##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3224562_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 972031 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17642750076901 34.0 31.0 34.0 31.0 34.0 2 32.34780269353549 34.0 31.0 34.0 31.0 34.0 3 32.48768094844712 34.0 31.0 34.0 31.0 34.0 4 35.77281074369027 37.0 37.0 37.0 35.0 37.0 5 35.78285980591154 37.0 37.0 37.0 35.0 37.0 6 35.880431796928285 37.0 37.0 37.0 35.0 37.0 7 35.851588066635735 37.0 37.0 37.0 35.0 37.0 8 35.88389464945048 37.0 37.0 37.0 35.0 37.0 9 37.61681674761402 39.0 38.0 39.0 35.0 39.0 10-11 37.67852054101155 39.0 38.5 39.0 35.0 39.0 12-13 37.68454298268265 39.0 39.0 39.0 35.0 39.0 14-15 39.164760177401746 41.0 40.0 41.0 36.0 41.0 16-17 39.002761743195435 41.0 39.5 41.0 36.0 41.0 18-19 39.08441706077275 41.0 39.5 41.0 36.0 41.0 20-21 39.14726793692794 41.0 40.0 41.0 36.0 41.0 22-23 39.103727658891536 41.0 40.0 41.0 36.0 41.0 24-25 39.04196213906758 41.0 39.5 41.0 36.0 41.0 26-27 38.87371596173373 41.0 39.0 41.0 35.0 41.0 28-29 38.7936516427974 41.0 39.0 41.0 35.0 41.0 30-31 38.72719234263104 41.0 39.0 41.0 35.0 41.0 32-33 38.54245492170517 40.5 39.0 41.0 35.0 41.0 34-35 38.55169845406165 40.0 39.0 41.0 35.0 41.0 36-37 38.55962721353537 40.0 39.0 41.0 35.0 41.0 38-39 38.4582024647362 40.0 38.5 41.0 34.5 41.0 40-41 38.373635717379386 40.0 38.0 41.0 34.0 41.0 42-43 38.23563446021784 40.0 38.0 41.0 34.0 41.0 44-45 38.08028704845833 40.0 38.0 41.0 33.0 41.0 46-47 37.927145842056476 40.0 38.0 41.0 33.0 41.0 48-49 37.732024493046 40.0 37.0 41.0 33.0 41.0 50-51 36.44239689886433 38.5 35.5 40.0 31.0 40.5 52-53 36.78514728439731 39.0 36.0 40.0 31.5 40.5 54-55 37.27445318101995 40.0 36.0 41.0 32.0 41.0 56-57 37.133172707454804 39.5 35.5 41.0 32.0 41.0 58-59 36.99517762293589 39.0 35.0 41.0 32.0 41.0 60-61 36.750846938009175 39.0 35.0 41.0 31.5 41.0 62-63 36.46139063466083 38.5 35.0 41.0 31.0 41.0 64-65 36.20590701325369 38.0 35.0 41.0 31.0 41.0 66-67 35.951670265660255 37.0 35.0 40.0 31.0 41.0 68-69 35.631071951408956 37.0 35.0 40.0 30.0 41.0 70-71 35.31206309263799 36.0 35.0 39.0 30.0 41.0 72-73 34.95749621154057 35.5 35.0 39.0 29.5 41.0 74-75 34.658133331138615 35.0 34.0 38.5 29.0 40.0 76-77 34.2940698393364 35.0 34.0 37.0 29.0 39.0 78-79 34.027516612124515 35.0 34.0 37.0 29.0 39.0 80-81 33.70548881671469 35.0 34.0 36.5 29.0 38.5 82-83 33.43440949928552 35.0 34.0 36.0 29.0 37.0 84-85 33.21150199942183 35.0 34.0 35.5 28.5 37.0 86-87 32.97581095664644 35.0 34.0 35.0 27.5 36.5 88-89 32.83043133398009 35.0 33.5 35.0 27.0 36.0 90-91 32.6663568342985 35.0 33.0 35.0 27.0 36.0 92-93 32.528354033976285 35.0 33.0 35.0 27.0 36.0 94-95 32.40596956269913 35.0 33.0 35.0 26.0 35.0 96-97 32.27421964937332 35.0 33.0 35.0 25.5 35.0 98-99 32.23284133942231 35.0 33.0 35.0 25.0 35.0 100-101 30.983274710374463 34.0 31.0 35.0 22.