Hit ATATACACCAGATTCAGACAGCCAATCACCCGTTGTTCACTGCGCAGCGG 1403 0.14212661120723538 No Hit TCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGC 1305 0.1321990218285404 No Hit CCTTTATTGCAGCCCACCGGCAGCACTTCGAGGCAATCCGTGGCGGAAAA 1268 0.12845085032842088 No Hit ATGTAAAAGTTCACCTTCCAGAGAATGCACGCGCGTTCCGTTGCCGGTAA 1217 0.12328445177420204 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1208 0.12237273438228106 No Hit TGCTGATACAGCACCAGCTCCGCGACATCCGCAGGTAAATCATCACGATG 1138 0.11528159911178466 No Hit ATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCA 1108 0.11224254113871476 No Hit GTACATGGGGGGAATTCGTGGAGAAAGAAATGGCTCGTCTGGCAGCATTT 1049 0.10626572712501064 No Hit GGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTG 1047 0.10606312326013931 No Hit GGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAAT 1046 0.10596182132770364 No Hit GTATCAACGCAGAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTAC 1024 0.10373317881411906 No Hit GCTATAGACAAATGCCTGCAACAACGCAGGGATCTCTTTCCCGGTAAACC 1008 0.10211234789514845 No Hit CTTTATTGGTGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTG 1000 0.10130193243566314 No Hit GAGTACATGGGGGGAATTCCTTCGATTCTGTTTTGCTACCCGTTGTAGCG 999 0.10120063050322747 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.0130193243566314E-4 0.0 6 0.0 0.0 0.0 1.0130193243566314E-4 0.0 7 0.0 0.0 0.0 1.0130193243566314E-4 0.0 8 0.0 0.0 0.0 1.0130193243566314E-4 0.0 9 0.0 0.0 0.0 1.0130193243566314E-4 0.0 10-11 0.0 0.0 0.0 1.0130193243566314E-4 0.0 12-13 0.0 0.0 0.0 1.0130193243566314E-4 0.0 14-15 0.0 0.0 0.0 1.0130193243566314E-4 0.0 16-17 0.0 0.0 0.0 1.5195289865349473E-4 0.0 18-19 0.0 0.0 0.0 2.5325483108915785E-4 0.0 20-21 0.0 0.0 0.0 3.5455676352482096E-4 0.0 22-23 0.0 0.0 0.0 8.104154594853051E-4 0.0 24-25 0.0 0.0 0.0 0.0012156231892279576 0.0 26-27 0.0 0.0 0.0 0.0016208309189706103 0.0 28-29 0.0 0.0 0.0 0.0025325483108915785 0.0 30-31 0.0 0.0 0.0 0.0061794178785754515 0.0 32-33 0.0 0.0 0.0 0.016360262088359598 0.0 34-35 0.0 0.0 0.0 0.025629388906222773 0.0 36-37 0.0 0.0 0.0 0.0441169915757313 0.0 38-39 0.0 0.0 0.0 0.0786102995700746 0.0 40-41 0.0 0.0 0.0 0.11872586481459721 0.0 42-43 0.0 0.0 0.0 0.1601077042145656 0.0 44-45 0.0 0.0 0.0 0.20447795062138607 0.0 46-47 0.0 0.0 0.0 0.25695235162305957 0.0 48-49 0.0 0.0 0.0 0.31515031180734804 0.0 50-51 0.0 0.0 0.0 0.37486780097817146 0.0 52-53 0.0 0.0 0.0 0.4424868408789766 0.0 54-55 0.0 0.0 0.0 0.5110175981717027 0.0 56-57 0.0 0.0 0.0 0.5892226900120346 0.0 58-59 0.0 0.0 0.0 0.6777605789608042 0.0 60-61 0.0 0.0 0.0 0.7792651152613388 0.0 62-63 0.0 0.0 0.0 0.8951545259677374 0.0 64-65 0.0 0.0 0.0 1.0022813195184512 0.0 66-67 0.0 0.0 0.0 1.1219189017249693 0.0 68-69 0.0 0.0 0.0 1.2671352218714924 0.0 70-71 0.0 0.0 0.0 1.4231401978224136 0.0 72-73 0.0 0.0 0.0 1.59748082354419 5.065096621783157E-5 74-75 0.0 0.0 0.0 1.7723786098943624 1.0130193243566314E-4 76-77 0.0 0.0 0.0 1.9471750943120991 1.0130193243566314E-4 78-79 0.0 0.0 0.0 2.1438527961359393 1.0130193243566314E-4 80-81 0.0 0.0 0.0 2.3753783627176475 1.0130193243566314E-4 82-83 0.0 0.0 0.0 2.6293929583000724 1.0130193243566314E-4 84-85 0.0 0.0 0.0 2.886699866686657 1.0130193243566314E-4 86-87 0.0 0.0 0.0 3.1605696410264725 1.0130193243566314E-4 88-89 0.0 0.0 0.0 3.4549024057182915 1.0130193243566314E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 725 0.0 51.148407 1 GTATCAA 1540 0.0 46.306934 1 GCGTAAT 50 0.0016087407 38.03343 1 AAACCGT 125 1.3460522E-10 37.991047 6 ATCAACG 2060 0.0 34.348698 3 TCAACGC 2170 0.0 32.60752 4 GTACATG 4760 0.0 31.561352 1 TACATGG 4840 0.0 30.808853 2 TCGCACC 1320 0.0 30.614027 1 CGCACCA 1370 0.0 30.157125 2 AAATGCG 300 0.0 30.076244 6 ACATGGG 4870 0.0 29.741447 3 CATGGGG 3925 0.0 27.46486 4 GCCCATA 1060 0.0 27.358952 1 CGCAGAG 2610 0.0 27.29242 8 TATCACG 70 0.008400658 27.136461 2 AATGCGG 315 0.0 27.13646 7 ACCGTGC 195 5.366019E-10 26.788557 8 TATCAAC 2645 0.0 26.751728 2 ACGCAGA 2710 0.0 26.285316 7 >>END_MODULE