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 4.0 7 175.0 8 580.0 9 505.0 10 560.0 11 1061.0 12 1593.0 13 1935.0 14 2037.0 15 2012.0 16 2099.0 17 2274.0 18 2517.0 19 2834.0 20 3274.0 21 4005.0 22 4548.0 23 4767.0 24 4975.0 25 5236.0 26 5386.0 27 5999.0 28 6690.0 29 7688.0 30 9191.0 31 11834.0 32 15720.0 33 22467.0 34 36227.0 35 62885.0 36 132910.0 37 239702.0 38 300169.0 39 68160.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.68717978304834 18.80148068627522 13.71520176050425 24.796137770172187 2 15.95576684282703 21.0324567837857 37.79663405796729 25.215142315419982 3 19.66110134347567 26.285067040042964 28.518226270561332 25.535605345920036 4 13.391033825052906 18.180387251023888 38.72757144576664 29.701007478156562 5 14.746649026625693 38.02347867506283 33.28669558892669 13.943176709384783 6 28.97191550475242 36.92063318968222 20.375996238803083 13.731455066762274 7 27.415072153048612 31.420397086101165 22.242603373760712 18.921927387089507 8 26.05071237439958 33.280522946284634 21.59653344389222 19.072231235423562 9 27.745925798662803 15.58715719971894 19.905743746855812 36.761173254762454 10-11 25.842745756050988 25.02538499286545 27.917576702800627 21.214292548282927 12-13 26.792818336040725 22.78034342526113 27.50133483397135 22.925503404726804 14-15 24.0062120430891 24.18091289040108 25.087247507103815 26.725627559406007 16-17 23.740477231065267 26.69644148686721 25.892459567966537 23.67062171410098 18-19 23.681738103176464 26.445863844605526 26.50909884211523 23.36329921010278 20-21 25.12919132048402 25.18903975933003 25.819017909246504 23.86275101093945 22-23 25.023922435203527 25.7048174817281 25.325970525089087 23.945289557979287 24-25 24.162751920416483 25.597887348942926 25.883576792735987 24.355783937904604 26-27 24.012351457926755 26.43238744443336 25.983636324355913 23.57162477328398 28-29 23.78051728802888 26.525388593573663 26.07267669446756 23.621417423929895 30-31 24.209515951651746 25.84922703082515 25.97247412891153 23.968782888611578 32-33 23.928557834060847 25.88055319223358 26.290108031533975 23.900780942171597 34-35 24.417276815245604 25.73487882588107 26.000096704734727 23.8477476541386 36-37 23.69096809013645 26.006531075085753 26.48866991728368 23.813830917494112 38-39 23.78906973394514 26.028467663943704 25.932683800078195 24.249778802032964 40-41 24.370157705565866 25.510779916447994 26.28858210057003 23.830480277416115 42-43 24.243488906835942 25.776624365351676 26.364487471643372 23.615399256169013 44-45 24.200764779993282 25.72312247952107 25.897366380855907 24.17874635962974 46-47 24.20915588083096 25.52701508490984 25.770988785337096 24.4928402489221 48-49 23.7737788198113 25.82741702682322 26.040424636662824 24.35837951670266 50-51 23.723523220967234 26.1065233516215 25.934769570106305 24.23518385730496 52-53 24.21810621266194 25.883639513554606 25.410403577663676 24.48785069611977 54-55 23.984626004726188 25.50546227435133 25.948246506541455 24.561665214381023 56-57 23.964371488343218 25.802071025549093 25.862562954557493 24.370994531550195 58-59 24.372834722232227 25.895667438029456 25.912542070826127 23.818955768912193 60-61 24.064731545695885 25.97874179408557 25.81781326528512 24.138713394933426 62-63 23.755106871250245 25.663713171354186 26.296193387051957 24.284986570343612 64-65 24.507712584329454 25.32598296659553 25.80773322121142 24.3585712278636 66-67 23.812478391860523 25.72294660937423 25.57060922605818 24.89396577270707 68-69 23.86179041614928 25.83868209964497 26.421122371611606 23.878405112594145 70-71 24.137810419626536 25.474701938518425 26.24232148974673 24.14516615210832 72-73 24.156636979684805 25.353769581422814 26.290931050552913 24.198662388339468 74-75 24.076752696158866 25.278463341189735 26.355075095341608 24.289708867309788 76-77 23.85597784432801 25.153107256867322 25.73261552357898 25.258299375225686 78-79 24.04003018933156 24.762917540629296 26.340088890809593 24.856963379229555 80-81 23.698059680060034 25.621703749034317 26.063048174223734 24.617188396681914 82-83 23.669521270573217 25.706926188589136 26.220754891768657 24.402797649068994 84-85 23.65304416058864 25.012361877564672 26.63831538867235 24.69627857317434 86-87 23.81746488848262 25.707750500416648 26.02820244780818 24.446582163292554 88-89 23.971995126007524 25.359683355151034 25.864938128288095 24.803383390553346 90-91 23.64976014139467 25.231139747600643 26.131728309076564 24.987371801928127 92-93 23.66944840680519 25.056906244743406 26.535825599656786 24.737819748794617 94-95 23.88498926474567 24.872714964851944 26.548690319547426 24.693605450854964 96-97 23.83725416164711 25.639665813127362 26.133425785803126 24.389654239422406 98-99 23.23325485419289 25.441695931310093 26.49954399109895 24.825505223398068 100-101 23.907078234198256 24.87355517358502 26.16620521424087 25.05316137797585 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.0 2 2.5 3 2.5 4 1.0 5 1.5 6 3.0 7 4.0 8 9.5 9 10.0 10 8.5 11 10.0 12 11.5 13 14.0 14 16.0 15 22.0 16 28.5 17 29.5 18 34.5 19 48.0 20 52.0 21 59.0 22 76.0 23 91.0 24 116.5 25 152.0 26 196.0 27 242.0 28 318.0 29 403.0 30 502.5 31 664.0 32 939.5 33 1457.5 34 2614.0 35 5090.0 36 9976.0 37 17361.0 38 26964.5 39 36348.0 40 43354.0 41 47015.0 42 46809.0 43 44857.5 44 41653.0 45 39329.5 46 38855.0 47 38007.5 48 38975.5 49 41881.5 50 44439.5 51 44016.5 52 42258.5 53 41264.0 54 41489.5 55 41318.0 56 35295.5 57 29141.5 58 26689.5 59 24356.0 60 20018.5 61 15450.5 62 12180.5 63 8728.0 64 5670.5 65 3778.5 66 2983.0 67 2508.0 68 1857.0 69 1228.0 70 794.0 71 532.0 72 378.5 73 264.0 74 197.5 75 154.0 76 113.5 77 69.0 78 45.5 79 33.0 80 25.5 81 16.5 82 12.5 83 14.0 84 12.0 85 11.5 86 9.5 87 8.0 88 10.5 89 7.0 90 4.0 91 4.0 92 3.5 93 4.0 94 2.5 95 3.5 96 5.5 97 4.5 98 1.5 99 0.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14402832831463194 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.03806462962600987 16-17 0.07618069794070353 18-19 0.02664524073820691 20-21 0.042179724720713636 22-23 0.06815626250603118 24-25 0.01764347021854241 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.02217007482271656 38-39 0.005246746245747306 40-41 0.006326958708107047 42-43 0.003703585585233393 44-45 0.012088091840692324 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 5.143868868379713E-5 58-59 0.01625462562407989 60-61 0.017592031529858616 62-63 0.030966090587645864 64-65 0.048300928674085496 66-67 0.018003541039328993 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.01692332857696925 80-81 0.05838291165610974 82-83 0.051541566061164716 84-85 0.030194510257388913 86-87 0.060749091335564394 88-89 0.03528694043708482 90-91 0.0 92-93 0.0038579016512847843 94-95 0.0 96-97 0.0 98-99 0.0010802124623597396 100-101 0.04742647096646095 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 972031.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.010801663121576 #Duplication Level Percentage of deduplicated Percentage of total 1 76.36184992275949 42.77088430652738 2 13.888456964645094 15.558072169070716 3 4.579150908722412 7.69445740001862 4 1.90644883537913 4.271269103972383 5 0.9724448639839696 2.723370820246368 6 0.5696518766573183 1.9143994968286833 7 0.3525349577787239 1.382203591962273 8 0.23591387043673892 1.0570980005289237 9 0.169737581366058 0.8556424204205011 >10 0.8111273935678817 8.12090821749885 >50 0.07486435325063011 2.985601882616664 >100 0.0715188810879744 7.880588030620091 >500 0.005187897947408339 1.9998015299428902 >1k 0.0011116924173017867 0.7857030297455954 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCCCATAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCA 1779 0.18301885433695017 No Hit TAATAAATCCGCTACCGACGCTGACTAACATTTCGCGATCGTTCATCGCA 1550 0.1594599349197711 No Hit ACCAAAGGCCGTGCAATCGCGCAACGATAAACCTAAATGTTGGGTCAGCA 1185 0.12190969218059917 No Hit TCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATG 1028 0.10575794393388688 No Hit GTATAGCTGGATCTGCAAGCGTGTAAGATCGTCGTGATCGCCACAGAAGC 1015 0.10442053802810816 No Hit GACTAACATTTCGCGATCGTTCATCGCATCACCAAAGGCCGTGCAATCGC 1014 0.10431766065074055 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.0287737736759424E-4 0.0 8 0.0 0.0 0.0 1.0287737736759424E-4 0.0 9 0.0 0.0 0.0 1.0287737736759424E-4 0.0 10-11 0.0 0.0 0.0 1.0287737736759424E-4 0.0 12-13 0.0 0.0 0.0 1.0287737736759424E-4 1.0287737736759424E-4 14-15 0.0 0.0 0.0 1.0287737736759424E-4 1.0287737736759424E-4 16-17 0.0 0.0 1.0287737736759424E-4 1.0287737736759424E-4 1.0287737736759424E-4 18-19 0.0 0.0 1.0287737736759424E-4 1.5431606605139137E-4 1.0287737736759424E-4 20-21 0.0 0.0 1.0287737736759424E-4 3.6007082078657986E-4 1.0287737736759424E-4 22-23 0.0 0.0 1.0287737736759424E-4 5.658255755217683E-4 2.0575475473518849E-4 24-25 0.0 0.0 1.0287737736759424E-4 6.172642642055655E-4 2.0575475473518849E-4 26-27 0.0 0.0 1.0287737736759424E-4 0.0010802124623597396 2.0575475473518849E-4 28-29 0.0 0.0 1.0287737736759424E-4 0.001954670169984291 2.0575475473518849E-4 30-31 0.0 0.0 1.0287737736759424E-4 0.006069765264688061 2.0575475473518849E-4 32-33 0.0 0.0 1.0287737736759424E-4 0.018723682680902153 2.0575475473518849E-4 34-35 0.0 0.0 1.0287737736759424E-4 0.03348658633315192 2.0575475473518849E-4 36-37 0.0 0.0 1.0287737736759424E-4 0.05812571821269075 2.0575475473518849E-4 38-39 0.0 0.0 1.0287737736759424E-4 0.1052949957357327 2.0575475473518849E-4 40-41 0.0 0.0 1.0287737736759424E-4 0.1643980490334156 2.0575475473518849E-4 42-43 0.0 0.0 1.0287737736759424E-4 0.22473563085950962 2.0575475473518849E-4 44-45 0.0 0.0 1.0287737736759424E-4 0.2947436861581575 2.0575475473518849E-4 46-47 0.0 0.0 1.0287737736759424E-4 0.37581105952382177 2.0575475473518849E-4 48-49 0.0 0.0 1.0287737736759424E-4 0.46546869389968015 2.0575475473518849E-4 50-51 0.0 0.0 1.0287737736759424E-4 0.5618133578044322 2.0575475473518849E-4 52-53 0.0 0.0 1.0287737736759424E-4 0.6621188007378366 2.5719344341898563E-4 54-55 0.0 0.0 1.0287737736759424E-4 0.7596979931709997 3.0863213210278274E-4 56-57 0.0 0.0 1.0287737736759424E-4 0.8767724486153219 3.0863213210278274E-4 58-59 0.0 0.0 1.0287737736759424E-4 1.0060893119663878 3.0863213210278274E-4 60-61 0.0 0.0 1.0287737736759424E-4 1.1550557543946645 3.0863213210278274E-4 62-63 0.0 0.0 1.0287737736759424E-4 1.3013473850113835 4.1150950947037697E-4 64-65 0.0 0.0 1.0287737736759424E-4 1.4443469395523394 4.629481981541741E-4 66-67 0.0 0.0 1.0287737736759424E-4 1.6148661925391268 5.143868868379713E-4 68-69 0.0 0.0 1.0287737736759424E-4 1.801228561640524 5.143868868379713E-4 70-71 0.0 0.0 1.0287737736759424E-4 2.013876100659341 6.172642642055655E-4 72-73 0.0 0.0 1.0287737736759424E-4 2.2388689249622695 6.687029528893627E-4 74-75 0.0 0.0 1.0287737736759424E-4 2.4636045558217794 7.201416415731597E-4 76-77 0.0 0.0 1.0287737736759424E-4 2.7006340332767165 7.201416415731597E-4 78-79 0.0 0.0 1.0287737736759424E-4 2.971047219687438 7.201416415731597E-4 80-81 0.0 0.0 1.0287737736759424E-4 3.277827558997604 7.201416415731597E-4 82-83 0.0 0.0 1.0287737736759424E-4 3.602457123281048 7.201416415731597E-4 84-85 0.0 0.0 1.0287737736759424E-4 3.931921924300768 7.201416415731597E-4 86-87 0.0 0.0 1.0287737736759424E-4 4.280316162756126 7.201416415731597E-4 88-89 0.0 0.0 1.0287737736759424E-4 4.661682600657798 7.201416415731597E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 795 0.0 49.646706 1 GTATCAA 1420 0.0 45.878757 1 ATCAACG 1800 0.0 36.13925 3 TCAACGC 1835 0.0 35.449947 4 AATGCGG 405 0.0 35.17202 7 AAATGCG 440 0.0 31.295105 6 ATGCGGG 445 0.0 30.946657 8 CCGTGCG 125 2.149718E-7 30.405828 9 TATCAAC 2170 0.0 29.97726 2 CGCAGAG 2290 0.0 27.994589 8 ACGCAGA 2325 0.0 27.366102 7 GTACATG 4010 0.0 25.258913 1 TACATGG 4070 0.0 24.499432 2 ACATGGG 4215 0.0 23.206024 3 TACCGTC 150 3.0413665E-5 22.158371 7 CAACGCA 2920 0.0 22.11501 5 AGACCGC 545 0.0 21.78084 6 GCAGAGT 2935 0.0 21.690699 9 AACGCAG 3030 0.0 21.62557 6 TATACGG 110 0.0028833044 21.58283 3 >>END_MODULE